RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 PUS7Q96PZ0 661 aaKnown RBP9.54□□□□□ -0.88
LMBR1-204ENST00000415428 PROM2Q8N271 834 aa9.53□□□□□ -0.88
LMBR1-204ENST00000415428 CD163L1Q9NR16 1453 aa9.53□□□□□ -0.88
LMBR1-204ENST00000415428 R3HDM1Q15032 1099 aaKnown RBP9.52□□□□□ -0.88
LMBR1-204ENST00000415428 C4AP0C0L4 1744 aa9.52□□□□□ -0.88
LMBR1-204ENST00000415428 SBF1O95248 1867 aa9.52□□□□□ -0.88
LMBR1-204ENST00000415428 WASLO00401 505 aaPredicted RBP9.52□□□□□ -0.89
LMBR1-204ENST00000415428 PPIP5K1Q6PFW1 1433 aa9.51□□□□□ -0.89
LMBR1-204ENST00000415428 FOXO3O43524 673 aa9.5□□□□□ -0.89
LMBR1-204ENST00000415428 SLC27A3Q5K4L6 730 aa9.5□□□□□ -0.89
LMBR1-204ENST00000415428 BTG4Q9NY30 223 aa9.5□□□□□ -0.89
LMBR1-204ENST00000415428 NSD3Q9BZ95 1437 aa9.5□□□□□ -0.89
LMBR1-204ENST00000415428 TIAM2Q8IVF5 1701 aa9.5□□□□□ -0.89
LMBR1-204ENST00000415428 KIF20BQ96Q89 1820 aa9.5□□□□□ -0.89
LMBR1-204ENST00000415428 WDR17Q8IZU2 1322 aa9.49□□□□□ -0.89
LMBR1-204ENST00000415428 KIF24Q5T7B8 1368 aa9.49□□□□□ -0.89
LMBR1-204ENST00000415428 CARD10Q9BWT7 1032 aa9.48□□□□□ -0.89
LMBR1-204ENST00000415428 TTC21AQ8NDW8 1320 aa9.48□□□□□ -0.89
LMBR1-204ENST00000415428 SLC15A2Q16348 729 aa9.47□□□□□ -0.89
LMBR1-204ENST00000415428 DNAJC5GQ8N7S2 189 aa9.47□□□□□ -0.89
LMBR1-204ENST00000415428 RTL1A6NKG5 1358 aa9.47□□□□□ -0.89
LMBR1-204ENST00000415428 FAM98CQ17RN3 349 aaKnown RBP9.47□□□□□ -0.89
LMBR1-204ENST00000415428 SYT17Q9BSW7 474 aa9.46□□□□□ -0.89
LMBR1-204ENST00000415428 ANO8Q9HCE9 1232 aaPredicted RBP9.46□□□□□ -0.89
LMBR1-204ENST00000415428 ZC3H4Q9UPT8 1303 aaKnown RBP9.46□□□□□ -0.89
LMBR1-204ENST00000415428 BCANQ96GW7 911 aa9.45□□□□□ -0.9
LMBR1-204ENST00000415428 UBR2Q8IWV8 1755 aa9.45□□□□□ -0.9
LMBR1-204ENST00000415428 TJP1Q07157 1748 aa9.45□□□□□ -0.9
LMBR1-204ENST00000415428 INSRP06213 1382 aa9.45□□□□□ -0.9
LMBR1-204ENST00000415428 CHIC2Q9UKJ5 165 aa9.45□□□□□ -0.9
LMBR1-204ENST00000415428 ATP10DQ9P241 1426 aa9.44□□□□□ -0.9
LMBR1-204ENST00000415428 PSDA5PKW4 1024 aaPredicted RBP9.44□□□□□ -0.9
LMBR1-204ENST00000415428 HSPA6P17066 643 aa9.44□□□□□ -0.9
LMBR1-204ENST00000415428 WAPLQ7Z5K2 1190 aa9.44□□□□□ -0.9
LMBR1-204ENST00000415428 RGPD2P0DJD1 1756 aa9.44□□□□□ -0.9
LMBR1-204ENST00000415428 DCAF8L1A6NGE4 600 aa9.44□□□□□ -0.9
LMBR1-204ENST00000415428 CD2APQ9Y5K6 639 aa9.44□□□□□ -0.9
LMBR1-204ENST00000415428 ANKRD36BQ8N2N9 1353 aa9.43□□□□□ -0.9
LMBR1-204ENST00000415428 APBA3O96018 575 aa9.43□□□□□ -0.9
LMBR1-204ENST00000415428 SMG6Q86US8 1419 aaKnown RBP9.43□□□□□ -0.9
LMBR1-204ENST00000415428 BCORQ6W2J9 1755 aa9.43□□□□□ -0.9
LMBR1-204ENST00000415428 GRIN3BO60391 1043 aa9.43□□□□□ -0.9
LMBR1-204ENST00000415428 MAP3K19Q56UN5 1328 aa9.42□□□□□ -0.9
LMBR1-204ENST00000415428 ZNF326Q5BKZ1 582 aaKnown RBP9.41□□□□□ -0.9
LMBR1-204ENST00000415428 PRELPP51888 382 aa9.41□□□□□ -0.9
LMBR1-204ENST00000415428 ARHGEF25Q86VW2 580 aa9.41□□□□□ -0.9
LMBR1-204ENST00000415428 TRIM37O94972 964 aa9.4□□□□□ -0.9
LMBR1-204ENST00000415428 RBBP6Q7Z6E9 1792 aaKnown RBP9.4□□□□□ -0.9
LMBR1-204ENST00000415428 APLP1P51693 650 aa9.4□□□□□ -0.9
LMBR1-204ENST00000415428 CGNL1Q0VF96 1302 aa9.4□□□□□ -0.9
LMBR1-204ENST00000415428 SCN7AQ01118 1682 aa9.4□□□□□ -0.91
LMBR1-204ENST00000415428 FER1L6Q2WGJ9 1857 aa9.39□□□□□ -0.91
LMBR1-204ENST00000415428 MARCH10Q8NA82 808 aaPredicted RBP9.39□□□□□ -0.91
LMBR1-204ENST00000415428 SCN4AP35499 1836 aa9.39□□□□□ -0.91
LMBR1-204ENST00000415428 GIGYF1O75420 1035 aaPredicted RBP9.39□□□□□ -0.91
LMBR1-204ENST00000415428 PRAM1Q96QH2 718 aa9.39□□□□□ -0.91
LMBR1-204ENST00000415428 MRC1P22897 1456 aa9.38□□□□□ -0.91
LMBR1-204ENST00000415428 PNPLA7Q6ZV29 1317 aa9.38□□□□□ -0.91
LMBR1-204ENST00000415428 FSTL1Q12841 308 aa9.38□□□□□ -0.91
LMBR1-204ENST00000415428 SIPA1L3O60292 1781 aaPredicted RBP9.37□□□□□ -0.91
LMBR1-204ENST00000415428 RBM46Q8TBY0 533 aaKnown RBP9.37□□□□□ -0.91
LMBR1-204ENST00000415428 ARXQ96QS3 562 aa9.37□□□□□ -0.91
LMBR1-204ENST00000415428 TXNRD1Q16881 649 aa9.37□□□□□ -0.91
LMBR1-204ENST00000415428 FHDC1Q9C0D6 1143 aaPredicted RBP9.37□□□□□ -0.91
LMBR1-204ENST00000415428 STK32BQ9NY57 414 aa9.37□□□□□ -0.91
LMBR1-204ENST00000415428 CCDC61Q9Y6R9 512 aa9.37□□□□□ -0.91
LMBR1-204ENST00000415428 EDC4Q6P2E9 1401 aaKnown RBP9.37□□□□□ -0.91
LMBR1-204ENST00000415428 KCNH5Q8NCM2 988 aa9.36□□□□□ -0.91
LMBR1-204ENST00000415428 MPHOSPH9Q99550 1183 aa9.36□□□□□ -0.91
LMBR1-204ENST00000415428 KDRP35968 1356 aa9.36□□□□□ -0.91
LMBR1-204ENST00000415428 RGS19P49795 217 aa9.36□□□□□ -0.91
LMBR1-204ENST00000415428 NUDT16Q96DE0 195 aaKnown RBP9.36□□□□□ -0.91
LMBR1-204ENST00000415428 KIF3CO14782 793 aa9.36□□□□□ -0.91
LMBR1-204ENST00000415428 LARP1Q6PKG0 1096 aaKnown RBP9.36□□□□□ -0.91
LMBR1-204ENST00000415428 N4BP2Q86UW6 1770 aaPredicted RBP9.35□□□□□ -0.91
LMBR1-204ENST00000415428 CHGAP10645 457 aaKnown RBP9.35□□□□□ -0.91
LMBR1-204ENST00000415428 NLRP13Q86W25 1043 aa9.35□□□□□ -0.91
LMBR1-204ENST00000415428 ACEP12821 1306 aa9.35□□□□□ -0.91
LMBR1-204ENST00000415428 SCN11AQ9UI33 1791 aa9.34□□□□□ -0.91
LMBR1-204ENST00000415428 GCP02774 474 aa9.34□□□□□ -0.91
LMBR1-204ENST00000415428 SENP3Q9H4L4 574 aaPredicted RBP9.34□□□□□ -0.91
LMBR1-204ENST00000415428 PRDM11Q9NQV5 511 aa9.34□□□□□ -0.91
LMBR1-204ENST00000415428 LTBP1Q14766 1721 aa9.34□□□□□ -0.91
LMBR1-204ENST00000415428 FLAD1Q8NFF5 587 aa9.34□□□□□ -0.91
LMBR1-204ENST00000415428 DUOX1Q9NRD9 1551 aa9.34□□□□□ -0.92
LMBR1-204ENST00000415428 CABLES1Q8TDN4 633 aa9.33□□□□□ -0.92
LMBR1-204ENST00000415428 AFDNP55196 1824 aaKnown RBP9.33□□□□□ -0.92
LMBR1-204ENST00000415428 ZNF692Q9BU19 519 aaPredicted RBP9.33□□□□□ -0.92
LMBR1-204ENST00000415428 PDE3BQ13370 1112 aa9.32□□□□□ -0.92
LMBR1-204ENST00000415428 SENP3-EIF4A1A0A087X0R7 540 aa9.32□□□□□ -0.92
LMBR1-204ENST00000415428 APLP2Q06481 763 aa9.31□□□□□ -0.92
LMBR1-204ENST00000415428 ZNF827Q17R98 1081 aa9.31□□□□□ -0.92
LMBR1-204ENST00000415428 NKX1-1Q15270 411 aaPredicted RBP9.3□□□□□ -0.92
LMBR1-204ENST00000415428 CFAP70Q5T0N1 1121 aa9.3□□□□□ -0.92
LMBR1-204ENST00000415428 ERBB3P21860 1342 aa9.3□□□□□ -0.92
LMBR1-204ENST00000415428 DDB1Q16531 1140 aa9.3□□□□□ -0.92
LMBR1-204ENST00000415428 TONSLQ96HA7 1378 aa9.3□□□□□ -0.92
LMBR1-204ENST00000415428 FAM50AQ14320 339 aaKnown RBP9.3□□□□□ -0.92
LMBR1-204ENST00000415428 KDM2AQ9Y2K7 1162 aa9.3□□□□□ -0.92
LMBR1-204ENST00000415428 YBX3P16989 372 aaKnown RBP eCLIP9.29□□□□□ -0.929e-8■■■□□ 14.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms