RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 NANOS1Q8WY41 292 aaKnown RBP8.36□□□□□ -1.07
TRAPPC13-203ENST00000415825 GPKOWQ92917 476 aaPredicted RBP eCLIP8.36□□□□□ -1.07
TRAPPC13-203ENST00000415825 CDV3Q9UKY7 258 aaKnown RBP8.36□□□□□ -1.07
TRAPPC13-203ENST00000415825 C4orf48Q5BLP8 95 aa8.35□□□□□ -1.07
TRAPPC13-203ENST00000415825 BARGINQ6ZT62 677 aa8.35□□□□□ -1.07
TRAPPC13-203ENST00000415825 TRMT44Q8IYL2 757 aaKnown RBP8.35□□□□□ -1.07
TRAPPC13-203ENST00000415825 CCDC155Q8N6L0 562 aa8.35□□□□□ -1.07
TRAPPC13-203ENST00000415825 CABLES1Q8TDN4 633 aa8.34□□□□□ -1.07
TRAPPC13-203ENST00000415825 SLC10A4Q96EP9 437 aa8.34□□□□□ -1.07
TRAPPC13-203ENST00000415825 C1QTNF2Q9BXJ5 285 aa8.34□□□□□ -1.07
TRAPPC13-203ENST00000415825 ENAMQ9NRM1 1142 aa8.34□□□□□ -1.07
TRAPPC13-203ENST00000415825 GPR161Q8N6U8 529 aaKnown RBP8.33□□□□□ -1.08
TRAPPC13-203ENST00000415825 TRIM52Q96A61 297 aa8.33□□□□□ -1.08
TRAPPC13-203ENST00000415825 GSK3AP49840 483 aa8.32□□□□□ -1.08
TRAPPC13-203ENST00000415825 PPP1R26Q5T8A7 1209 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC13-203ENST00000415825 ZNF385CQ66K41 422 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC13-203ENST00000415825 VWA5B2Q8N398 1253 aa8.32□□□□□ -1.08
TRAPPC13-203ENST00000415825 POLMQ9NP87 494 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC13-203ENST00000415825 PER1O15534 1290 aaPredicted RBP8.31□□□□□ -1.08
TRAPPC13-203ENST00000415825 SPINT1O43278 529 aa8.31□□□□□ -1.08
TRAPPC13-203ENST00000415825 ITGA6P23229 1130 aa8.31□□□□□ -1.08
TRAPPC13-203ENST00000415825 KRT76Q01546 638 aa8.31□□□□□ -1.08
TRAPPC13-203ENST00000415825 SH3RF1Q7Z6J0 888 aa8.31□□□□□ -1.08
TRAPPC13-203ENST00000415825 SH3BP5LQ7L8J4 393 aa8.3□□□□□ -1.08
TRAPPC13-203ENST00000415825 ZBTB33Q86T24 672 aa8.3□□□□□ -1.08
TRAPPC13-203ENST00000415825 ARHGAP9Q9BRR9 750 aa8.3□□□□□ -1.08
TRAPPC13-203ENST00000415825 ZMYND10O75800 440 aa8.29□□□□□ -1.08
TRAPPC13-203ENST00000415825 PODNQ7Z5L7 613 aa8.29□□□□□ -1.08
TRAPPC13-203ENST00000415825 PARP9Q8IXQ6 854 aa8.29□□□□□ -1.08
TRAPPC13-203ENST00000415825 PHF20L1A8MW92 1017 aa8.28□□□□□ -1.08
TRAPPC13-203ENST00000415825 SLURP2P0DP57 97 aa8.28□□□□□ -1.08
TRAPPC13-203ENST00000415825 CBLBQ13191 982 aa8.28□□□□□ -1.08
TRAPPC13-203ENST00000415825 FOXR1Q6PIV2 292 aa8.28□□□□□ -1.08
TRAPPC13-203ENST00000415825 Q6ZVU0 165 aa8.28□□□□□ -1.08
TRAPPC13-203ENST00000415825 KCTD15Q96SI1 283 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC13-203ENST00000415825 SLC35F4A4IF30 521 aa8.27□□□□□ -1.09
TRAPPC13-203ENST00000415825 RELBQ01201 579 aa8.27□□□□□ -1.09
TRAPPC13-203ENST00000415825 ERFEQ4G0M1 354 aa8.27□□□□□ -1.09
TRAPPC13-203ENST00000415825 PNMA1Q8ND90 353 aa8.27□□□□□ -1.09
TRAPPC13-203ENST00000415825 TUSC1Q2TAM9 212 aa8.26□□□□□ -1.09
TRAPPC13-203ENST00000415825 RNFT1Q5M7Z0 435 aa8.26□□□□□ -1.09
TRAPPC13-203ENST00000415825 ADAMTS2O95450 1211 aa8.25□□□□□ -1.09
TRAPPC13-203ENST00000415825 QPCTQ16769 361 aa8.25□□□□□ -1.09
TRAPPC13-203ENST00000415825 PDXDC2PQ6P474 469 aa8.25□□□□□ -1.09
TRAPPC13-203ENST00000415825 AK7Q96M32 723 aa8.25□□□□□ -1.09
TRAPPC13-203ENST00000415825 INSM2Q96T92 566 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC13-203ENST00000415825 RSPH6AQ9H0K4 717 aa8.25□□□□□ -1.09
TRAPPC13-203ENST00000415825 ATP1B4Q9UN42 357 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC13-203ENST00000415825 LILRB3O75022 631 aa8.24□□□□□ -1.09
TRAPPC13-203ENST00000415825 SRSF11Q05519 484 aaKnown RBP8.24□□□□□ -1.09
TRAPPC13-203ENST00000415825 NBPF20Q3BBV1 942 aa8.24□□□□□ -1.09
TRAPPC13-203ENST00000415825 ZC3H15Q8WU90 426 aaKnown RBP8.24□□□□□ -1.09
TRAPPC13-203ENST00000415825 MSTNO14793 375 aa8.23□□□□□ -1.09
TRAPPC13-203ENST00000415825 ARHGEF15O94989 841 aa8.23□□□□□ -1.09
TRAPPC13-203ENST00000415825 PTK2Q05397 1052 aa8.23□□□□□ -1.09
TRAPPC13-203ENST00000415825 MYSM1Q5VVJ2 828 aa8.23□□□□□ -1.09
TRAPPC13-203ENST00000415825 GALNT6Q8NCL4 622 aa8.23□□□□□ -1.09
TRAPPC13-203ENST00000415825 WHAMMQ8TF30 809 aa8.23□□□□□ -1.09
TRAPPC13-203ENST00000415825 AGBL1Q96MI9 1066 aa8.23□□□□□ -1.09
TRAPPC13-203ENST00000415825 TRIM66O15016 1216 aa8.22□□□□□ -1.09
TRAPPC13-203ENST00000415825 CTSOP43234 321 aaPredicted RBP8.22□□□□□ -1.09
TRAPPC13-203ENST00000415825 CLK2P49760 499 aaKnown RBP8.22□□□□□ -1.09
TRAPPC13-203ENST00000415825 BEND7Q8N7W2 519 aaPredicted RBP8.22□□□□□ -1.09
TRAPPC13-203ENST00000415825 LIMD1Q9UGP4 676 aa8.22□□□□□ -1.09
TRAPPC13-203ENST00000415825 FKBPLQ9UIM3 349 aa8.22□□□□□ -1.09
TRAPPC13-203ENST00000415825 ZC3H4Q9UPT8 1303 aaKnown RBP8.22□□□□□ -1.09
TRAPPC13-203ENST00000415825 NEDD1Q8NHV4 660 aa8.21□□□□□ -1.1
TRAPPC13-203ENST00000415825 ZNF395Q9H8N7 513 aaPredicted RBP8.21□□□□□ -1.1
TRAPPC13-203ENST00000415825 LYSMD3Q7Z3D4 306 aa8.2□□□□□ -1.1
TRAPPC13-203ENST00000415825 RAB15P59190 212 aa8.19□□□□□ -1.1
TRAPPC13-203ENST00000415825 INTS6LQ5JSJ4 861 aaKnown RBP8.19□□□□□ -1.1
TRAPPC13-203ENST00000415825 RNF217Q8TC41 542 aa8.19□□□□□ -1.1
TRAPPC13-203ENST00000415825 GMCL1Q96IK5 515 aa8.19□□□□□ -1.1
TRAPPC13-203ENST00000415825 NSFL1CQ9UNZ2 370 aaKnown RBP8.19□□□□□ -1.1
TRAPPC13-203ENST00000415825 RTL5Q5HYW3 569 aaPredicted RBP8.18□□□□□ -1.1
TRAPPC13-203ENST00000415825 LYPD4Q6UWN0 246 aa8.18□□□□□ -1.1
TRAPPC13-203ENST00000415825 TRERF1Q96PN7 1200 aa8.18□□□□□ -1.1
TRAPPC13-203ENST00000415825 ADH1AP07327 375 aa8.17□□□□□ -1.1
TRAPPC13-203ENST00000415825 CELA2BP08218 269 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC13-203ENST00000415825 GPSM3Q9Y4H4 160 aa8.17□□□□□ -1.1
TRAPPC13-203ENST00000415825 H7C1W4 665 aa8.16□□□□□ -1.1
TRAPPC13-203ENST00000415825 RIPOR1Q6ZS17 1223 aa8.16□□□□□ -1.1
TRAPPC13-203ENST00000415825 DZIP3Q86Y13 1208 aaKnown RBP8.16□□□□□ -1.1
TRAPPC13-203ENST00000415825 MBIPQ9NS73 344 aa8.16□□□□□ -1.1
TRAPPC13-203ENST00000415825 POLR3EQ9NVU0 708 aa8.15□□□□□ -1.1
TRAPPC13-203ENST00000415825 PTGIRP43119 386 aa8.14□□□□□ -1.11
TRAPPC13-203ENST00000415825 CTDSPL2Q05D32 466 aa8.14□□□□□ -1.11
TRAPPC13-203ENST00000415825 PDE4DQ08499 809 aa8.14□□□□□ -1.11
TRAPPC13-203ENST00000415825 PLA2G4EQ3MJ16 856 aa8.13□□□□□ -1.11
TRAPPC13-203ENST00000415825 PRICKLE2Q7Z3G6 844 aa8.13□□□□□ -1.11
TRAPPC13-203ENST00000415825 ZNF784Q8NCA9 323 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC13-203ENST00000415825 ADAM32Q8TC27 787 aa8.13□□□□□ -1.11
TRAPPC13-203ENST00000415825 SENP3-EIF4A1A0A087X0R7 540 aa8.12□□□□□ -1.11
TRAPPC13-203ENST00000415825 BCRP11274 1271 aa8.12□□□□□ -1.11
TRAPPC13-203ENST00000415825 TRIM22Q8IYM9 498 aa8.12□□□□□ -1.11
TRAPPC13-203ENST00000415825 DCAF5Q96JK2 942 aa8.12□□□□□ -1.11
TRAPPC13-203ENST00000415825 SPOCK3Q9BQ16 436 aa8.12□□□□□ -1.11
TRAPPC13-203ENST00000415825 IGF1RP08069 1367 aa8.11□□□□□ -1.11
TRAPPC13-203ENST00000415825 ADAM23O75077 832 aa8.11□□□□□ -1.11
TRAPPC13-203ENST00000415825 NR6A1Q15406 480 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms