RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 TIGD1Q96MW7 591 aa9.57□□□□□ -0.88
SIK3-203ENST00000415541 FEZ1Q99689 392 aa9.57□□□□□ -0.88
SIK3-203ENST00000415541 VIRMAQ69YN4 1812 aaKnown RBP9.57□□□□□ -0.88
SIK3-203ENST00000415541 NINLQ9Y2I6 1382 aa9.56□□□□□ -0.88
SIK3-203ENST00000415541 GABPB1Q06547 395 aaPredicted RBP9.56□□□□□ -0.88
SIK3-203ENST00000415541 COG6Q9Y2V7 657 aa9.56□□□□□ -0.88
SIK3-203ENST00000415541 ABCA9Q8IUA7 1624 aa9.56□□□□□ -0.88
SIK3-203ENST00000415541 ZRANB1Q9UGI0 708 aa9.56□□□□□ -0.88
SIK3-203ENST00000415541 EMILIN1Q9Y6C2 1016 aa9.56□□□□□ -0.88
SIK3-203ENST00000415541 ZMYM4Q5VZL5 1548 aa9.55□□□□□ -0.88
SIK3-203ENST00000415541 ARAP3Q8WWN8 1544 aa9.55□□□□□ -0.88
SIK3-203ENST00000415541 MFAP1P55081 439 aaKnown RBP9.55□□□□□ -0.88
SIK3-203ENST00000415541 ITPRIPQ8IWB1 547 aa9.55□□□□□ -0.88
SIK3-203ENST00000415541 EIF2AK4Q9P2K8 1649 aaKnown RBP9.55□□□□□ -0.88
SIK3-203ENST00000415541 ATF3P18847 181 aa9.55□□□□□ -0.88
SIK3-203ENST00000415541 ZNF445P59923 1031 aa9.55□□□□□ -0.88
SIK3-203ENST00000415541 TSR2Q969E8 191 aaKnown RBP9.55□□□□□ -0.88
SIK3-203ENST00000415541 ZNF692Q9BU19 519 aaPredicted RBP9.55□□□□□ -0.88
SIK3-203ENST00000415541 DIAPH3Q9NSV4 1193 aa9.55□□□□□ -0.88
SIK3-203ENST00000415541 CALCOCO1Q9P1Z2 691 aa9.55□□□□□ -0.88
SIK3-203ENST00000415541 PTPRTO14522 1441 aa9.55□□□□□ -0.88
SIK3-203ENST00000415541 FYB1O15117 783 aa9.55□□□□□ -0.88
SIK3-203ENST00000415541 LTKP29376 864 aa9.55□□□□□ -0.88
SIK3-203ENST00000415541 RAB3GAP1Q15042 981 aa9.55□□□□□ -0.88
SIK3-203ENST00000415541 PDE3AQ14432 1141 aa9.54□□□□□ -0.88
SIK3-203ENST00000415541 SULT6B1Q6IMI4 303 aa9.54□□□□□ -0.88
SIK3-203ENST00000415541 RWDD1Q9H446 243 aaPredicted RBP9.54□□□□□ -0.88
SIK3-203ENST00000415541 HECW2Q9P2P5 1572 aa9.54□□□□□ -0.88
SIK3-203ENST00000415541 BCAR3O75815 825 aa9.54□□□□□ -0.88
SIK3-203ENST00000415541 IGHDP01880 384 aa9.54□□□□□ -0.88
SIK3-203ENST00000415541 TNNT3P45378 269 aaPredicted RBP9.54□□□□□ -0.88
SIK3-203ENST00000415541 SMC5Q8IY18 1101 aa9.54□□□□□ -0.88
SIK3-203ENST00000415541 PDLIM2Q96JY6 352 aa9.54□□□□□ -0.88
SIK3-203ENST00000415541 OGFRQ9NZT2 677 aa9.53□□□□□ -0.88
SIK3-203ENST00000415541 MADDQ8WXG6 1647 aa9.53□□□□□ -0.88
SIK3-203ENST00000415541 IQGAP1P46940 1657 aa9.53□□□□□ -0.88
SIK3-203ENST00000415541 FOXO3O43524 673 aa9.53□□□□□ -0.88
SIK3-203ENST00000415541 IRX5P78411 483 aaPredicted RBP9.53□□□□□ -0.88
SIK3-203ENST00000415541 SECISBP2LQ93073 1101 aaKnown RBP9.53□□□□□ -0.88
SIK3-203ENST00000415541 SNX21Q969T3 373 aa9.53□□□□□ -0.88
SIK3-203ENST00000415541 RIMBP3CA6NJZ7 1639 aa9.53□□□□□ -0.88
SIK3-203ENST00000415541 RIMBP3BA6NNM3 1639 aa9.53□□□□□ -0.88
SIK3-203ENST00000415541 RIMBP3Q9UFD9 1639 aa9.53□□□□□ -0.88
SIK3-203ENST00000415541 SPDYE4A6NLX3 237 aa9.53□□□□□ -0.88
SIK3-203ENST00000415541 THUMPD2Q9BTF0 503 aaKnown RBP9.53□□□□□ -0.88
SIK3-203ENST00000415541 CHMP4AQ9BY43 222 aa9.53□□□□□ -0.88
SIK3-203ENST00000415541 APPP05067 770 aa9.52□□□□□ -0.88
SIK3-203ENST00000415541 GTF2F1P35269 517 aaKnown RBP eCLIP9.52□□□□□ -0.886e-7■■■■■ 39.1
SIK3-203ENST00000415541 ATP2B3Q16720 1220 aa9.52□□□□□ -0.88
SIK3-203ENST00000415541 DUSP27Q5VZP5 1158 aa9.52□□□□□ -0.88
SIK3-203ENST00000415541 PANK1Q8TE04 598 aa9.52□□□□□ -0.88
SIK3-203ENST00000415541 YTHDC2Q9H6S0 1430 aaKnown RBP9.52□□□□□ -0.88
SIK3-203ENST00000415541 NLRP1Q9C000 1473 aa9.52□□□□□ -0.88
SIK3-203ENST00000415541 APBB1O00213 710 aa9.52□□□□□ -0.89
SIK3-203ENST00000415541 IPO8O15397 1037 aaKnown RBP9.52□□□□□ -0.89
SIK3-203ENST00000415541 CHRM1P11229 460 aaPredicted RBP9.52□□□□□ -0.89
SIK3-203ENST00000415541 NECTIN2Q92692 538 aa9.52□□□□□ -0.89
SIK3-203ENST00000415541 CFAP74Q9C0B2 1584 aa9.52□□□□□ -0.89
SIK3-203ENST00000415541 TRPM2O94759 1503 aa9.52□□□□□ -0.89
SIK3-203ENST00000415541 ACEP12821 1306 aa9.52□□□□□ -0.89
SIK3-203ENST00000415541 KCNA6P17658 529 aa9.52□□□□□ -0.89
SIK3-203ENST00000415541 HSPA2P54652 639 aa9.52□□□□□ -0.89
SIK3-203ENST00000415541 CLGNO14967 610 aa9.51□□□□□ -0.89
SIK3-203ENST00000415541 WWC1Q8IX03 1113 aa9.51□□□□□ -0.89
SIK3-203ENST00000415541 RGS22Q8NE09 1264 aa9.51□□□□□ -0.89
SIK3-203ENST00000415541 LMOD3Q0VAK6 560 aa9.51□□□□□ -0.89
SIK3-203ENST00000415541 EXOSC9Q06265 439 aaKnown RBP9.51□□□□□ -0.89
SIK3-203ENST00000415541 CAVIN1Q6NZI2 390 aaKnown RBP9.5□□□□□ -0.89
SIK3-203ENST00000415541 SLC4A10Q6U841 1118 aa9.5□□□□□ -0.89
SIK3-203ENST00000415541 ABCC3O15438 1527 aa9.5□□□□□ -0.89
SIK3-203ENST00000415541 MYOM1P52179 1685 aa9.5□□□□□ -0.89
SIK3-203ENST00000415541 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.5□□□□□ -0.89
SIK3-203ENST00000415541 PDZRN3Q9UPQ7 1066 aa9.5□□□□□ -0.89
SIK3-203ENST00000415541 PLEKHH1Q9ULM0 1364 aa9.5□□□□□ -0.89
SIK3-203ENST00000415541 MAPK8IP2Q13387 824 aaPredicted RBP9.49□□□□□ -0.89
SIK3-203ENST00000415541 AXDND1Q5T1B0 1012 aaPredicted RBP9.49□□□□□ -0.89
SIK3-203ENST00000415541 NGEFQ8N5V2 710 aa9.49□□□□□ -0.89
SIK3-203ENST00000415541 BCCIPQ9P287 314 aaKnown RBP eCLIP9.49□□□□□ -0.89
SIK3-203ENST00000415541 SPHKAPQ2M3C7 1700 aa9.49□□□□□ -0.89
SIK3-203ENST00000415541 ANKRD36BQ8N2N9 1353 aa9.49□□□□□ -0.89
SIK3-203ENST00000415541 ZBTB22O15209 634 aa9.49□□□□□ -0.89
SIK3-203ENST00000415541 TMPOP42166 694 aaKnown RBP9.49□□□□□ -0.89
SIK3-203ENST00000415541 A0A1W2PP64 1363 aa9.49□□□□□ -0.89
SIK3-203ENST00000415541 NUCB2P80303 420 aa9.49□□□□□ -0.89
SIK3-203ENST00000415541 DCTN1Q14203 1278 aa9.49□□□□□ -0.89
SIK3-203ENST00000415541 ZSCAN23Q3MJ62 389 aa9.49□□□□□ -0.89
SIK3-203ENST00000415541 AEBP1Q8IUX7 1158 aa9.49□□□□□ -0.89
SIK3-203ENST00000415541 ASXL1Q8IXJ9 1541 aa9.48□□□□□ -0.89
SIK3-203ENST00000415541 IGSF3O75054 1194 aa9.48□□□□□ -0.89
SIK3-203ENST00000415541 SLFN5Q08AF3 891 aa9.48□□□□□ -0.89
SIK3-203ENST00000415541 ZKSCAN2Q63HK3 967 aa9.48□□□□□ -0.89
SIK3-203ENST00000415541 RBSNQ9H1K0 784 aa9.48□□□□□ -0.89
SIK3-203ENST00000415541 PHF8Q9UPP1 1060 aa9.48□□□□□ -0.89
SIK3-203ENST00000415541 EFCAB6Q5THR3 1501 aa9.48□□□□□ -0.89
SIK3-203ENST00000415541 CLTCL1P53675 1640 aa9.48□□□□□ -0.89
SIK3-203ENST00000415541 CEP152O94986 1710 aa9.48□□□□□ -0.89
SIK3-203ENST00000415541 ZC3H6P61129 1189 aaKnown RBP9.48□□□□□ -0.89
SIK3-203ENST00000415541 FAM193AP78312 1265 aa9.48□□□□□ -0.89
SIK3-203ENST00000415541 ZNF710Q8N1W2 664 aa9.48□□□□□ -0.89
SIK3-203ENST00000415541 NOLC1Q14978 699 aaKnown RBP eCLIP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms