RNA–Protein interactions for RNA: ENST00000416279.1

LINC01946-201, Transcript of long intergenic non-protein coding RNA 1946, humanhuman

TSL 5 BASIC

Gene LINC01946, Length 418 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01946-201ENST00000416279 USP54Q70EL1 1684 aa13.65□□□□□ -0.22
LINC01946-201ENST00000416279 TNS1Q9HBL0 1735 aaKnown RBP13.64□□□□□ -0.23
LINC01946-201ENST00000416279 USP31Q70CQ4 1352 aa13.64□□□□□ -0.23
LINC01946-201ENST00000416279 KTN1Q86UP2 1357 aaKnown RBP13.64□□□□□ -0.23
LINC01946-201ENST00000416279 TTC21AQ8NDW8 1320 aa13.64□□□□□ -0.23
LINC01946-201ENST00000416279 PUS7Q96PZ0 661 aaKnown RBP13.63□□□□□ -0.23
LINC01946-201ENST00000416279 USP35Q9P2H5 1018 aa13.63□□□□□ -0.23
LINC01946-201ENST00000416279 U3KPZ7 1027 aaPredicted RBP13.63□□□□□ -0.23
LINC01946-201ENST00000416279 EVA1CP58658 441 aa13.62□□□□□ -0.23
LINC01946-201ENST00000416279 AMER1Q5JTC6 1135 aaPredicted RBP13.62□□□□□ -0.23
LINC01946-201ENST00000416279 NME9Q86XW9 330 aa13.62□□□□□ -0.23
LINC01946-201ENST00000416279 PARP4Q9UKK3 1724 aaKnown RBP13.61□□□□□ -0.23
LINC01946-201ENST00000416279 A0A1W2PP64 1363 aa13.61□□□□□ -0.23
LINC01946-201ENST00000416279 A0A0G2JS52 829 aa13.61□□□□□ -0.23
LINC01946-201ENST00000416279 MYCNP04198 464 aaPredicted RBP13.61□□□□□ -0.23
LINC01946-201ENST00000416279 MYT1Q01538 1121 aa13.61□□□□□ -0.23
LINC01946-201ENST00000416279 TCP11L2Q8N4U5 519 aa13.61□□□□□ -0.23
LINC01946-201ENST00000416279 CRB1P82279 1406 aa13.61□□□□□ -0.23
LINC01946-201ENST00000416279 PEAK1Q9H792 1746 aa13.61□□□□□ -0.23
LINC01946-201ENST00000416279 RGPD1P0DJD0 1748 aa13.6□□□□□ -0.23
LINC01946-201ENST00000416279 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.6□□□□□ -0.23
LINC01946-201ENST00000416279 DISP2A7MBM2 1401 aa13.59□□□□□ -0.23
LINC01946-201ENST00000416279 ZBTB7CA1YPR0 619 aa13.59□□□□□ -0.23
LINC01946-201ENST00000416279 SOX12O15370 315 aa13.59□□□□□ -0.23
LINC01946-201ENST00000416279 THRAP3Q9Y2W1 955 aaKnown RBP13.59□□□□□ -0.23
LINC01946-201ENST00000416279 WNK3Q9BYP7 1800 aa13.59□□□□□ -0.23
LINC01946-201ENST00000416279 EDC4Q6P2E9 1401 aaKnown RBP13.58□□□□□ -0.24
LINC01946-201ENST00000416279 EN1Q05925 392 aaPredicted RBP13.58□□□□□ -0.24
LINC01946-201ENST00000416279 TMC1Q8TDI8 760 aa13.58□□□□□ -0.24
LINC01946-201ENST00000416279 CAMKK2Q96RR4 588 aa13.58□□□□□ -0.24
LINC01946-201ENST00000416279 WDR17Q8IZU2 1322 aa13.58□□□□□ -0.24
LINC01946-201ENST00000416279 USP47Q96K76 1375 aa13.58□□□□□ -0.24
LINC01946-201ENST00000416279 LRRC37A3O60309 1634 aa13.57□□□□□ -0.24
LINC01946-201ENST00000416279 OVOS2A0A0J9YW53 1432 aa13.57□□□□□ -0.24
LINC01946-201ENST00000416279 OVOS2Q6IE36 1432 aa13.57□□□□□ -0.24
LINC01946-201ENST00000416279 TRIM37O94972 964 aa13.57□□□□□ -0.24
LINC01946-201ENST00000416279 PTF1AQ7RTS3 328 aa13.57□□□□□ -0.24
LINC01946-201ENST00000416279 KCNH5Q8NCM2 988 aa13.57□□□□□ -0.24
LINC01946-201ENST00000416279 SBF2Q86WG5 1849 aa13.57□□□□□ -0.24
LINC01946-201ENST00000416279 FBLN1P23142 703 aa13.56□□□□□ -0.24
LINC01946-201ENST00000416279 LTN1O94822 1766 aa13.55□□□□□ -0.24
LINC01946-201ENST00000416279 EZH2Q15910 746 aaKnown RBP13.55□□□□□ -0.24
LINC01946-201ENST00000416279 FAM196AQ6ZSG2 479 aa13.55□□□□□ -0.24
LINC01946-201ENST00000416279 ABCC6O95255 1503 aa13.54□□□□□ -0.24
LINC01946-201ENST00000416279 MARCH10Q8NA82 808 aaPredicted RBP13.54□□□□□ -0.24
LINC01946-201ENST00000416279 CARD10Q9BWT7 1032 aa13.54□□□□□ -0.24
LINC01946-201ENST00000416279 BAG6P46379 1132 aa13.53□□□□□ -0.24
LINC01946-201ENST00000416279 C1QBPQ07021 282 aaKnown RBP13.53□□□□□ -0.24
LINC01946-201ENST00000416279 SF3B2Q13435 895 aaKnown RBP13.53□□□□□ -0.24
LINC01946-201ENST00000416279 TOM1L2Q6ZVM7 507 aa13.53□□□□□ -0.24
LINC01946-201ENST00000416279 HDGFL2Q7Z4V5 671 aaPredicted RBP13.53□□□□□ -0.24
LINC01946-201ENST00000416279 RREB1Q92766 1687 aa13.53□□□□□ -0.24
LINC01946-201ENST00000416279 ZEB1P37275 1124 aaPredicted RBP13.52□□□□□ -0.25
LINC01946-201ENST00000416279 PDE3BQ13370 1112 aa13.52□□□□□ -0.25
LINC01946-201ENST00000416279 CARD14Q9BXL6 1004 aa13.52□□□□□ -0.25
LINC01946-201ENST00000416279 TERF2IPQ9NYB0 399 aa13.52□□□□□ -0.25
LINC01946-201ENST00000416279 ERBB3P21860 1342 aa13.52□□□□□ -0.25
LINC01946-201ENST00000416279 MYOM1P52179 1685 aa13.52□□□□□ -0.25
LINC01946-201ENST00000416279 ANKRD36BQ8N2N9 1353 aa13.51□□□□□ -0.25
LINC01946-201ENST00000416279 NINLQ9Y2I6 1382 aa13.51□□□□□ -0.25
LINC01946-201ENST00000416279 PSDA5PKW4 1024 aaPredicted RBP13.51□□□□□ -0.25
LINC01946-201ENST00000416279 APBA3O96018 575 aa13.51□□□□□ -0.25
LINC01946-201ENST00000416279 NUP188Q5SRE5 1749 aa13.5□□□□□ -0.25
LINC01946-201ENST00000416279 FYB1O15117 783 aa13.5□□□□□ -0.25
LINC01946-201ENST00000416279 HSPA5P11021 654 aaKnown RBP13.5□□□□□ -0.25
LINC01946-201ENST00000416279 EIF4G2P78344 907 aaKnown RBP eCLIP13.5□□□□□ -0.25
LINC01946-201ENST00000416279 BCL9O00512 1426 aa13.49□□□□□ -0.25
LINC01946-201ENST00000416279 DDB1Q16531 1140 aa13.49□□□□□ -0.25
LINC01946-201ENST00000416279 OVOS2A0A0G2JMS6 1433 aa13.48□□□□□ -0.25
LINC01946-201ENST00000416279 RGPD2P0DJD1 1756 aa13.48□□□□□ -0.25
LINC01946-201ENST00000416279 MAP3K19Q56UN5 1328 aa13.48□□□□□ -0.25
LINC01946-201ENST00000416279 TMF1P82094 1093 aa13.48□□□□□ -0.25
LINC01946-201ENST00000416279 PROM2Q8N271 834 aa13.48□□□□□ -0.25
LINC01946-201ENST00000416279 ANKRD24Q8TF21 1146 aa13.48□□□□□ -0.25
LINC01946-201ENST00000416279 IP6K1Q92551 441 aa13.48□□□□□ -0.25
LINC01946-201ENST00000416279 R3HDM1Q15032 1099 aaKnown RBP13.47□□□□□ -0.25
LINC01946-201ENST00000416279 SAMD1Q6SPF0 538 aaPredicted RBP13.47□□□□□ -0.25
LINC01946-201ENST00000416279 FAM208AQ9UK61 1670 aaKnown RBP13.47□□□□□ -0.25
LINC01946-201ENST00000416279 CCDC7Q96M83 1385 aa13.46□□□□□ -0.25
LINC01946-201ENST00000416279 CSB-PGBD3P0DP91 1061 aa13.46□□□□□ -0.25
LINC01946-201ENST00000416279 LRP5O75197 1615 aa13.46□□□□□ -0.26
LINC01946-201ENST00000416279 KCNQ2O43526 872 aa13.45□□□□□ -0.26
LINC01946-201ENST00000416279 CDCA7Q9BWT1 371 aaPredicted RBP13.45□□□□□ -0.26
LINC01946-201ENST00000416279 GGNBP2Q9H3C7 697 aa13.45□□□□□ -0.26
LINC01946-201ENST00000416279 TNS2Q63HR2 1409 aa13.45□□□□□ -0.26
LINC01946-201ENST00000416279 PARD3Q8TEW0 1356 aa13.45□□□□□ -0.26
LINC01946-201ENST00000416279 HOXC9P31274 260 aa13.44□□□□□ -0.26
LINC01946-201ENST00000416279 BCL11BQ9C0K0 894 aaPredicted RBP13.44□□□□□ -0.26
LINC01946-201ENST00000416279 NLRP2Q9NX02 1062 aa13.44□□□□□ -0.26
LINC01946-201ENST00000416279 RGPD3A6NKT7 1758 aaPredicted RBP13.44□□□□□ -0.26
LINC01946-201ENST00000416279 RGPD4Q7Z3J3 1758 aa13.44□□□□□ -0.26
LINC01946-201ENST00000416279 C11orf95C9JLR9 678 aaPredicted RBP13.43□□□□□ -0.26
LINC01946-201ENST00000416279 EXOC5O00471 708 aa13.43□□□□□ -0.26
LINC01946-201ENST00000416279 PLSCR1O15162 318 aa13.43□□□□□ -0.26
LINC01946-201ENST00000416279 ATXN8OSP0DMR3 200 aa13.43□□□□□ -0.26
LINC01946-201ENST00000416279 RRS1Q15050 365 aaKnown RBP13.43□□□□□ -0.26
LINC01946-201ENST00000416279 COG3Q96JB2 828 aa13.43□□□□□ -0.26
LINC01946-201ENST00000416279 SHANK3Q9BYB0 1731 aa13.42□□□□□ -0.26
LINC01946-201ENST00000416279 KIF20BQ96Q89 1820 aa13.42□□□□□ -0.26
LINC01946-201ENST00000416279 ANO8Q9HCE9 1232 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms