RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 NFAT5O94916 1531 aa27.36■■□□□ 1.97
CPSF7-204ENST00000413232 PEAK1Q9H792 1746 aa27.36■■□□□ 1.97
CPSF7-204ENST00000413232 LRRC37A3O60309 1634 aa27.36■■□□□ 1.97
CPSF7-204ENST00000413232 TONSLQ96HA7 1378 aa27.35■■□□□ 1.97
CPSF7-204ENST00000413232 TOM1L2Q6ZVM7 507 aa27.35■■□□□ 1.97
CPSF7-204ENST00000413232 RREB1Q92766 1687 aa27.35■■□□□ 1.97
CPSF7-204ENST00000413232 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.33■■□□□ 1.97
CPSF7-204ENST00000413232 KCNH5Q8NCM2 988 aa27.33■■□□□ 1.97
CPSF7-204ENST00000413232 WDR17Q8IZU2 1322 aa27.33■■□□□ 1.97
CPSF7-204ENST00000413232 NUP188Q5SRE5 1749 aa27.33■■□□□ 1.96
CPSF7-204ENST00000413232 SLC12A5Q9H2X9 1139 aa27.32■■□□□ 1.96
CPSF7-204ENST00000413232 NME9Q86XW9 330 aa27.3■■□□□ 1.96
CPSF7-204ENST00000413232 USP54Q70EL1 1684 aa27.3■■□□□ 1.96
CPSF7-204ENST00000413232 TMC1Q8TDI8 760 aa27.29■■□□□ 1.96
CPSF7-204ENST00000413232 USP31Q70CQ4 1352 aa27.28■■□□□ 1.96
CPSF7-204ENST00000413232 PARD3Q8TEW0 1356 aa27.28■■□□□ 1.96
CPSF7-204ENST00000413232 DDB1Q16531 1140 aa27.28■■□□□ 1.96
CPSF7-204ENST00000413232 PTF1AQ7RTS3 328 aa27.27■■□□□ 1.96
CPSF7-204ENST00000413232 LTN1O94822 1766 aa27.27■■□□□ 1.96
CPSF7-204ENST00000413232 OVOS2A0A0G2JMS6 1433 aa27.26■■□□□ 1.95
CPSF7-204ENST00000413232 OVOS2A0A0J9YW53 1432 aa27.26■■□□□ 1.95
CPSF7-204ENST00000413232 OVOS2Q6IE36 1432 aa27.26■■□□□ 1.95
CPSF7-204ENST00000413232 MARCH10Q8NA82 808 aaPredicted RBP27.25■■□□□ 1.95
CPSF7-204ENST00000413232 CARD10Q9BWT7 1032 aa27.25■■□□□ 1.95
CPSF7-204ENST00000413232 CSB-PGBD3P0DP91 1061 aa27.24■■□□□ 1.95
CPSF7-204ENST00000413232 TESK2Q96S53 571 aa27.24■■□□□ 1.95
CPSF7-204ENST00000413232 A0A1W2PP64 1363 aa27.22■■□□□ 1.95
CPSF7-204ENST00000413232 ST20-MTHFSA0A0A6YYL1 179 aa27.21■■□□□ 1.95
CPSF7-204ENST00000413232 TRIM26Q12899 539 aaPredicted RBP27.21■■□□□ 1.95
CPSF7-204ENST00000413232 HDGFL2Q7Z4V5 671 aaPredicted RBP27.21■■□□□ 1.95
CPSF7-204ENST00000413232 ABCC6O95255 1503 aa27.21■■□□□ 1.95
CPSF7-204ENST00000413232 EDC4Q6P2E9 1401 aaKnown RBP27.2■■□□□ 1.94
CPSF7-204ENST00000413232 C11orf95C9JLR9 678 aaPredicted RBP27.19■■□□□ 1.94
CPSF7-204ENST00000413232 PUS7Q96PZ0 661 aaKnown RBP27.19■■□□□ 1.94
CPSF7-204ENST00000413232 CDCA7Q9BWT1 371 aaPredicted RBP27.19■■□□□ 1.94
CPSF7-204ENST00000413232 RGPD3A6NKT7 1758 aaPredicted RBP27.17■■□□□ 1.94
CPSF7-204ENST00000413232 RGPD4Q7Z3J3 1758 aa27.17■■□□□ 1.94
CPSF7-204ENST00000413232 TERF2IPQ9NYB0 399 aa27.16■■□□□ 1.94
CPSF7-204ENST00000413232 ERBB3P21860 1342 aa27.16■■□□□ 1.94
CPSF7-204ENST00000413232 CCDC7Q96M83 1385 aa27.15■■□□□ 1.94
CPSF7-204ENST00000413232 BCL11BQ9C0K0 894 aaPredicted RBP27.15■■□□□ 1.94
CPSF7-204ENST00000413232 BCL9O00512 1426 aa27.15■■□□□ 1.94
CPSF7-204ENST00000413232 PLSCR1O15162 318 aa27.14■■□□□ 1.94
CPSF7-204ENST00000413232 KAT6BQ8WYB5 2073 aa27.13■■□□□ 1.93
CPSF7-204ENST00000413232 EXOC5O00471 708 aa27.13■■□□□ 1.93
CPSF7-204ENST00000413232 NBPF14Q5TI25 921 aa27.13■■□□□ 1.93
CPSF7-204ENST00000413232 PROM2Q8N271 834 aa27.13■■□□□ 1.93
CPSF7-204ENST00000413232 NLRP2Q9NX02 1062 aa27.11■■□□□ 1.93
CPSF7-204ENST00000413232 TNS2Q63HR2 1409 aa27.1■■□□□ 1.93
CPSF7-204ENST00000413232 ANKRD24Q8TF21 1146 aa27.1■■□□□ 1.93
CPSF7-204ENST00000413232 FBLN1P23142 703 aa27.09■■□□□ 1.93
CPSF7-204ENST00000413232 ANO8Q9HCE9 1232 aaPredicted RBP27.09■■□□□ 1.93
CPSF7-204ENST00000413232 KCNQ2O43526 872 aa27.08■■□□□ 1.93
CPSF7-204ENST00000413232 NINLQ9Y2I6 1382 aa27.06■■□□□ 1.92
CPSF7-204ENST00000413232 RGPD2P0DJD1 1756 aa27.05■■□□□ 1.92
CPSF7-204ENST00000413232 IP6K1Q92551 441 aa27.05■■□□□ 1.92
CPSF7-204ENST00000413232 IL2RBP14784 551 aa27.04■■□□□ 1.92
CPSF7-204ENST00000413232 NHSQ6T4R5 1651 aa27.04■■□□□ 1.92
CPSF7-204ENST00000413232 USP47Q96K76 1375 aa27.03■■□□□ 1.92
CPSF7-204ENST00000413232 PDGFDQ9GZP0 370 aaPredicted RBP27.03■■□□□ 1.92
CPSF7-204ENST00000413232 CASZ1Q86V15 1759 aa27.02■■□□□ 1.92
CPSF7-204ENST00000413232 ACSBG1Q96GR2 724 aa27.02■■□□□ 1.92
CPSF7-204ENST00000413232 ANKRD36BQ8N2N9 1353 aa27.01■■□□□ 1.91
CPSF7-204ENST00000413232 MAP3K19Q56UN5 1328 aa27.01■■□□□ 1.91
CPSF7-204ENST00000413232 TXNRD1Q16881 649 aa27.01■■□□□ 1.91
CPSF7-204ENST00000413232 LTV1Q96GA3 475 aaPredicted RBP27.01■■□□□ 1.91
CPSF7-204ENST00000413232 COG3Q96JB2 828 aa27■■□□□ 1.91
CPSF7-204ENST00000413232 SLC24A1O60721 1099 aa26.99■■□□□ 1.91
CPSF7-204ENST00000413232 BTAF1O14981 1849 aa26.99■■□□□ 1.91
CPSF7-204ENST00000413232 FAM208AQ9UK61 1670 aaKnown RBP26.98■■□□□ 1.91
CPSF7-204ENST00000413232 HOXC9P31274 260 aa26.97■■□□□ 1.91
CPSF7-204ENST00000413232 TMF1P82094 1093 aa26.97■■□□□ 1.91
CPSF7-204ENST00000413232 SPON1Q9HCB6 807 aa26.97■■□□□ 1.91
CPSF7-204ENST00000413232 FYB1O15117 783 aa26.96■■□□□ 1.91
CPSF7-204ENST00000413232 GGNBP2Q9H3C7 697 aa26.95■■□□□ 1.9
CPSF7-204ENST00000413232 RRS1Q15050 365 aaKnown RBP26.93■■□□□ 1.9
CPSF7-204ENST00000413232 SHANK3Q9BYB0 1731 aa26.93■■□□□ 1.9
CPSF7-204ENST00000413232 AMPHP49418 695 aa26.92■■□□□ 1.9
CPSF7-204ENST00000413232 KIF20BQ96Q89 1820 aa26.91■■□□□ 1.9
CPSF7-204ENST00000413232 MYOM1P52179 1685 aa26.91■■□□□ 1.9
CPSF7-204ENST00000413232 SLC15A2Q16348 729 aa26.9■■□□□ 1.9
CPSF7-204ENST00000413232 DDX54Q8TDD1 881 aaKnown RBP26.9■■□□□ 1.9
CPSF7-204ENST00000413232 ZBTB7AO95365 584 aa26.89■■□□□ 1.9
CPSF7-204ENST00000413232 PAPPAQ13219 1627 aa26.88■■□□□ 1.89
CPSF7-204ENST00000413232 CARD14Q9BXL6 1004 aa26.88■■□□□ 1.89
CPSF7-204ENST00000413232 STK32BQ9NY57 414 aa26.88■■□□□ 1.89
CPSF7-204ENST00000413232 PPP1R1BQ9UD71 204 aaPredicted RBP26.88■■□□□ 1.89
CPSF7-204ENST00000413232 MEGF6O75095 1541 aa26.86■■□□□ 1.89
CPSF7-204ENST00000413232 NBPF6Q5VWK0 638 aa26.86■■□□□ 1.89
CPSF7-204ENST00000413232 NBPF4Q96M43 638 aa26.86■■□□□ 1.89
CPSF7-204ENST00000413232 LRRC4BQ9NT99 713 aa26.86■■□□□ 1.89
CPSF7-204ENST00000413232 PTGER2P43116 358 aa26.85■■□□□ 1.89
CPSF7-204ENST00000413232 PCGF6Q9BYE7 350 aa26.85■■□□□ 1.89
CPSF7-204ENST00000413232 ATF5Q9Y2D1 282 aaPredicted RBP26.85■■□□□ 1.89
CPSF7-204ENST00000413232 DOT1LQ8TEK3 1739 aa26.85■■□□□ 1.89
CPSF7-204ENST00000413232 RTL1A6NKG5 1358 aa26.84■■□□□ 1.89
CPSF7-204ENST00000413232 USHBP1Q8N6Y0 703 aa26.83■■□□□ 1.89
CPSF7-204ENST00000413232 CDCA8Q53HL2 280 aa26.82■■□□□ 1.88
CPSF7-204ENST00000413232 TIMELESSQ9UNS1 1208 aa26.82■■□□□ 1.88
CPSF7-204ENST00000413232 ZNF827Q17R98 1081 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms