RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 USP31Q70CQ4 1352 aa23.54■■□□□ 1.36
SCAMP4-204ENST00000414057 WDR17Q8IZU2 1322 aa23.54■■□□□ 1.36
SCAMP4-204ENST00000414057 RGPD1P0DJD0 1748 aa23.53■■□□□ 1.36
SCAMP4-204ENST00000414057 TESK2Q96S53 571 aa23.53■■□□□ 1.36
SCAMP4-204ENST00000414057 MON2Q7Z3U7 1717 aa23.52■■□□□ 1.36
SCAMP4-204ENST00000414057 CD163L1Q9NR16 1453 aa23.52■■□□□ 1.36
SCAMP4-204ENST00000414057 TRIM37O94972 964 aa23.52■■□□□ 1.36
SCAMP4-204ENST00000414057 CSB-PGBD3P0DP91 1061 aa23.52■■□□□ 1.36
SCAMP4-204ENST00000414057 EN1Q05925 392 aaPredicted RBP23.52■■□□□ 1.36
SCAMP4-204ENST00000414057 CDCA7Q9BWT1 371 aaPredicted RBP23.52■■□□□ 1.36
SCAMP4-204ENST00000414057 AXIN2Q9Y2T1 843 aa23.52■■□□□ 1.36
SCAMP4-204ENST00000414057 EDC4Q6P2E9 1401 aaKnown RBP23.52■■□□□ 1.36
SCAMP4-204ENST00000414057 DISP2A7MBM2 1401 aa23.51■■□□□ 1.35
SCAMP4-204ENST00000414057 NME9Q86XW9 330 aa23.5■■□□□ 1.35
SCAMP4-204ENST00000414057 TMF1P82094 1093 aa23.49■■□□□ 1.35
SCAMP4-204ENST00000414057 DDB1Q16531 1140 aa23.49■■□□□ 1.35
SCAMP4-204ENST00000414057 A0A1W2PP64 1363 aa23.49■■□□□ 1.35
SCAMP4-204ENST00000414057 APBA3O96018 575 aa23.48■■□□□ 1.35
SCAMP4-204ENST00000414057 CARD10Q9BWT7 1032 aa23.48■■□□□ 1.35
SCAMP4-204ENST00000414057 NFAT5O94916 1531 aa23.47■■□□□ 1.35
SCAMP4-204ENST00000414057 ABCC6O95255 1503 aa23.47■■□□□ 1.35
SCAMP4-204ENST00000414057 COL18A1P39060 1754 aa23.47■■□□□ 1.35
SCAMP4-204ENST00000414057 EIF4G2P78344 907 aaKnown RBP eCLIP23.47■■□□□ 1.35
SCAMP4-204ENST00000414057 PARD3Q8TEW0 1356 aa23.46■■□□□ 1.35
SCAMP4-204ENST00000414057 USP47Q96K76 1375 aa23.46■■□□□ 1.35
SCAMP4-204ENST00000414057 PARP4Q9UKK3 1724 aaKnown RBP23.46■■□□□ 1.35
SCAMP4-204ENST00000414057 CDCA8Q53HL2 280 aa23.46■■□□□ 1.35
SCAMP4-204ENST00000414057 CCDC7Q96M83 1385 aa23.44■■□□□ 1.34
SCAMP4-204ENST00000414057 OVOS2A0A0G2JMS6 1433 aa23.43■■□□□ 1.34
SCAMP4-204ENST00000414057 OVOS2A0A0J9YW53 1432 aa23.43■■□□□ 1.34
SCAMP4-204ENST00000414057 OVOS2Q6IE36 1432 aa23.43■■□□□ 1.34
SCAMP4-204ENST00000414057 EZH2Q15910 746 aaKnown RBP23.43■■□□□ 1.34
SCAMP4-204ENST00000414057 CAMKK2Q96RR4 588 aa23.43■■□□□ 1.34
SCAMP4-204ENST00000414057 USP54Q70EL1 1684 aa23.42■■□□□ 1.34
SCAMP4-204ENST00000414057 TNS1Q9HBL0 1735 aaKnown RBP23.42■■□□□ 1.34
SCAMP4-204ENST00000414057 COG3Q96JB2 828 aa23.41■■□□□ 1.34
SCAMP4-204ENST00000414057 ANKRD36BQ8N2N9 1353 aa23.4■■□□□ 1.34
SCAMP4-204ENST00000414057 EXOC5O00471 708 aa23.39■■□□□ 1.34
SCAMP4-204ENST00000414057 ERBB3P21860 1342 aa23.39■■□□□ 1.33
SCAMP4-204ENST00000414057 HSPA5P11021 654 aaKnown RBP23.38■■□□□ 1.33
SCAMP4-204ENST00000414057 PSDA5PKW4 1024 aaPredicted RBP23.37■■□□□ 1.33
SCAMP4-204ENST00000414057 NLRP2Q9NX02 1062 aa23.37■■□□□ 1.33
SCAMP4-204ENST00000414057 LRRC37A3O60309 1634 aa23.36■■□□□ 1.33
SCAMP4-204ENST00000414057 NBPF14Q5TI25 921 aa23.36■■□□□ 1.33
SCAMP4-204ENST00000414057 ANKRD24Q8TF21 1146 aa23.36■■□□□ 1.33
SCAMP4-204ENST00000414057 SRCAPQ6ZRS2 3230 aa23.35■■□□□ 1.33
SCAMP4-204ENST00000414057 R3HDM1Q15032 1099 aaKnown RBP23.35■■□□□ 1.33
SCAMP4-204ENST00000414057 DIEXFQ68CQ4 756 aaKnown RBP23.35■■□□□ 1.33
SCAMP4-204ENST00000414057 RGPD5Q99666 1765 aa23.35■■□□□ 1.33
SCAMP4-204ENST00000414057 BCL9O00512 1426 aa23.34■■□□□ 1.33
SCAMP4-204ENST00000414057 MARCH10Q8NA82 808 aaPredicted RBP23.34■■□□□ 1.33
SCAMP4-204ENST00000414057 IP6K1Q92551 441 aa23.34■■□□□ 1.33
SCAMP4-204ENST00000414057 BCL11BQ9C0K0 894 aaPredicted RBP23.34■■□□□ 1.33
SCAMP4-204ENST00000414057 IL2RBP14784 551 aa23.32■■□□□ 1.32
SCAMP4-204ENST00000414057 PLSCR1O15162 318 aa23.31■■□□□ 1.32
SCAMP4-204ENST00000414057 LTN1O94822 1766 aa23.31■■□□□ 1.32
SCAMP4-204ENST00000414057 PEAK1Q9H792 1746 aa23.31■■□□□ 1.32
SCAMP4-204ENST00000414057 WNK3Q9BYP7 1800 aa23.3■■□□□ 1.32
SCAMP4-204ENST00000414057 AMPHP49418 695 aa23.3■■□□□ 1.32
SCAMP4-204ENST00000414057 TNS2Q63HR2 1409 aa23.3■■□□□ 1.32
SCAMP4-204ENST00000414057 FYB1O15117 783 aa23.28■■□□□ 1.32
SCAMP4-204ENST00000414057 MAP3K19Q56UN5 1328 aa23.27■■□□□ 1.32
SCAMP4-204ENST00000414057 LRP5O75197 1615 aa23.26■■□□□ 1.31
SCAMP4-204ENST00000414057 HOXC9P31274 260 aa23.26■■□□□ 1.31
SCAMP4-204ENST00000414057 LTV1Q96GA3 475 aaPredicted RBP23.25■■□□□ 1.31
SCAMP4-204ENST00000414057 GGNBP2Q9H3C7 697 aa23.25■■□□□ 1.31
SCAMP4-204ENST00000414057 RREB1Q92766 1687 aa23.25■■□□□ 1.31
SCAMP4-204ENST00000414057 RTL1A6NKG5 1358 aa23.24■■□□□ 1.31
SCAMP4-204ENST00000414057 RGPD3A6NKT7 1758 aaPredicted RBP23.21■■□□□ 1.31
SCAMP4-204ENST00000414057 RGPD4Q7Z3J3 1758 aa23.21■■□□□ 1.31
SCAMP4-204ENST00000414057 SBF2Q86WG5 1849 aa23.21■■□□□ 1.31
SCAMP4-204ENST00000414057 FBLN1P23142 703 aa23.2■■□□□ 1.3
SCAMP4-204ENST00000414057 FAM208AQ9UK61 1670 aaKnown RBP23.2■■□□□ 1.3
SCAMP4-204ENST00000414057 NUP188Q5SRE5 1749 aa23.2■■□□□ 1.3
SCAMP4-204ENST00000414057 RRS1Q15050 365 aaKnown RBP23.19■■□□□ 1.3
SCAMP4-204ENST00000414057 PTF1AQ7RTS3 328 aa23.19■■□□□ 1.3
SCAMP4-204ENST00000414057 SMG6Q86US8 1419 aaKnown RBP23.19■■□□□ 1.3
SCAMP4-204ENST00000414057 KIF24Q5T7B8 1368 aa23.18■■□□□ 1.3
SCAMP4-204ENST00000414057 NSD3Q9BZ95 1437 aa23.17■■□□□ 1.3
SCAMP4-204ENST00000414057 CARD14Q9BXL6 1004 aa23.17■■□□□ 1.3
SCAMP4-204ENST00000414057 WASHC2AQ641Q2 1341 aa23.17■■□□□ 1.3
SCAMP4-204ENST00000414057 KCNQ2O43526 872 aa23.16■■□□□ 1.3
SCAMP4-204ENST00000414057 TXNRD1Q16881 649 aa23.16■■□□□ 1.3
SCAMP4-204ENST00000414057 ACSBG1Q96GR2 724 aa23.16■■□□□ 1.3
SCAMP4-204ENST00000414057 DDX54Q8TDD1 881 aaKnown RBP23.15■■□□□ 1.3
SCAMP4-204ENST00000414057 POLR3GLQ9BT43 218 aa23.15■■□□□ 1.3
SCAMP4-204ENST00000414057 FLT4P35916 1363 aa23.14■■□□□ 1.29
SCAMP4-204ENST00000414057 CGNL1Q0VF96 1302 aa23.14■■□□□ 1.29
SCAMP4-204ENST00000414057 PROM2Q8N271 834 aa23.14■■□□□ 1.29
SCAMP4-204ENST00000414057 INSRP06213 1382 aa23.13■■□□□ 1.29
SCAMP4-204ENST00000414057 ZCRB1Q8TBF4 217 aaKnown RBP23.12■■□□□ 1.29
SCAMP4-204ENST00000414057 KIF20BQ96Q89 1820 aa23.12■■□□□ 1.29
SCAMP4-204ENST00000414057 KIF7Q2M1P5 1343 aa23.12■■□□□ 1.29
SCAMP4-204ENST00000414057 NHSQ6T4R5 1651 aa23.11■■□□□ 1.29
SCAMP4-204ENST00000414057 NBPF6Q5VWK0 638 aa23.11■■□□□ 1.29
SCAMP4-204ENST00000414057 RAPGEF4Q8WZA2 1011 aa23.11■■□□□ 1.29
SCAMP4-204ENST00000414057 NBPF4Q96M43 638 aa23.11■■□□□ 1.29
SCAMP4-204ENST00000414057 SPON1Q9HCB6 807 aa23.11■■□□□ 1.29
SCAMP4-204ENST00000414057 STK32BQ9NY57 414 aa23.11■■□□□ 1.29
SCAMP4-204ENST00000414057 MYOM1P52179 1685 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms