RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 ZNF445P59923 1031 aa18.15■□□□□ 0.5
NCKIPSD-204ENST00000416649 FAM177BA6PVY3 158 aa18.14■□□□□ 0.49
NCKIPSD-204ENST00000416649 FOXD4L5Q5VV16 416 aaPredicted RBP18.14■□□□□ 0.49
NCKIPSD-204ENST00000416649 FOXD4L4Q8WXT5 416 aaPredicted RBP18.14■□□□□ 0.49
NCKIPSD-204ENST00000416649 PPLO60437 1756 aa18.14■□□□□ 0.49
NCKIPSD-204ENST00000416649 DMTNQ08495 405 aa18.14■□□□□ 0.49
NCKIPSD-204ENST00000416649 HDAC1Q13547 482 aaPredicted RBP18.14■□□□□ 0.49
NCKIPSD-204ENST00000416649 CLTCQ00610 1675 aaKnown RBP18.14■□□□□ 0.49
NCKIPSD-204ENST00000416649 NUTM2FA1L443 756 aa18.13■□□□□ 0.49
NCKIPSD-204ENST00000416649 PKP1Q13835 747 aa18.13■□□□□ 0.49
NCKIPSD-204ENST00000416649 MORC1Q86VD1 984 aa18.13■□□□□ 0.49
NCKIPSD-204ENST00000416649 DDX19BQ9UMR2 479 aa18.13■□□□□ 0.49
NCKIPSD-204ENST00000416649 IFT172Q9UG01 1749 aa18.13■□□□□ 0.49
NCKIPSD-204ENST00000416649 CHAMP1Q96JM3 812 aa18.13■□□□□ 0.49
NCKIPSD-204ENST00000416649 ARHGAP31Q2M1Z3 1444 aa18.13■□□□□ 0.49
NCKIPSD-204ENST00000416649 PIK3C2BO00750 1634 aa18.13■□□□□ 0.49
NCKIPSD-204ENST00000416649 SYCE3A1L190 88 aa18.12■□□□□ 0.49
NCKIPSD-204ENST00000416649 ANKRD45Q5TZF3 282 aa18.12■□□□□ 0.49
NCKIPSD-204ENST00000416649 NRXN1Q9ULB1 1477 aa18.12■□□□□ 0.49
NCKIPSD-204ENST00000416649 NEXMIFQ5QGS0 1516 aa18.12■□□□□ 0.49
NCKIPSD-204ENST00000416649 ZSCAN20P17040 1043 aaPredicted RBP18.12■□□□□ 0.49
NCKIPSD-204ENST00000416649 PDLIM2Q96JY6 352 aa18.12■□□□□ 0.49
NCKIPSD-204ENST00000416649 NSD3Q9BZ95 1437 aa18.11■□□□□ 0.49
NCKIPSD-204ENST00000416649 EVC2Q86UK5 1308 aa18.11■□□□□ 0.49
NCKIPSD-204ENST00000416649 WDR63Q8IWG1 891 aa18.11■□□□□ 0.49
NCKIPSD-204ENST00000416649 TMEM57Q8N5G2 664 aa18.11■□□□□ 0.49
NCKIPSD-204ENST00000416649 CCDC39Q9UFE4 941 aa18.11■□□□□ 0.49
NCKIPSD-204ENST00000416649 PREX1Q8TCU6 1659 aa18.11■□□□□ 0.49
NCKIPSD-204ENST00000416649 IBTKQ9P2D0 1353 aaPredicted RBP18.11■□□□□ 0.49
NCKIPSD-204ENST00000416649 EXOSC9Q06265 439 aaKnown RBP18.11■□□□□ 0.49
NCKIPSD-204ENST00000416649 TXNDC2Q86VQ3 553 aa18.11■□□□□ 0.49
NCKIPSD-204ENST00000416649 BBXQ8WY36 941 aaPredicted RBP18.11■□□□□ 0.49
NCKIPSD-204ENST00000416649 CHD1LQ86WJ1 897 aa18.1■□□□□ 0.49
NCKIPSD-204ENST00000416649 LMBRD1Q9NUN5 540 aa18.1■□□□□ 0.49
NCKIPSD-204ENST00000416649 ADGRB1O14514 1584 aa18.1■□□□□ 0.49
NCKIPSD-204ENST00000416649 TBC1D9Q6ZT07 1266 aa18.1■□□□□ 0.49
NCKIPSD-204ENST00000416649 NOB1Q9ULX3 412 aaKnown RBP18.1■□□□□ 0.49
NCKIPSD-204ENST00000416649 SSH1Q8WYL5 1049 aa18.09■□□□□ 0.49
NCKIPSD-204ENST00000416649 KIF16BQ96L93 1317 aa18.09■□□□□ 0.49
NCKIPSD-204ENST00000416649 U2SURPO15042 1029 aaKnown RBP18.09■□□□□ 0.49
NCKIPSD-204ENST00000416649 GGNBP2Q9H3C7 697 aa18.09■□□□□ 0.49
NCKIPSD-204ENST00000416649 U2AF1L5P0DN76 240 aaPredicted RBP18.08■□□□□ 0.49
NCKIPSD-204ENST00000416649 FBLN1P23142 703 aa18.08■□□□□ 0.49
NCKIPSD-204ENST00000416649 U2AF1Q01081 240 aaKnown RBP eCLIP18.08■□□□□ 0.49
NCKIPSD-204ENST00000416649 NUCB1Q02818 461 aa18.08■□□□□ 0.49
NCKIPSD-204ENST00000416649 IGSF3O75054 1194 aa18.08■□□□□ 0.48
NCKIPSD-204ENST00000416649 ATF7IPQ6VMQ6 1270 aa18.08■□□□□ 0.48
NCKIPSD-204ENST00000416649 KDM5AP29375 1690 aaKnown RBP18.08■□□□□ 0.48
NCKIPSD-204ENST00000416649 NCKAP5LQ9HCH0 1330 aa18.07■□□□□ 0.48
NCKIPSD-204ENST00000416649 KIAA2012Q0VF49 1180 aa18.07■□□□□ 0.48
NCKIPSD-204ENST00000416649 GPT2Q8TD30 523 aa18.07■□□□□ 0.48
NCKIPSD-204ENST00000416649 NUCB2P80303 420 aa18.06■□□□□ 0.48
NCKIPSD-204ENST00000416649 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.06■□□□□ 0.48
NCKIPSD-204ENST00000416649 ZNF830Q96NB3 372 aaPredicted RBP18.06■□□□□ 0.48
NCKIPSD-204ENST00000416649 SLC26A8Q96RN1 970 aa18.06■□□□□ 0.48
NCKIPSD-204ENST00000416649 C1orf115Q9H7X2 142 aa18.06■□□□□ 0.48
NCKIPSD-204ENST00000416649 NPC1L1Q9UHC9 1359 aa18.06■□□□□ 0.48
NCKIPSD-204ENST00000416649 SPDYE4A6NLX3 237 aa18.06■□□□□ 0.48
NCKIPSD-204ENST00000416649 BMP2KLQ5H9B9 411 aa18.06■□□□□ 0.48
NCKIPSD-204ENST00000416649 UTP14CQ5TAP6 766 aaKnown RBP18.06■□□□□ 0.48
NCKIPSD-204ENST00000416649 KIAA1210Q9ULL0 1709 aa18.06■□□□□ 0.48
NCKIPSD-204ENST00000416649 PDE4CQ08493 712 aa18.05■□□□□ 0.48
NCKIPSD-204ENST00000416649 TPRNQ4KMQ1 711 aa18.05■□□□□ 0.48
NCKIPSD-204ENST00000416649 PPP4R3BQ5MIZ7 849 aa18.05■□□□□ 0.48
NCKIPSD-204ENST00000416649 CDK19Q9BWU1 502 aa18.05■□□□□ 0.48
NCKIPSD-204ENST00000416649 MCM5P33992 734 aa18.05■□□□□ 0.48
NCKIPSD-204ENST00000416649 MTHFSP49914 203 aa18.05■□□□□ 0.48
NCKIPSD-204ENST00000416649 CABP1Q9NZU7 370 aa18.05■□□□□ 0.48
NCKIPSD-204ENST00000416649 TMEM63CQ9P1W3 806 aa18.05■□□□□ 0.48
NCKIPSD-204ENST00000416649 TMEM131LA2VDJ0 1609 aa18.05■□□□□ 0.48
NCKIPSD-204ENST00000416649 MYOM1P52179 1685 aa18.05■□□□□ 0.48
NCKIPSD-204ENST00000416649 RIMS2Q9UQ26 1411 aa18.05■□□□□ 0.48
NCKIPSD-204ENST00000416649 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.04■□□□□ 0.48
NCKIPSD-204ENST00000416649 QRICH2Q9H0J4 1663 aa18.04■□□□□ 0.48
NCKIPSD-204ENST00000416649 C17orf53Q8N3J3 647 aaPredicted RBP18.04■□□□□ 0.48
NCKIPSD-204ENST00000416649 NSFL1CQ9UNZ2 370 aaKnown RBP18.04■□□□□ 0.48
NCKIPSD-204ENST00000416649 POLR3AO14802 1390 aaPredicted RBP18.04■□□□□ 0.48
NCKIPSD-204ENST00000416649 ZGPATQ8N5A5 531 aaKnown RBP18.03■□□□□ 0.48
NCKIPSD-204ENST00000416649 ZBTB40Q9NUA8 1239 aa18.03■□□□□ 0.48
NCKIPSD-204ENST00000416649 NEURL4Q96JN8 1562 aa18.03■□□□□ 0.48
NCKIPSD-204ENST00000416649 YTHDC2Q9H6S0 1430 aaKnown RBP18.03■□□□□ 0.48
NCKIPSD-204ENST00000416649 ELL2O00472 640 aaPredicted RBP18.03■□□□□ 0.48
NCKIPSD-204ENST00000416649 LRSAM1Q6UWE0 723 aa18.03■□□□□ 0.48
NCKIPSD-204ENST00000416649 CLEC17AQ6ZS10 378 aa18.03■□□□□ 0.48
NCKIPSD-204ENST00000416649 MYRIPQ8NFW9 859 aa18.03■□□□□ 0.48
NCKIPSD-204ENST00000416649 SLC24A1O60721 1099 aa18.02■□□□□ 0.48
NCKIPSD-204ENST00000416649 ZC3H13Q5T200 1668 aaKnown RBP18.02■□□□□ 0.48
NCKIPSD-204ENST00000416649 FOXD4L6Q3SYB3 417 aaPredicted RBP18.02■□□□□ 0.48
NCKIPSD-204ENST00000416649 FOXD4L3Q6VB84 417 aaPredicted RBP18.02■□□□□ 0.48
NCKIPSD-204ENST00000416649 ATP2B3Q16720 1220 aa18.02■□□□□ 0.47
NCKIPSD-204ENST00000416649 ZNF710Q8N1W2 664 aa18.02■□□□□ 0.47
NCKIPSD-204ENST00000416649 A2ML1A8K2U0 1454 aa18.01■□□□□ 0.47
NCKIPSD-204ENST00000416649 CFAP53Q96M91 514 aa18.01■□□□□ 0.47
NCKIPSD-204ENST00000416649 PHF23Q9BUL5 403 aaPredicted RBP18■□□□□ 0.47
NCKIPSD-204ENST00000416649 METP08581 1390 aa18■□□□□ 0.47
NCKIPSD-204ENST00000416649 PPP6R1Q9UPN7 881 aa18■□□□□ 0.47
NCKIPSD-204ENST00000416649 ARHGEF40Q8TER5 1519 aa18■□□□□ 0.47
NCKIPSD-204ENST00000416649 LTKP29376 864 aa17.99■□□□□ 0.47
NCKIPSD-204ENST00000416649 SETBP1Q9Y6X0 1596 aa17.99■□□□□ 0.47
NCKIPSD-204ENST00000416649 TNRQ92752 1358 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms