RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 PARD3Q8TEW0 1356 aa16.25■□□□□ 0.19
ATG4B-207ENST00000415107 MAP2P11137 1827 aaKnown RBP16.24■□□□□ 0.19
ATG4B-207ENST00000415107 CDK12Q9NYV4 1490 aaPredicted RBP16.24■□□□□ 0.19
ATG4B-207ENST00000415107 DDX10Q13206 875 aaKnown RBP16.24■□□□□ 0.19
ATG4B-207ENST00000415107 VPS72Q15906 364 aa16.24■□□□□ 0.19
ATG4B-207ENST00000415107 MORC1Q86VD1 984 aa16.24■□□□□ 0.19
ATG4B-207ENST00000415107 PHF23Q9BUL5 403 aaPredicted RBP16.24■□□□□ 0.19
ATG4B-207ENST00000415107 TRPC5Q9UL62 973 aaPredicted RBP16.24■□□□□ 0.19
ATG4B-207ENST00000415107 INSRP06213 1382 aa16.24■□□□□ 0.19
ATG4B-207ENST00000415107 ERBB3P21860 1342 aa16.23■□□□□ 0.19
ATG4B-207ENST00000415107 CHRNA2Q15822 529 aa16.23■□□□□ 0.19
ATG4B-207ENST00000415107 PLEKHG5O94827 1062 aa16.22■□□□□ 0.19
ATG4B-207ENST00000415107 HOXC9P31274 260 aa16.22■□□□□ 0.19
ATG4B-207ENST00000415107 POLKQ9UBT6 870 aa16.22■□□□□ 0.19
ATG4B-207ENST00000415107 AXIN2Q9Y2T1 843 aa16.22■□□□□ 0.19
ATG4B-207ENST00000415107 RGPD5Q99666 1765 aa16.22■□□□□ 0.19
ATG4B-207ENST00000415107 GLI3P10071 1580 aa16.21■□□□□ 0.19
ATG4B-207ENST00000415107 WDR17Q8IZU2 1322 aa16.21■□□□□ 0.19
ATG4B-207ENST00000415107 CRB1P82279 1406 aa16.21■□□□□ 0.19
ATG4B-207ENST00000415107 SOX12O15370 315 aa16.21■□□□□ 0.19
ATG4B-207ENST00000415107 RRS1Q15050 365 aaKnown RBP16.21■□□□□ 0.19
ATG4B-207ENST00000415107 CC2D1BQ5T0F9 858 aaKnown RBP16.2■□□□□ 0.18
ATG4B-207ENST00000415107 NCAPD2Q15021 1401 aa16.19■□□□□ 0.18
ATG4B-207ENST00000415107 EMILIN1Q9Y6C2 1016 aa16.19■□□□□ 0.18
ATG4B-207ENST00000415107 SPATA31A5Q5VU36 1347 aa16.19■□□□□ 0.18
ATG4B-207ENST00000415107 SPATA31A7Q8IWB4 1347 aa16.19■□□□□ 0.18
ATG4B-207ENST00000415107 FBLN1P23142 703 aa16.18■□□□□ 0.18
ATG4B-207ENST00000415107 AMPHP49418 695 aa16.18■□□□□ 0.18
ATG4B-207ENST00000415107 RBM6P78332 1123 aaKnown RBP16.18■□□□□ 0.18
ATG4B-207ENST00000415107 RALBP1Q15311 655 aa16.18■□□□□ 0.18
ATG4B-207ENST00000415107 GJD4Q96KN9 370 aaPredicted RBP16.18■□□□□ 0.18
ATG4B-207ENST00000415107 QTRT2Q9H974 415 aaKnown RBP16.18■□□□□ 0.18
ATG4B-207ENST00000415107 THRAP3Q9Y2W1 955 aaKnown RBP16.18■□□□□ 0.18
ATG4B-207ENST00000415107 PLEKHG2Q9H7P9 1386 aa16.17■□□□□ 0.18
ATG4B-207ENST00000415107 POTEAQ6S8J7 498 aa16.17■□□□□ 0.18
ATG4B-207ENST00000415107 THSD7AQ9UPZ6 1657 aa16.17■□□□□ 0.18
ATG4B-207ENST00000415107 WNK3Q9BYP7 1800 aa16.17■□□□□ 0.18
ATG4B-207ENST00000415107 SPATA31A1Q5TZJ5 1347 aa16.17■□□□□ 0.18
ATG4B-207ENST00000415107 ONECUT3O60422 494 aaPredicted RBP16.16■□□□□ 0.18
ATG4B-207ENST00000415107 CARD10Q9BWT7 1032 aa16.16■□□□□ 0.18
ATG4B-207ENST00000415107 COL3A1P02461 1466 aaPredicted RBP16.16■□□□□ 0.18
ATG4B-207ENST00000415107 LARP1Q6PKG0 1096 aaKnown RBP16.15■□□□□ 0.18
ATG4B-207ENST00000415107 BARGINQ6ZT62 677 aa16.15■□□□□ 0.18
ATG4B-207ENST00000415107 ANKRD24Q8TF21 1146 aa16.15■□□□□ 0.18
ATG4B-207ENST00000415107 RGPD1P0DJD0 1748 aa16.14■□□□□ 0.17
ATG4B-207ENST00000415107 DISP2A7MBM2 1401 aa16.14■□□□□ 0.17
ATG4B-207ENST00000415107 EVA1CP58658 441 aa16.14■□□□□ 0.17
ATG4B-207ENST00000415107 HSP90AB2PQ58FF8 381 aa16.14■□□□□ 0.17
ATG4B-207ENST00000415107 PARP4Q9UKK3 1724 aaKnown RBP16.14■□□□□ 0.17
ATG4B-207ENST00000415107 ZBTB7CA1YPR0 619 aa16.13■□□□□ 0.17
ATG4B-207ENST00000415107 RXRBP28702 533 aa16.13■□□□□ 0.17
ATG4B-207ENST00000415107 PPP2R1AP30153 589 aa16.13■□□□□ 0.17
ATG4B-207ENST00000415107 TNNT2P45379 298 aaPredicted RBP16.13■□□□□ 0.17
ATG4B-207ENST00000415107 MTHFSP49914 203 aa16.13■□□□□ 0.17
ATG4B-207ENST00000415107 STRN4Q9NRL3 753 aa16.13■□□□□ 0.17
ATG4B-207ENST00000415107 TCP11L2Q8N4U5 519 aa16.12■□□□□ 0.17
ATG4B-207ENST00000415107 PRKRIP1Q9H875 184 aaPredicted RBP16.12■□□□□ 0.17
ATG4B-207ENST00000415107 RGS12O14924 1447 aa16.11■□□□□ 0.17
ATG4B-207ENST00000415107 TOM1L2Q6ZVM7 507 aa16.11■□□□□ 0.17
ATG4B-207ENST00000415107 CDCA7Q9BWT1 371 aaPredicted RBP16.11■□□□□ 0.17
ATG4B-207ENST00000415107 MYBBP1AQ9BQG0 1328 aaKnown RBP16.11■□□□□ 0.17
ATG4B-207ENST00000415107 RGPD2P0DJD1 1756 aa16.09■□□□□ 0.17
ATG4B-207ENST00000415107 CSB-PGBD3P0DP91 1061 aa16.09■□□□□ 0.17
ATG4B-207ENST00000415107 EIF4A2Q14240 407 aaKnown RBP16.09■□□□□ 0.17
ATG4B-207ENST00000415107 IGSF1Q8N6C5 1336 aa16.09■□□□□ 0.17
ATG4B-207ENST00000415107 KDRP35968 1356 aa16.09■□□□□ 0.17
ATG4B-207ENST00000415107 LRRC37A3O60309 1634 aa16.08■□□□□ 0.17
ATG4B-207ENST00000415107 PPM1GO15355 546 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-207ENST00000415107 IL13P35225 146 aa16.08■□□□□ 0.16
ATG4B-207ENST00000415107 NBPF6Q5VWK0 638 aa16.07■□□□□ 0.16
ATG4B-207ENST00000415107 NBPF4Q96M43 638 aa16.07■□□□□ 0.16
ATG4B-207ENST00000415107 NLRP2Q9NX02 1062 aa16.07■□□□□ 0.16
ATG4B-207ENST00000415107 CCDC9Q9Y3X0 531 aaKnown RBP16.07■□□□□ 0.16
ATG4B-207ENST00000415107 TNS2Q63HR2 1409 aa16.06■□□□□ 0.16
ATG4B-207ENST00000415107 CFAP53Q96M91 514 aa16.06■□□□□ 0.16
ATG4B-207ENST00000415107 OVOS2A0A0G2JMS6 1433 aa16.05■□□□□ 0.16
ATG4B-207ENST00000415107 DIAPH1O60610 1272 aaKnown RBP16.05■□□□□ 0.16
ATG4B-207ENST00000415107 FAM98CQ17RN3 349 aaKnown RBP16.05■□□□□ 0.16
ATG4B-207ENST00000415107 EYA1Q99502 592 aa16.05■□□□□ 0.16
ATG4B-207ENST00000415107 PKD1L3Q7Z443 1732 aa16.05■□□□□ 0.16
ATG4B-207ENST00000415107 IL2RBP14784 551 aa16.04■□□□□ 0.16
ATG4B-207ENST00000415107 LTV1Q96GA3 475 aaPredicted RBP16.04■□□□□ 0.16
ATG4B-207ENST00000415107 MEGF6O75095 1541 aa16.04■□□□□ 0.16
ATG4B-207ENST00000415107 BCL9O00512 1426 aa16.03■□□□□ 0.16
ATG4B-207ENST00000415107 SEPT12Q8IYM1 358 aa16.03■□□□□ 0.16
ATG4B-207ENST00000415107 BRWD3Q6RI45 1802 aa16.03■□□□□ 0.16
ATG4B-207ENST00000415107 ANP32CO43423 234 aa16.02■□□□□ 0.16
ATG4B-207ENST00000415107 USP35Q9P2H5 1018 aa16.02■□□□□ 0.16
ATG4B-207ENST00000415107 SHANK3Q9BYB0 1731 aa16.02■□□□□ 0.15
ATG4B-207ENST00000415107 CNGB1Q14028 1251 aaPredicted RBP16.01■□□□□ 0.15
ATG4B-207ENST00000415107 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.01■□□□□ 0.15
ATG4B-207ENST00000415107 NUDCQ9Y266 331 aa16■□□□□ 0.15
ATG4B-207ENST00000415107 DDB1Q16531 1140 aa15.99■□□□□ 0.15
ATG4B-207ENST00000415107 RAPGEF4Q8WZA2 1011 aa15.99■□□□□ 0.15
ATG4B-207ENST00000415107 TATP17735 454 aaPredicted RBP15.97■□□□□ 0.15
ATG4B-207ENST00000415107 KRT27Q7Z3Y8 459 aa15.97■□□□□ 0.15
ATG4B-207ENST00000415107 USHBP1Q8N6Y0 703 aa15.97■□□□□ 0.15
ATG4B-207ENST00000415107 EXOC5O00471 708 aa15.96■□□□□ 0.15
ATG4B-207ENST00000415107 SULT6B1Q6IMI4 303 aa15.96■□□□□ 0.15
ATG4B-207ENST00000415107 ILDR2Q71H61 639 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms