RNA–Protein interactions for RNA: ENST00000416784.5

LPP-203, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 3

Gene LPP, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-203ENST00000416784 SF3B2Q13435 895 aaKnown RBP12.09□□□□□ -0.47
LPP-203ENST00000416784 ERICH6BQ5W0A0 696 aa12.09□□□□□ -0.47
LPP-203ENST00000416784 SEPT12Q8IYM1 358 aa12.09□□□□□ -0.47
LPP-203ENST00000416784 PPP2R1AP30153 589 aa12.08□□□□□ -0.48
LPP-203ENST00000416784 FKBP8Q14318 412 aa12.08□□□□□ -0.48
LPP-203ENST00000416784 CHRNA2Q15822 529 aa12.08□□□□□ -0.48
LPP-203ENST00000416784 USP6P35125 1406 aa12.08□□□□□ -0.48
LPP-203ENST00000416784 NRKQ7Z2Y5 1582 aa12.08□□□□□ -0.48
LPP-203ENST00000416784 BRWD3Q6RI45 1802 aa12.07□□□□□ -0.48
LPP-203ENST00000416784 NLRP6P59044 892 aa12.07□□□□□ -0.48
LPP-203ENST00000416784 PDE3BQ13370 1112 aa12.07□□□□□ -0.48
LPP-203ENST00000416784 FAM98CQ17RN3 349 aaKnown RBP12.07□□□□□ -0.48
LPP-203ENST00000416784 SMG6Q86US8 1419 aaKnown RBP12.06□□□□□ -0.48
LPP-203ENST00000416784 KRT27Q7Z3Y8 459 aa12.06□□□□□ -0.48
LPP-203ENST00000416784 CCDC125Q86Z20 511 aa12.06□□□□□ -0.48
LPP-203ENST00000416784 ZNF692Q9BU19 519 aaPredicted RBP12.06□□□□□ -0.48
LPP-203ENST00000416784 AKAP12Q02952 1782 aa12.05□□□□□ -0.48
LPP-203ENST00000416784 USP35Q9P2H5 1018 aa12.05□□□□□ -0.48
LPP-203ENST00000416784 NUDCQ9Y266 331 aa12.05□□□□□ -0.48
LPP-203ENST00000416784 WDR43Q15061 677 aaKnown RBP eCLIP12.04□□□□□ -0.48
LPP-203ENST00000416784 CGNL1Q0VF96 1302 aa12.04□□□□□ -0.48
LPP-203ENST00000416784 SPATA31A5Q5VU36 1347 aa12.04□□□□□ -0.48
LPP-203ENST00000416784 SPATA31A7Q8IWB4 1347 aa12.04□□□□□ -0.48
LPP-203ENST00000416784 NSD2O96028 1365 aa12.04□□□□□ -0.48
LPP-203ENST00000416784 SOX12O15370 315 aa12.03□□□□□ -0.48
LPP-203ENST00000416784 GCP02774 474 aa12.03□□□□□ -0.48
LPP-203ENST00000416784 HDGFL2Q7Z4V5 671 aaPredicted RBP12.03□□□□□ -0.48
LPP-203ENST00000416784 CARD14Q9BXL6 1004 aa12.03□□□□□ -0.48
LPP-203ENST00000416784 USP19O94966 1318 aa12.03□□□□□ -0.48
LPP-203ENST00000416784 MYOM1P52179 1685 aa12.03□□□□□ -0.48
LPP-203ENST00000416784 ANKRD36BQ8N2N9 1353 aa12.03□□□□□ -0.48
LPP-203ENST00000416784 BLMP54132 1417 aaPredicted RBP12.03□□□□□ -0.48
LPP-203ENST00000416784 KCNH5Q8NCM2 988 aa12.02□□□□□ -0.49
LPP-203ENST00000416784 SLC12A5Q9H2X9 1139 aa12.02□□□□□ -0.49
LPP-203ENST00000416784 TERF2IPQ9NYB0 399 aa12.02□□□□□ -0.49
LPP-203ENST00000416784 PIK3C2AO00443 1686 aa12.02□□□□□ -0.49
LPP-203ENST00000416784 TTC21AQ8NDW8 1320 aa12.02□□□□□ -0.49
LPP-203ENST00000416784 CPDO75976 1380 aa12.02□□□□□ -0.49
LPP-203ENST00000416784 SSH2Q76I76 1423 aa12.02□□□□□ -0.49
LPP-203ENST00000416784 MON2Q7Z3U7 1717 aa12.01□□□□□ -0.49
LPP-203ENST00000416784 ONECUT3O60422 494 aaPredicted RBP12.01□□□□□ -0.49
LPP-203ENST00000416784 MORC1Q86VD1 984 aa12.01□□□□□ -0.49
LPP-203ENST00000416784 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.01□□□□□ -0.498e-7■■■□□ 15
LPP-203ENST00000416784 SPATA31A1Q5TZJ5 1347 aa12.01□□□□□ -0.49
LPP-203ENST00000416784 TTC21BQ7Z4L5 1316 aa12.01□□□□□ -0.49
LPP-203ENST00000416784 NSD3Q9BZ95 1437 aa12.01□□□□□ -0.49
LPP-203ENST00000416784 NGEFQ8N5V2 710 aa12□□□□□ -0.49
LPP-203ENST00000416784 ZRANB1Q9UGI0 708 aa12□□□□□ -0.49
LPP-203ENST00000416784 SLIT3O75094 1523 aa12□□□□□ -0.49
LPP-203ENST00000416784 CSB-PGBD3P0DP91 1061 aa11.99□□□□□ -0.49
LPP-203ENST00000416784 BAG6P46379 1132 aa11.99□□□□□ -0.49
LPP-203ENST00000416784 LMO7Q8WWI1 1683 aa11.99□□□□□ -0.49
LPP-203ENST00000416784 THSD7AQ9UPZ6 1657 aa11.99□□□□□ -0.49
LPP-203ENST00000416784 CAMTA1Q9Y6Y1 1673 aa11.99□□□□□ -0.49
LPP-203ENST00000416784 RGPD1P0DJD0 1748 aa11.98□□□□□ -0.49
LPP-203ENST00000416784 COL5A2P05997 1499 aaPredicted RBP11.98□□□□□ -0.49
LPP-203ENST00000416784 CPSF1Q10570 1443 aaKnown RBP11.98□□□□□ -0.49
LPP-203ENST00000416784 LARP1Q6PKG0 1096 aaKnown RBP11.98□□□□□ -0.49
LPP-203ENST00000416784 TOM1L2Q6ZVM7 507 aa11.98□□□□□ -0.49
LPP-203ENST00000416784 TCP11L2Q8N4U5 519 aa11.98□□□□□ -0.49
LPP-203ENST00000416784 CRB1P82279 1406 aa11.97□□□□□ -0.49
LPP-203ENST00000416784 CFAP53Q96M91 514 aa11.97□□□□□ -0.49
LPP-203ENST00000416784 ADAMTS8Q9UP79 889 aa11.97□□□□□ -0.49
LPP-203ENST00000416784 THRAP3Q9Y2W1 955 aaKnown RBP11.97□□□□□ -0.49
LPP-203ENST00000416784 AATKQ6ZMQ8 1374 aa11.96□□□□□ -0.49
LPP-203ENST00000416784 FAM182BQ5T319 152 aa11.96□□□□□ -0.49
LPP-203ENST00000416784 BARGINQ6ZT62 677 aa11.96□□□□□ -0.49
LPP-203ENST00000416784 DEFB132Q7Z7B7 95 aa11.96□□□□□ -0.49
LPP-203ENST00000416784 EDC4Q6P2E9 1401 aaKnown RBP11.95□□□□□ -0.5
LPP-203ENST00000416784 FAM196AQ6ZSG2 479 aa11.95□□□□□ -0.5
LPP-203ENST00000416784 A0A1W2PP64 1363 aa11.94□□□□□ -0.5
LPP-203ENST00000416784 SLC4A2P04920 1241 aa11.94□□□□□ -0.5
LPP-203ENST00000416784 ATXN8OSP0DMR3 200 aa11.94□□□□□ -0.5
LPP-203ENST00000416784 NME9Q86XW9 330 aa11.94□□□□□ -0.5
LPP-203ENST00000416784 RGPD5Q99666 1765 aa11.94□□□□□ -0.5
LPP-203ENST00000416784 RNF123Q5XPI4 1314 aa11.93□□□□□ -0.5
LPP-203ENST00000416784 LTN1O94822 1766 aa11.93□□□□□ -0.5
LPP-203ENST00000416784 PPP4R2Q9NY27 417 aa11.93□□□□□ -0.5
LPP-203ENST00000416784 WDR17Q8IZU2 1322 aa11.92□□□□□ -0.5
LPP-203ENST00000416784 PARP4Q9UKK3 1724 aaKnown RBP11.92□□□□□ -0.5
LPP-203ENST00000416784 CD163L1Q9NR16 1453 aa11.92□□□□□ -0.5
LPP-203ENST00000416784 TRIM37O94972 964 aa11.92□□□□□ -0.5
LPP-203ENST00000416784 MYCNP04198 464 aaPredicted RBP11.92□□□□□ -0.5
LPP-203ENST00000416784 ARHGEF25Q86VW2 580 aa11.92□□□□□ -0.5
LPP-203ENST00000416784 COL18A1P39060 1754 aa11.92□□□□□ -0.5
LPP-203ENST00000416784 USP31Q70CQ4 1352 aa11.92□□□□□ -0.5
LPP-203ENST00000416784 NFAT5O94916 1531 aa11.91□□□□□ -0.5
LPP-203ENST00000416784 USP54Q70EL1 1684 aa11.91□□□□□ -0.5
LPP-203ENST00000416784 WNK3Q9BYP7 1800 aa11.91□□□□□ -0.5
LPP-203ENST00000416784 DDB1Q16531 1140 aa11.91□□□□□ -0.5
LPP-203ENST00000416784 COG3Q96JB2 828 aa11.91□□□□□ -0.5
LPP-203ENST00000416784 ABCC6O95255 1503 aa11.91□□□□□ -0.5
LPP-203ENST00000416784 APBA3O96018 575 aa11.9□□□□□ -0.5
LPP-203ENST00000416784 EN1Q05925 392 aaPredicted RBP11.9□□□□□ -0.5
LPP-203ENST00000416784 CDCA7Q9BWT1 371 aaPredicted RBP11.9□□□□□ -0.5
LPP-203ENST00000416784 TNS1Q9HBL0 1735 aaKnown RBP11.9□□□□□ -0.5
LPP-203ENST00000416784 AXIN2Q9Y2T1 843 aa11.9□□□□□ -0.5
LPP-203ENST00000416784 SALL2Q9Y467 1007 aaPredicted RBP11.9□□□□□ -0.5
LPP-203ENST00000416784 LRRC37A3O60309 1634 aa11.89□□□□□ -0.51
LPP-203ENST00000416784 OVOS2A0A0G2JMS6 1433 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms