RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 NUDT16Q96DE0 195 aaKnown RBP19.83■□□□□ 0.77
RAPGEF1-204ENST00000414781 SHANK3Q9BYB0 1731 aa19.82■□□□□ 0.76
RAPGEF1-204ENST00000414781 ABTB2Q8N961 1025 aa19.82■□□□□ 0.76
RAPGEF1-204ENST00000414781 PCGF6Q9BYE7 350 aa19.82■□□□□ 0.76
RAPGEF1-204ENST00000414781 HSPA6P17066 643 aa19.8■□□□□ 0.76
RAPGEF1-204ENST00000414781 MARCH10Q8NA82 808 aaPredicted RBP19.8■□□□□ 0.76
RAPGEF1-204ENST00000414781 GCP02774 474 aa19.79■□□□□ 0.76
RAPGEF1-204ENST00000414781 NLRP13Q86W25 1043 aa19.79■□□□□ 0.76
RAPGEF1-204ENST00000414781 GRIN3BO60391 1043 aa19.78■□□□□ 0.76
RAPGEF1-204ENST00000414781 ACEP12821 1306 aa19.77■□□□□ 0.76
RAPGEF1-204ENST00000414781 TOM1L2Q6ZVM7 507 aa19.77■□□□□ 0.76
RAPGEF1-204ENST00000414781 PELP1Q8IZL8 1130 aaKnown RBP19.77■□□□□ 0.76
RAPGEF1-204ENST00000414781 MPHOSPH9Q99550 1183 aa19.77■□□□□ 0.76
RAPGEF1-204ENST00000414781 POLD1P28340 1107 aa19.76■□□□□ 0.75
RAPGEF1-204ENST00000414781 SLC16A10Q8TF71 515 aa19.75■□□□□ 0.75
RAPGEF1-204ENST00000414781 PLEKHG3A1L390 1219 aa19.74■□□□□ 0.75
RAPGEF1-204ENST00000414781 CCDC61Q9Y6R9 512 aa19.74■□□□□ 0.75
RAPGEF1-204ENST00000414781 KLHL34Q8N239 644 aa19.73■□□□□ 0.75
RAPGEF1-204ENST00000414781 ATP10DQ9P241 1426 aa19.73■□□□□ 0.75
RAPGEF1-204ENST00000414781 WDR17Q8IZU2 1322 aa19.73■□□□□ 0.75
RAPGEF1-204ENST00000414781 BRD4O60885 1362 aaPredicted RBP19.72■□□□□ 0.75
RAPGEF1-204ENST00000414781 GPBP1L1Q9HC44 474 aaPredicted RBP19.71■□□□□ 0.75
RAPGEF1-204ENST00000414781 PAPPAQ13219 1627 aa19.71■□□□□ 0.75
RAPGEF1-204ENST00000414781 CDK19Q9BWU1 502 aa19.7■□□□□ 0.74
RAPGEF1-204ENST00000414781 AKAP12Q02952 1782 aa19.7■□□□□ 0.74
RAPGEF1-204ENST00000414781 TOPAZ1Q8N9V7 1692 aa19.69■□□□□ 0.74
RAPGEF1-204ENST00000414781 ZBTB7CA1YPR0 619 aa19.69■□□□□ 0.74
RAPGEF1-204ENST00000414781 EXOC5O00471 708 aa19.69■□□□□ 0.74
RAPGEF1-204ENST00000414781 WNK3Q9BYP7 1800 aa19.67■□□□□ 0.74
RAPGEF1-204ENST00000414781 GOLGB1Q14789 3259 aaKnown RBP19.66■□□□□ 0.74
RAPGEF1-204ENST00000414781 ZNF827Q17R98 1081 aa19.66■□□□□ 0.74
RAPGEF1-204ENST00000414781 CARD10Q9BWT7 1032 aa19.66■□□□□ 0.74
RAPGEF1-204ENST00000414781 TNS2Q63HR2 1409 aa19.66■□□□□ 0.74
RAPGEF1-204ENST00000414781 NLGN2Q8NFZ4 835 aa19.65■□□□□ 0.74
RAPGEF1-204ENST00000414781 SLIT3O75094 1523 aa19.65■□□□□ 0.74
RAPGEF1-204ENST00000414781 NHSQ6T4R5 1651 aa19.65■□□□□ 0.74
RAPGEF1-204ENST00000414781 YBX3P16989 372 aaKnown RBP eCLIP19.64■□□□□ 0.73
RAPGEF1-204ENST00000414781 STAC3Q96MF2 364 aa19.64■□□□□ 0.73
RAPGEF1-204ENST00000414781 CCDC7Q96M83 1385 aa19.63■□□□□ 0.73
RAPGEF1-204ENST00000414781 ADCY9O60503 1353 aa19.62■□□□□ 0.73
RAPGEF1-204ENST00000414781 NLRP6P59044 892 aa19.62■□□□□ 0.73
RAPGEF1-204ENST00000414781 AKT1S1Q96B36 256 aa19.62■□□□□ 0.73
RAPGEF1-204ENST00000414781 ARHGEF28Q8N1W1 1705 aaKnown RBP19.62■□□□□ 0.73
RAPGEF1-204ENST00000414781 CSB-PGBD3P0DP91 1061 aa19.61■□□□□ 0.73
RAPGEF1-204ENST00000414781 COL24A1Q17RW2 1714 aa19.61■□□□□ 0.73
RAPGEF1-204ENST00000414781 USP6P35125 1406 aa19.6■□□□□ 0.73
RAPGEF1-204ENST00000414781 CPSF1Q10570 1443 aaKnown RBP19.6■□□□□ 0.73
RAPGEF1-204ENST00000414781 APLP1P51693 650 aa19.6■□□□□ 0.73
RAPGEF1-204ENST00000414781 SLC27A3Q5K4L6 730 aa19.6■□□□□ 0.73
RAPGEF1-204ENST00000414781 AXIN2Q9Y2T1 843 aa19.6■□□□□ 0.73
RAPGEF1-204ENST00000414781 ABCC6O95255 1503 aa19.59■□□□□ 0.73
RAPGEF1-204ENST00000414781 PPIP5K1Q6PFW1 1433 aa19.59■□□□□ 0.73
RAPGEF1-204ENST00000414781 PNPLA7Q6ZV29 1317 aa19.58■□□□□ 0.73
RAPGEF1-204ENST00000414781 COL18A1P39060 1754 aa19.58■□□□□ 0.73
RAPGEF1-204ENST00000414781 ACSBG1Q96GR2 724 aa19.58■□□□□ 0.72
RAPGEF1-204ENST00000414781 LRRC4BQ9NT99 713 aa19.58■□□□□ 0.72
RAPGEF1-204ENST00000414781 QSER1Q2KHR3 1735 aa19.58■□□□□ 0.72
RAPGEF1-204ENST00000414781 TRPM1Q7Z4N2 1603 aa19.56■□□□□ 0.72
RAPGEF1-204ENST00000414781 ARHGEF25Q86VW2 580 aa19.56■□□□□ 0.72
RAPGEF1-204ENST00000414781 TFCP2L1Q9NZI6 479 aa19.56■□□□□ 0.72
RAPGEF1-204ENST00000414781 KCNH5Q8NCM2 988 aa19.55■□□□□ 0.72
RAPGEF1-204ENST00000414781 ZNF526Q8TF50 670 aaPredicted RBP19.55■□□□□ 0.72
RAPGEF1-204ENST00000414781 KDM2AQ9Y2K7 1162 aa19.55■□□□□ 0.72
RAPGEF1-204ENST00000414781 DCAF11Q8TEB1 546 aa19.54■□□□□ 0.72
RAPGEF1-204ENST00000414781 SRPK2P78362 688 aaKnown RBP19.53■□□□□ 0.72
RAPGEF1-204ENST00000414781 BTAF1O14981 1849 aa19.51■□□□□ 0.71
RAPGEF1-204ENST00000414781 CD2APQ9Y5K6 639 aa19.51■□□□□ 0.71
RAPGEF1-204ENST00000414781 RAB3GAP2Q9H2M9 1393 aa19.51■□□□□ 0.71
RAPGEF1-204ENST00000414781 DNAJC5GQ8N7S2 189 aa19.5■□□□□ 0.71
RAPGEF1-204ENST00000414781 KIF3CO14782 793 aa19.49■□□□□ 0.71
RAPGEF1-204ENST00000414781 IL2RBP14784 551 aa19.47■□□□□ 0.71
RAPGEF1-204ENST00000414781 PRELPP51888 382 aa19.47■□□□□ 0.71
RAPGEF1-204ENST00000414781 PIK3C2AO00443 1686 aa19.46■□□□□ 0.71
RAPGEF1-204ENST00000414781 CAPN15O75808 1086 aa19.46■□□□□ 0.71
RAPGEF1-204ENST00000414781 COL13A1Q5TAT6 717 aaPredicted RBP19.45■□□□□ 0.7
RAPGEF1-204ENST00000414781 CABP1Q9NZU7 370 aa19.45■□□□□ 0.7
RAPGEF1-204ENST00000414781 TOMM70O94826 608 aa19.44■□□□□ 0.7
RAPGEF1-204ENST00000414781 CABP2Q9NPB3 220 aa19.44■□□□□ 0.7
RAPGEF1-204ENST00000414781 QRICH2Q9H0J4 1663 aa19.43■□□□□ 0.7
RAPGEF1-204ENST00000414781 MSH5O43196 834 aa19.43■□□□□ 0.7
RAPGEF1-204ENST00000414781 TNS4Q8IZW8 715 aa19.43■□□□□ 0.7
RAPGEF1-204ENST00000414781 NLRP2Q9NX02 1062 aa19.43■□□□□ 0.7
RAPGEF1-204ENST00000414781 ERBB3P21860 1342 aa19.42■□□□□ 0.7
RAPGEF1-204ENST00000414781 NFAT5O94916 1531 aa19.41■□□□□ 0.7
RAPGEF1-204ENST00000414781 SOX12O15370 315 aa19.41■□□□□ 0.7
RAPGEF1-204ENST00000414781 TTC21AQ8NDW8 1320 aa19.41■□□□□ 0.7
RAPGEF1-204ENST00000414781 HMGB2P26583 209 aaKnown RBP19.4■□□□□ 0.7
RAPGEF1-204ENST00000414781 COL23A1Q86Y22 540 aaPredicted RBP19.4■□□□□ 0.7
RAPGEF1-204ENST00000414781 JMYQ8N9B5 988 aa19.4■□□□□ 0.7
RAPGEF1-204ENST00000414781 TTC21BQ7Z4L5 1316 aa19.4■□□□□ 0.7
RAPGEF1-204ENST00000414781 CENPJQ9HC77 1338 aaPredicted RBP19.4■□□□□ 0.7
RAPGEF1-204ENST00000414781 TUBGCP6Q96RT7 1819 aa19.39■□□□□ 0.7
RAPGEF1-204ENST00000414781 ZNF692Q9BU19 519 aaPredicted RBP19.39■□□□□ 0.69
RAPGEF1-204ENST00000414781 RGPD5Q99666 1765 aa19.39■□□□□ 0.69
RAPGEF1-204ENST00000414781 MSL1Q68DK7 614 aa19.38■□□□□ 0.69
RAPGEF1-204ENST00000414781 KLRG1Q96E93 195 aa19.38■□□□□ 0.69
RAPGEF1-204ENST00000414781 ANKRD36BQ8N2N9 1353 aa19.37■□□□□ 0.69
RAPGEF1-204ENST00000414781 KCNQ4P56696 695 aa19.37■□□□□ 0.69
RAPGEF1-204ENST00000414781 FLAD1Q8NFF5 587 aa19.37■□□□□ 0.69
RAPGEF1-204ENST00000414781 CCNL1Q9UK58 526 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms