RNA–Protein interactions for RNA: ENST00000415919.2

PRAMEF9-201, Transcript of PRAME family member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF9, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9-201ENST00000415919 SOS2Q07890 1332 aaPredicted RBP16.57■□□□□ 0.24
PRAMEF9-201ENST00000415919 SLIT3O75094 1523 aa16.56■□□□□ 0.24
PRAMEF9-201ENST00000415919 NFAT5O94916 1531 aa16.56■□□□□ 0.24
PRAMEF9-201ENST00000415919 PDE3BQ13370 1112 aa16.56■□□□□ 0.24
PRAMEF9-201ENST00000415919 NEUROD2Q15784 382 aa16.56■□□□□ 0.24
PRAMEF9-201ENST00000415919 NGEFQ8N5V2 710 aa16.56■□□□□ 0.24
PRAMEF9-201ENST00000415919 PLEKHF1Q96S99 279 aa16.55■□□□□ 0.24
PRAMEF9-201ENST00000415919 RTL1A6NKG5 1358 aa16.55■□□□□ 0.24
PRAMEF9-201ENST00000415919 PRKAR2BP31323 418 aa16.54■□□□□ 0.24
PRAMEF9-201ENST00000415919 IP6K1Q92551 441 aa16.54■□□□□ 0.24
PRAMEF9-201ENST00000415919 RSPH6AQ9H0K4 717 aa16.54■□□□□ 0.24
PRAMEF9-201ENST00000415919 RRP7AQ9Y3A4 280 aaKnown RBP16.54■□□□□ 0.24
PRAMEF9-201ENST00000415919 ARHGEF25Q86VW2 580 aa16.54■□□□□ 0.24
PRAMEF9-201ENST00000415919 LTV1Q96GA3 475 aaPredicted RBP16.54■□□□□ 0.24
PRAMEF9-201ENST00000415919 ZC3H6P61129 1189 aaKnown RBP16.53■□□□□ 0.24
PRAMEF9-201ENST00000415919 CABLES1Q8TDN4 633 aa16.53■□□□□ 0.24
PRAMEF9-201ENST00000415919 LTN1O94822 1766 aa16.52■□□□□ 0.24
PRAMEF9-201ENST00000415919 TOM1O60784 492 aa16.52■□□□□ 0.24
PRAMEF9-201ENST00000415919 SULT6B1Q6IMI4 303 aa16.52■□□□□ 0.24
PRAMEF9-201ENST00000415919 MED1Q15648 1581 aaPredicted RBP16.52■□□□□ 0.24
PRAMEF9-201ENST00000415919 NHSL1Q5SYE7 1610 aa16.51■□□□□ 0.23
PRAMEF9-201ENST00000415919 IQSEC2Q5JU85 1478 aa16.51■□□□□ 0.23
PRAMEF9-201ENST00000415919 CDCA7LQ96GN5 454 aa16.51■□□□□ 0.23
PRAMEF9-201ENST00000415919 HAP1P54257 671 aaPredicted RBP16.5■□□□□ 0.23
PRAMEF9-201ENST00000415919 GOLGA2Q08379 1002 aa16.5■□□□□ 0.23
PRAMEF9-201ENST00000415919 ROBO1Q9Y6N7 1651 aa16.5■□□□□ 0.23
PRAMEF9-201ENST00000415919 TMPOP42166 694 aaKnown RBP16.5■□□□□ 0.23
PRAMEF9-201ENST00000415919 AEBP1Q8IUX7 1158 aa16.5■□□□□ 0.23
PRAMEF9-201ENST00000415919 EYA1Q99502 592 aa16.5■□□□□ 0.23
PRAMEF9-201ENST00000415919 ZNF521Q96K83 1311 aa16.5■□□□□ 0.23
PRAMEF9-201ENST00000415919 PIP4K2BP78356 416 aa16.49■□□□□ 0.23
PRAMEF9-201ENST00000415919 WWC1Q8IX03 1113 aa16.49■□□□□ 0.23
PRAMEF9-201ENST00000415919 PHRF1Q9P1Y6 1649 aaKnown RBP16.48■□□□□ 0.23
PRAMEF9-201ENST00000415919 RIPK4P57078 832 aa16.48■□□□□ 0.23
PRAMEF9-201ENST00000415919 NCBP3Q53F19 620 aaKnown RBP16.48■□□□□ 0.23
PRAMEF9-201ENST00000415919 LRRC59Q96AG4 307 aaKnown RBP16.48■□□□□ 0.23
PRAMEF9-201ENST00000415919 PHACTR3Q96KR7 559 aa16.48■□□□□ 0.23
PRAMEF9-201ENST00000415919 IGSF1Q8N6C5 1336 aa16.47■□□□□ 0.23
PRAMEF9-201ENST00000415919 UBAP1LF5GYI3 381 aa16.47■□□□□ 0.23
PRAMEF9-201ENST00000415919 CCDC27Q2M243 656 aa16.47■□□□□ 0.23
PRAMEF9-201ENST00000415919 NFE2L2Q16236 605 aa16.46■□□□□ 0.22
PRAMEF9-201ENST00000415919 ANKRD24Q8TF21 1146 aa16.46■□□□□ 0.22
PRAMEF9-201ENST00000415919 RGPD1P0DJD0 1748 aa16.46■□□□□ 0.22
PRAMEF9-201ENST00000415919 AXIN2Q9Y2T1 843 aa16.45■□□□□ 0.22
PRAMEF9-201ENST00000415919 GTF3C3Q9Y5Q9 886 aa16.45■□□□□ 0.22
PRAMEF9-201ENST00000415919 AHDC1Q5TGY3 1603 aaPredicted RBP16.44■□□□□ 0.22
PRAMEF9-201ENST00000415919 CHRNA2Q15822 529 aa16.44■□□□□ 0.22
PRAMEF9-201ENST00000415919 WDR63Q8IWG1 891 aa16.44■□□□□ 0.22
PRAMEF9-201ENST00000415919 PHF23Q9BUL5 403 aaPredicted RBP16.44■□□□□ 0.22
PRAMEF9-201ENST00000415919 KIAA0232Q92628 1395 aa16.44■□□□□ 0.22
PRAMEF9-201ENST00000415919 E9PSI1 815 aa16.44■□□□□ 0.22
PRAMEF9-201ENST00000415919 SLFN5Q08AF3 891 aa16.44■□□□□ 0.22
PRAMEF9-201ENST00000415919 USHBP1Q8N6Y0 703 aa16.44■□□□□ 0.22
PRAMEF9-201ENST00000415919 SUPT16HQ9Y5B9 1047 aaKnown RBP16.44■□□□□ 0.22
PRAMEF9-201ENST00000415919 CRYBG1Q9Y4K1 1723 aa16.43■□□□□ 0.22
PRAMEF9-201ENST00000415919 NBPF6Q5VWK0 638 aa16.43■□□□□ 0.22
PRAMEF9-201ENST00000415919 NBPF4Q96M43 638 aa16.43■□□□□ 0.22
PRAMEF9-201ENST00000415919 TRIM35Q9UPQ4 493 aa16.43■□□□□ 0.22
PRAMEF9-201ENST00000415919 CPDO75976 1380 aa16.43■□□□□ 0.22
PRAMEF9-201ENST00000415919 KDRP35968 1356 aa16.43■□□□□ 0.22
PRAMEF9-201ENST00000415919 CERKQ8TCT0 537 aa16.42■□□□□ 0.22
PRAMEF9-201ENST00000415919 PRDM11Q9NQV5 511 aa16.42■□□□□ 0.22
PRAMEF9-201ENST00000415919 SPINK5Q9NQ38 1064 aaPredicted RBP16.42■□□□□ 0.22
PRAMEF9-201ENST00000415919 LMOD3Q0VAK6 560 aa16.41■□□□□ 0.22
PRAMEF9-201ENST00000415919 DUSP27Q5VZP5 1158 aa16.41■□□□□ 0.22
PRAMEF9-201ENST00000415919 CSB-PGBD3P0DP91 1061 aa16.4■□□□□ 0.22
PRAMEF9-201ENST00000415919 NEFLP07196 543 aa16.39■□□□□ 0.22
PRAMEF9-201ENST00000415919 ERBB3P21860 1342 aa16.39■□□□□ 0.21
PRAMEF9-201ENST00000415919 PHLPP1O60346 1717 aa16.39■□□□□ 0.21
PRAMEF9-201ENST00000415919 TRMT2AQ8IZ69 625 aaKnown RBP16.39■□□□□ 0.21
PRAMEF9-201ENST00000415919 NLRP2Q9NX02 1062 aa16.38■□□□□ 0.21
PRAMEF9-201ENST00000415919 MTHFSDQ2M296 383 aaKnown RBP16.37■□□□□ 0.21
PRAMEF9-201ENST00000415919 GAS2L2Q8NHY3 880 aa16.37■□□□□ 0.21
PRAMEF9-201ENST00000415919 MYH16Q9H6N6 1097 aa16.37■□□□□ 0.21
PRAMEF9-201ENST00000415919 RCAN3Q9UKA8 241 aa16.37■□□□□ 0.21
PRAMEF9-201ENST00000415919 ABCC6O95255 1503 aa16.37■□□□□ 0.21
PRAMEF9-201ENST00000415919 RGPD5Q99666 1765 aa16.37■□□□□ 0.21
PRAMEF9-201ENST00000415919 COL18A1P39060 1754 aa16.37■□□□□ 0.21
PRAMEF9-201ENST00000415919 CALD1Q05682 793 aaKnown RBP16.37■□□□□ 0.21
PRAMEF9-201ENST00000415919 ABCA3Q99758 1704 aa16.36■□□□□ 0.21
PRAMEF9-201ENST00000415919 IL16Q14005 1332 aa16.36■□□□□ 0.21
PRAMEF9-201ENST00000415919 RGPD2P0DJD1 1756 aa16.35■□□□□ 0.21
PRAMEF9-201ENST00000415919 COL16A1Q07092 1604 aaPredicted RBP16.35■□□□□ 0.21
PRAMEF9-201ENST00000415919 FAM83GA6ND36 823 aa16.35■□□□□ 0.21
PRAMEF9-201ENST00000415919 RTF1Q92541 710 aaKnown RBP16.35■□□□□ 0.21
PRAMEF9-201ENST00000415919 THUMPD2Q9BTF0 503 aaKnown RBP16.35■□□□□ 0.21
PRAMEF9-201ENST00000415919 LAS1LQ9Y4W2 734 aaKnown RBP16.35■□□□□ 0.21
PRAMEF9-201ENST00000415919 EVA1CP58658 441 aa16.33■□□□□ 0.21
PRAMEF9-201ENST00000415919 DCTN1Q14203 1278 aa16.33■□□□□ 0.21
PRAMEF9-201ENST00000415919 PLEKHO1Q53GL0 409 aaPredicted RBP16.33■□□□□ 0.2
PRAMEF9-201ENST00000415919 COL22A1Q8NFW1 1626 aaPredicted RBP16.33■□□□□ 0.2
PRAMEF9-201ENST00000415919 FKBP8Q14318 412 aa16.32■□□□□ 0.2
PRAMEF9-201ENST00000415919 RAPGEF4Q8WZA2 1011 aa16.32■□□□□ 0.2
PRAMEF9-201ENST00000415919 TSR2Q969E8 191 aaKnown RBP16.32■□□□□ 0.2
PRAMEF9-201ENST00000415919 STRN4Q9NRL3 753 aa16.32■□□□□ 0.2
PRAMEF9-201ENST00000415919 NCAPD2Q15021 1401 aa16.32■□□□□ 0.2
PRAMEF9-201ENST00000415919 DLG5Q8TDM6 1919 aa16.32■□□□□ 0.2
PRAMEF9-201ENST00000415919 CAMTA1Q9Y6Y1 1673 aa16.32■□□□□ 0.2
PRAMEF9-201ENST00000415919 TOM1L2Q6ZVM7 507 aa16.31■□□□□ 0.2
PRAMEF9-201ENST00000415919 MCM10Q7L590 875 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms