RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 TOM1L2Q6ZVM7 507 aa19.1■□□□□ 0.65
CTHRC1-202ENST00000415886 CASZ1Q86V15 1759 aa19.1■□□□□ 0.65
CTHRC1-202ENST00000415886 PLSCR1O15162 318 aa19.09■□□□□ 0.65
CTHRC1-202ENST00000415886 BCL11BQ9C0K0 894 aaPredicted RBP19.07■□□□□ 0.64
CTHRC1-202ENST00000415886 PDGFDQ9GZP0 370 aaPredicted RBP19.07■□□□□ 0.64
CTHRC1-202ENST00000415886 AXIN2Q9Y2T1 843 aa19.07■□□□□ 0.64
CTHRC1-202ENST00000415886 CPSF1Q10570 1443 aaKnown RBP19.07■□□□□ 0.64
CTHRC1-202ENST00000415886 WDR17Q8IZU2 1322 aa19.06■□□□□ 0.64
CTHRC1-202ENST00000415886 MARCH10Q8NA82 808 aaPredicted RBP19.06■□□□□ 0.64
CTHRC1-202ENST00000415886 AKAP12Q02952 1782 aa19.06■□□□□ 0.64
CTHRC1-202ENST00000415886 DCAF8L1A6NGE4 600 aa19.05■□□□□ 0.64
CTHRC1-202ENST00000415886 PROM2Q8N271 834 aa19.04■□□□□ 0.64
CTHRC1-202ENST00000415886 MYOM1P52179 1685 aa19.04■□□□□ 0.64
CTHRC1-202ENST00000415886 RGPD5Q99666 1765 aa19.04■□□□□ 0.64
CTHRC1-202ENST00000415886 BCL9O00512 1426 aa19.03■□□□□ 0.64
CTHRC1-202ENST00000415886 SOX12O15370 315 aa19.03■□□□□ 0.64
CTHRC1-202ENST00000415886 ZBTB7AO95365 584 aa19.03■□□□□ 0.64
CTHRC1-202ENST00000415886 ARHGEF25Q86VW2 580 aa19.02■□□□□ 0.64
CTHRC1-202ENST00000415886 TRPM1Q7Z4N2 1603 aa19.01■□□□□ 0.63
CTHRC1-202ENST00000415886 CDCA7Q9BWT1 371 aaPredicted RBP19.01■□□□□ 0.63
CTHRC1-202ENST00000415886 TTC21BQ7Z4L5 1316 aa19■□□□□ 0.63
CTHRC1-202ENST00000415886 EVC2Q86UK5 1308 aa19■□□□□ 0.63
CTHRC1-202ENST00000415886 CSB-PGBD3P0DP91 1061 aa19■□□□□ 0.63
CTHRC1-202ENST00000415886 PTGER2P43116 358 aa18.99■□□□□ 0.63
CTHRC1-202ENST00000415886 CARD10Q9BWT7 1032 aa18.99■□□□□ 0.63
CTHRC1-202ENST00000415886 NFAT5O94916 1531 aa18.99■□□□□ 0.63
CTHRC1-202ENST00000415886 TXNRD1Q16881 649 aa18.98■□□□□ 0.63
CTHRC1-202ENST00000415886 KCNH5Q8NCM2 988 aa18.98■□□□□ 0.63
CTHRC1-202ENST00000415886 ATF5Q9Y2D1 282 aaPredicted RBP18.98■□□□□ 0.63
CTHRC1-202ENST00000415886 STK32BQ9NY57 414 aa18.97■□□□□ 0.63
CTHRC1-202ENST00000415886 EXOC5O00471 708 aa18.96■□□□□ 0.63
CTHRC1-202ENST00000415886 SLC15A2Q16348 729 aa18.96■□□□□ 0.63
CTHRC1-202ENST00000415886 L3MBTL2Q969R5 705 aa18.96■□□□□ 0.63
CTHRC1-202ENST00000415886 ZNF692Q9BU19 519 aaPredicted RBP18.96■□□□□ 0.63
CTHRC1-202ENST00000415886 TNS2Q63HR2 1409 aa18.96■□□□□ 0.63
CTHRC1-202ENST00000415886 TTC21AQ8NDW8 1320 aa18.96■□□□□ 0.63
CTHRC1-202ENST00000415886 CCDC7Q96M83 1385 aa18.95■□□□□ 0.62
CTHRC1-202ENST00000415886 NHSQ6T4R5 1651 aa18.95■□□□□ 0.62
CTHRC1-202ENST00000415886 ABCC6O95255 1503 aa18.94■□□□□ 0.62
CTHRC1-202ENST00000415886 TRIM26Q12899 539 aaPredicted RBP18.93■□□□□ 0.62
CTHRC1-202ENST00000415886 FHDC1Q9C0D6 1143 aaPredicted RBP18.93■□□□□ 0.62
CTHRC1-202ENST00000415886 KTN1Q86UP2 1357 aaKnown RBP18.93■□□□□ 0.62
CTHRC1-202ENST00000415886 ACSBG1Q96GR2 724 aa18.92■□□□□ 0.62
CTHRC1-202ENST00000415886 ROCK2O75116 1388 aaKnown RBP18.92■□□□□ 0.62
CTHRC1-202ENST00000415886 MON2Q7Z3U7 1717 aa18.91■□□□□ 0.62
CTHRC1-202ENST00000415886 SYT17Q9BSW7 474 aa18.91■□□□□ 0.62
CTHRC1-202ENST00000415886 MTFR1LQ9H019 292 aa18.91■□□□□ 0.62
CTHRC1-202ENST00000415886 PAPPAQ13219 1627 aa18.9■□□□□ 0.62
CTHRC1-202ENST00000415886 ZNF784Q8NCA9 323 aaPredicted RBP18.9■□□□□ 0.62
CTHRC1-202ENST00000415886 SGIP1Q9BQI5 828 aa18.9■□□□□ 0.62
CTHRC1-202ENST00000415886 NEUROD1Q13562 356 aa18.89■□□□□ 0.61
CTHRC1-202ENST00000415886 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.89■□□□□ 0.61
CTHRC1-202ENST00000415886 ERBB3P21860 1342 aa18.88■□□□□ 0.61
CTHRC1-202ENST00000415886 USP54Q70EL1 1684 aa18.88■□□□□ 0.61
CTHRC1-202ENST00000415886 BTAF1O14981 1849 aa18.87■□□□□ 0.61
CTHRC1-202ENST00000415886 LTN1O94822 1766 aa18.87■□□□□ 0.61
CTHRC1-202ENST00000415886 SIN3AQ96ST3 1273 aa18.87■□□□□ 0.61
CTHRC1-202ENST00000415886 NLRP2Q9NX02 1062 aa18.87■□□□□ 0.61
CTHRC1-202ENST00000415886 USP31Q70CQ4 1352 aa18.86■□□□□ 0.61
CTHRC1-202ENST00000415886 CD163L1Q9NR16 1453 aa18.85■□□□□ 0.61
CTHRC1-202ENST00000415886 IL2RBP14784 551 aa18.85■□□□□ 0.61
CTHRC1-202ENST00000415886 NME9Q86XW9 330 aa18.85■□□□□ 0.61
CTHRC1-202ENST00000415886 ZNF827Q17R98 1081 aa18.84■□□□□ 0.61
CTHRC1-202ENST00000415886 ARXQ96QS3 562 aa18.84■□□□□ 0.61
CTHRC1-202ENST00000415886 SBNO2Q9Y2G9 1366 aa18.83■□□□□ 0.61
CTHRC1-202ENST00000415886 ANKRD24Q8TF21 1146 aa18.83■□□□□ 0.6
CTHRC1-202ENST00000415886 LRRC4BQ9NT99 713 aa18.82■□□□□ 0.6
CTHRC1-202ENST00000415886 MAP3K5Q99683 1374 aa18.81■□□□□ 0.6
CTHRC1-202ENST00000415886 CHD4Q14839 1912 aa18.8■□□□□ 0.6
CTHRC1-202ENST00000415886 TMC1Q8TDI8 760 aa18.79■□□□□ 0.6
CTHRC1-202ENST00000415886 EDC4Q6P2E9 1401 aaKnown RBP18.77■□□□□ 0.6
CTHRC1-202ENST00000415886 HDGFL2Q7Z4V5 671 aaPredicted RBP18.77■□□□□ 0.6
CTHRC1-202ENST00000415886 AKT1S1Q96B36 256 aa18.77■□□□□ 0.6
CTHRC1-202ENST00000415886 SLC12A5Q9H2X9 1139 aa18.77■□□□□ 0.6
CTHRC1-202ENST00000415886 KLHL34Q8N239 644 aa18.76■□□□□ 0.59
CTHRC1-202ENST00000415886 QSER1Q2KHR3 1735 aa18.76■□□□□ 0.59
CTHRC1-202ENST00000415886 UTRNP46939 3433 aa18.76■□□□□ 0.59
CTHRC1-202ENST00000415886 SENP3-EIF4A1A0A087X0R7 540 aa18.75■□□□□ 0.59
CTHRC1-202ENST00000415886 GPR162Q16538 588 aa18.75■□□□□ 0.59
CTHRC1-202ENST00000415886 DDX54Q8TDD1 881 aaKnown RBP18.75■□□□□ 0.59
CTHRC1-202ENST00000415886 A0A1W2PP64 1363 aa18.75■□□□□ 0.59
CTHRC1-202ENST00000415886 PNPLA7Q6ZV29 1317 aa18.74■□□□□ 0.59
CTHRC1-202ENST00000415886 TUBGCP6Q96RT7 1819 aa18.74■□□□□ 0.59
CTHRC1-202ENST00000415886 KCNQ4P56696 695 aa18.74■□□□□ 0.59
CTHRC1-202ENST00000415886 C1QTNF8P60827 252 aa18.74■□□□□ 0.59
CTHRC1-202ENST00000415886 LTV1Q96GA3 475 aaPredicted RBP18.74■□□□□ 0.59
CTHRC1-202ENST00000415886 CARD11Q9BXL7 1154 aa18.74■□□□□ 0.59
CTHRC1-202ENST00000415886 FAM208AQ9UK61 1670 aaKnown RBP18.73■□□□□ 0.59
CTHRC1-202ENST00000415886 SLC27A3Q5K4L6 730 aa18.73■□□□□ 0.59
CTHRC1-202ENST00000415886 COL24A1Q17RW2 1714 aa18.73■□□□□ 0.59
CTHRC1-202ENST00000415886 DOT1LQ8TEK3 1739 aa18.73■□□□□ 0.59
CTHRC1-202ENST00000415886 KAT6BQ8WYB5 2073 aa18.73■□□□□ 0.59
CTHRC1-202ENST00000415886 SLC16A10Q8TF71 515 aa18.72■□□□□ 0.59
CTHRC1-202ENST00000415886 IP6K1Q92551 441 aa18.72■□□□□ 0.59
CTHRC1-202ENST00000415886 POLD1P28340 1107 aa18.71■□□□□ 0.59
CTHRC1-202ENST00000415886 PELP1Q8IZL8 1130 aaKnown RBP18.71■□□□□ 0.59
CTHRC1-202ENST00000415886 SYTL4Q96C24 671 aaPredicted RBP18.71■□□□□ 0.59
CTHRC1-202ENST00000415886 TERF2IPQ9NYB0 399 aa18.71■□□□□ 0.59
CTHRC1-202ENST00000415886 TFCP2L1Q9NZI6 479 aa18.7■□□□□ 0.58
CTHRC1-202ENST00000415886 NSD2O96028 1365 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms