RNA–Protein interactions for RNA: ENST00000413971.5

TOP2B-202, Transcript of DNA topoisomerase II beta, humanhuman

TSL 5

Gene TOP2B, Length 2,049 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-202ENST00000413971 PRIM1P49642 420 aaKnown RBP6.28□□□□□ -1.4
TOP2B-202ENST00000413971 PTGDRQ13258 359 aa6.28□□□□□ -1.4
TOP2B-202ENST00000413971 GPCPD1Q9NPB8 672 aa6.28□□□□□ -1.4
TOP2B-202ENST00000413971 KIAA1522Q9P206 1035 aaPredicted RBP6.28□□□□□ -1.4
TOP2B-202ENST00000413971 UTRNP46939 3433 aa6.28□□□□□ -1.4
TOP2B-202ENST00000413971 ADGBQ8N7X0 1667 aa6.28□□□□□ -1.4
TOP2B-202ENST00000413971 CLCN1P35523 988 aa6.28□□□□□ -1.4
TOP2B-202ENST00000413971 CFAP70Q5T0N1 1121 aa6.28□□□□□ -1.4
TOP2B-202ENST00000413971 DHX37Q8IY37 1157 aaKnown RBP6.28□□□□□ -1.4
TOP2B-202ENST00000413971 BANK1Q8NDB2 785 aa6.28□□□□□ -1.4
TOP2B-202ENST00000413971 GJD4Q96KN9 370 aaPredicted RBP6.28□□□□□ -1.4
TOP2B-202ENST00000413971 SLC26A8Q96RN1 970 aa6.28□□□□□ -1.4
TOP2B-202ENST00000413971 PPP1R1BQ9UD71 204 aaPredicted RBP6.28□□□□□ -1.4
TOP2B-202ENST00000413971 PNPLA6Q8IY17 1366 aa6.28□□□□□ -1.4
TOP2B-202ENST00000413971 UNC13BO14795 1591 aa6.27□□□□□ -1.41
TOP2B-202ENST00000413971 HNRNPMP52272 730 aaKnown RBP eCLIP6.27□□□□□ -1.41
TOP2B-202ENST00000413971 SRPK2P78362 688 aaKnown RBP6.27□□□□□ -1.41
TOP2B-202ENST00000413971 ADAMTS19Q8TE59 1207 aa6.27□□□□□ -1.41
TOP2B-202ENST00000413971 TBC1D2BQ9UPU7 963 aa6.27□□□□□ -1.41
TOP2B-202ENST00000413971 TROQ12816 1431 aaPredicted RBP6.27□□□□□ -1.41
TOP2B-202ENST00000413971 RBM47A0AV96 593 aaKnown RBP6.26□□□□□ -1.41
TOP2B-202ENST00000413971 CLK2P49760 499 aaKnown RBP6.26□□□□□ -1.41
TOP2B-202ENST00000413971 DDX12PQ92771 950 aa6.26□□□□□ -1.41
TOP2B-202ENST00000413971 UBR1Q8IWV7 1749 aa6.26□□□□□ -1.41
TOP2B-202ENST00000413971 CAMTA1Q9Y6Y1 1673 aa6.26□□□□□ -1.41
TOP2B-202ENST00000413971 MAST1Q9Y2H9 1570 aa6.26□□□□□ -1.41
TOP2B-202ENST00000413971 NCOA3Q9Y6Q9 1424 aa6.26□□□□□ -1.41
TOP2B-202ENST00000413971 KIF3BO15066 747 aa6.26□□□□□ -1.41
TOP2B-202ENST00000413971 MAP3K13O43283 966 aa6.26□□□□□ -1.41
TOP2B-202ENST00000413971 ATF3P18847 181 aa6.26□□□□□ -1.41
TOP2B-202ENST00000413971 EN1Q05925 392 aaPredicted RBP6.26□□□□□ -1.41
TOP2B-202ENST00000413971 MRRFQ96E11 262 aaKnown RBP6.26□□□□□ -1.41
TOP2B-202ENST00000413971 POLR3GLQ9BT43 218 aa6.26□□□□□ -1.41
TOP2B-202ENST00000413971 PREX2Q70Z35 1606 aa6.25□□□□□ -1.41
TOP2B-202ENST00000413971 INO80Q9ULG1 1556 aaPredicted RBP6.25□□□□□ -1.41
TOP2B-202ENST00000413971 CLIP1P30622 1438 aa6.25□□□□□ -1.41
TOP2B-202ENST00000413971 NLRP7Q8WX94 980 aa6.25□□□□□ -1.41
TOP2B-202ENST00000413971 C19orf44Q9H6X5 657 aa6.25□□□□□ -1.41
TOP2B-202ENST00000413971 RALGAPBQ86X10 1494 aa6.25□□□□□ -1.41
TOP2B-202ENST00000413971 WWC1Q8IX03 1113 aa6.25□□□□□ -1.41
TOP2B-202ENST00000413971 TET3O43151 1660 aa6.24□□□□□ -1.41
TOP2B-202ENST00000413971 DHX29Q7Z478 1369 aaKnown RBP6.24□□□□□ -1.41
TOP2B-202ENST00000413971 COL13A1Q5TAT6 717 aaPredicted RBP6.24□□□□□ -1.41
TOP2B-202ENST00000413971 HDGFL1Q5TGJ6 251 aa6.24□□□□□ -1.41
TOP2B-202ENST00000413971 PHF12Q96QT6 1004 aa6.24□□□□□ -1.41
TOP2B-202ENST00000413971 VRTNQ9H8Y1 702 aa6.24□□□□□ -1.41
TOP2B-202ENST00000413971 MROH1Q8NDA8 1641 aa6.24□□□□□ -1.41
TOP2B-202ENST00000413971 SYCP2Q9BX26 1530 aa6.24□□□□□ -1.41
TOP2B-202ENST00000413971 TMEM2Q9UHN6 1383 aa6.24□□□□□ -1.41
TOP2B-202ENST00000413971 CLCN6P51797 869 aa6.23□□□□□ -1.41
TOP2B-202ENST00000413971 SPON1Q9HCB6 807 aa6.23□□□□□ -1.41
TOP2B-202ENST00000413971 CAMSAP2Q08AD1 1489 aa6.23□□□□□ -1.41
TOP2B-202ENST00000413971 PTCH1Q13635 1447 aa6.23□□□□□ -1.41
TOP2B-202ENST00000413971 TMEM88BA6NKF7 163 aa6.23□□□□□ -1.41
TOP2B-202ENST00000413971 SMARCA5O60264 1052 aaPredicted RBP6.23□□□□□ -1.41
TOP2B-202ENST00000413971 FAM217BQ9NTX9 383 aaPredicted RBP6.23□□□□□ -1.41
TOP2B-202ENST00000413971 SPHKAPQ2M3C7 1700 aa6.23□□□□□ -1.41
TOP2B-202ENST00000413971 ARHGAP35Q9NRY4 1499 aa6.23□□□□□ -1.41
TOP2B-202ENST00000413971 ASXL1Q8IXJ9 1541 aa6.22□□□□□ -1.41
TOP2B-202ENST00000413971 ERVK-7P63135 1459 aa6.22□□□□□ -1.41
TOP2B-202ENST00000413971 KCNQ2O43526 872 aa6.22□□□□□ -1.41
TOP2B-202ENST00000413971 HSPA6P17066 643 aa6.22□□□□□ -1.41
TOP2B-202ENST00000413971 SEPT12Q8IYM1 358 aa6.22□□□□□ -1.41
TOP2B-202ENST00000413971 LIMD1Q9UGP4 676 aa6.22□□□□□ -1.41
TOP2B-202ENST00000413971 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.22□□□□□ -1.41
TOP2B-202ENST00000413971 MAP3K9P80192 1104 aa6.21□□□□□ -1.41
TOP2B-202ENST00000413971 TMEM259Q4ZIN3 620 aa6.21□□□□□ -1.41
TOP2B-202ENST00000413971 TNS4Q8IZW8 715 aa6.21□□□□□ -1.41
TOP2B-202ENST00000413971 DDX17Q92841 729 aaKnown RBP6.21□□□□□ -1.41
TOP2B-202ENST00000413971 CHD4Q14839 1912 aa6.21□□□□□ -1.42
TOP2B-202ENST00000413971 CDCA8Q53HL2 280 aa6.21□□□□□ -1.42
TOP2B-202ENST00000413971 KRT27Q7Z3Y8 459 aa6.21□□□□□ -1.42
TOP2B-202ENST00000413971 PPP1R12CQ9BZL4 782 aa6.21□□□□□ -1.42
TOP2B-202ENST00000413971 KIAA1107Q9UPP5 1409 aa6.21□□□□□ -1.42
TOP2B-202ENST00000413971 BRWD3Q6RI45 1802 aa6.21□□□□□ -1.42
TOP2B-202ENST00000413971 GPATCH8Q9UKJ3 1502 aaKnown RBP6.21□□□□□ -1.42
TOP2B-202ENST00000413971 FOXK1P85037 733 aa6.2□□□□□ -1.42
TOP2B-202ENST00000413971 EZH2Q15910 746 aaKnown RBP6.2□□□□□ -1.42
TOP2B-202ENST00000413971 TBC1D2Q9BYX2 928 aa6.2□□□□□ -1.42
TOP2B-202ENST00000413971 CDHR5Q9HBB8 845 aa6.2□□□□□ -1.42
TOP2B-202ENST00000413971 CWC22Q9HCG8 908 aaKnown RBP6.2□□□□□ -1.42
TOP2B-202ENST00000413971 GALR2O43603 387 aaPredicted RBP6.2□□□□□ -1.42
TOP2B-202ENST00000413971 FAM161AQ3B820 660 aa6.2□□□□□ -1.42
TOP2B-202ENST00000413971 GLI3P10071 1580 aa6.19□□□□□ -1.42
TOP2B-202ENST00000413971 GOLGA2Q08379 1002 aa6.19□□□□□ -1.42
TOP2B-202ENST00000413971 PPP2R2DQ66LE6 453 aa6.19□□□□□ -1.42
TOP2B-202ENST00000413971 PLPP6Q8IY26 295 aa6.19□□□□□ -1.42
TOP2B-202ENST00000413971 KIF12Q96FN5 646 aa6.19□□□□□ -1.42
TOP2B-202ENST00000413971 DISP2A7MBM2 1401 aa6.19□□□□□ -1.42
TOP2B-202ENST00000413971 LMOD1P29536 600 aaPredicted RBP6.18□□□□□ -1.42
TOP2B-202ENST00000413971 DNAJC14Q6Y2X3 702 aaPredicted RBP6.18□□□□□ -1.42
TOP2B-202ENST00000413971 GNEQ9Y223 722 aaKnown RBP6.18□□□□□ -1.42
TOP2B-202ENST00000413971 CHD2O14647 1828 aaKnown RBP6.18□□□□□ -1.42
TOP2B-202ENST00000413971 CDC42BPAQ5VT25 1732 aa6.18□□□□□ -1.42
TOP2B-202ENST00000413971 PALM3A6NDB9 673 aaPredicted RBP6.18□□□□□ -1.42
TOP2B-202ENST00000413971 TCF3P15923 654 aa6.18□□□□□ -1.42
TOP2B-202ENST00000413971 ZNF16P17020 682 aaPredicted RBP6.18□□□□□ -1.42
TOP2B-202ENST00000413971 NOM1Q5C9Z4 860 aaKnown RBP6.18□□□□□ -1.42
TOP2B-202ENST00000413971 UNC5CLQ8IV45 518 aa6.18□□□□□ -1.42
TOP2B-202ENST00000413971 CAMKK2Q96RR4 588 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms