RNA–Protein interactions for RNA: ENST00000412947.5

ZNF3-204, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best)

Gene ZNF3, Length 595 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-204ENST00000412947 LMO7Q8WWI1 1683 aa17.21■□□□□ 0.35
ZNF3-204ENST00000412947 RTL1A6NKG5 1358 aa17.21■□□□□ 0.35
ZNF3-204ENST00000412947 RGS17Q9UGC6 210 aaPredicted RBP17.21■□□□□ 0.35
ZNF3-204ENST00000412947 CAMTA1Q9Y6Y1 1673 aa17.2■□□□□ 0.34
ZNF3-204ENST00000412947 IP6K1Q92551 441 aa17.2■□□□□ 0.34
ZNF3-204ENST00000412947 QTRT2Q9H974 415 aaKnown RBP17.2■□□□□ 0.34
ZNF3-204ENST00000412947 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.19■□□□□ 0.34
ZNF3-204ENST00000412947 KIF24Q5T7B8 1368 aa17.19■□□□□ 0.34
ZNF3-204ENST00000412947 PPM1GO15355 546 aaPredicted RBP17.19■□□□□ 0.34
ZNF3-204ENST00000412947 HOXC9P31274 260 aa17.19■□□□□ 0.34
ZNF3-204ENST00000412947 AXIN2Q9Y2T1 843 aa17.19■□□□□ 0.34
ZNF3-204ENST00000412947 CCDC9Q9Y3X0 531 aaKnown RBP17.19■□□□□ 0.34
ZNF3-204ENST00000412947 COL18A1P39060 1754 aa17.19■□□□□ 0.34
ZNF3-204ENST00000412947 ATRNO75882 1429 aa17.19■□□□□ 0.34
ZNF3-204ENST00000412947 BLMP54132 1417 aaPredicted RBP17.19■□□□□ 0.34
ZNF3-204ENST00000412947 NRAPQ86VF7 1730 aa17.18■□□□□ 0.34
ZNF3-204ENST00000412947 COL5A2P05997 1499 aaPredicted RBP17.18■□□□□ 0.34
ZNF3-204ENST00000412947 FLT4P35916 1363 aa17.18■□□□□ 0.34
ZNF3-204ENST00000412947 CSB-PGBD3P0DP91 1061 aa17.18■□□□□ 0.34
ZNF3-204ENST00000412947 VPS72Q15906 364 aa17.18■□□□□ 0.34
ZNF3-204ENST00000412947 POLKQ9UBT6 870 aa17.18■□□□□ 0.34
ZNF3-204ENST00000412947 EMILIN1Q9Y6C2 1016 aa17.18■□□□□ 0.34
ZNF3-204ENST00000412947 LARP1Q6PKG0 1096 aaKnown RBP17.16■□□□□ 0.34
ZNF3-204ENST00000412947 POTEAQ6S8J7 498 aa17.16■□□□□ 0.34
ZNF3-204ENST00000412947 ANKRD24Q8TF21 1146 aa17.15■□□□□ 0.34
ZNF3-204ENST00000412947 LTV1Q96GA3 475 aaPredicted RBP17.15■□□□□ 0.34
ZNF3-204ENST00000412947 WDR17Q8IZU2 1322 aa17.15■□□□□ 0.34
ZNF3-204ENST00000412947 INSRP06213 1382 aa17.15■□□□□ 0.34
ZNF3-204ENST00000412947 SMG6Q86US8 1419 aaKnown RBP17.14■□□□□ 0.33
ZNF3-204ENST00000412947 PEAK1Q9H792 1746 aa17.14■□□□□ 0.33
ZNF3-204ENST00000412947 RXRBP28702 533 aa17.14■□□□□ 0.33
ZNF3-204ENST00000412947 RBM6P78332 1123 aaKnown RBP17.14■□□□□ 0.33
ZNF3-204ENST00000412947 TOM1L2Q6ZVM7 507 aa17.14■□□□□ 0.33
ZNF3-204ENST00000412947 GJD4Q96KN9 370 aaPredicted RBP17.14■□□□□ 0.33
ZNF3-204ENST00000412947 ERBB3P21860 1342 aa17.14■□□□□ 0.33
ZNF3-204ENST00000412947 MAP2P11137 1827 aaKnown RBP17.13■□□□□ 0.33
ZNF3-204ENST00000412947 RALBP1Q15311 655 aa17.13■□□□□ 0.33
ZNF3-204ENST00000412947 HSP90AB2PQ58FF8 381 aa17.13■□□□□ 0.33
ZNF3-204ENST00000412947 SPATA31A5Q5VU36 1347 aa17.13■□□□□ 0.33
ZNF3-204ENST00000412947 SPATA31A7Q8IWB4 1347 aa17.13■□□□□ 0.33
ZNF3-204ENST00000412947 PARD3Q8TEW0 1356 aa17.13■□□□□ 0.33
ZNF3-204ENST00000412947 CRB1P82279 1406 aa17.13■□□□□ 0.33
ZNF3-204ENST00000412947 RGPD5Q99666 1765 aa17.12■□□□□ 0.33
ZNF3-204ENST00000412947 MTHFSP49914 203 aa17.12■□□□□ 0.33
ZNF3-204ENST00000412947 USP35Q9P2H5 1018 aa17.12■□□□□ 0.33
ZNF3-204ENST00000412947 CDK12Q9NYV4 1490 aaPredicted RBP17.12■□□□□ 0.33
ZNF3-204ENST00000412947 NLRP2Q9NX02 1062 aa17.11■□□□□ 0.33
ZNF3-204ENST00000412947 SPATA31A1Q5TZJ5 1347 aa17.11■□□□□ 0.33
ZNF3-204ENST00000412947 PPP2R1AP30153 589 aa17.1■□□□□ 0.33
ZNF3-204ENST00000412947 TCP11L2Q8N4U5 519 aa17.1■□□□□ 0.33
ZNF3-204ENST00000412947 CARD10Q9BWT7 1032 aa17.1■□□□□ 0.33
ZNF3-204ENST00000412947 GLI3P10071 1580 aa17.09■□□□□ 0.33
ZNF3-204ENST00000412947 CFAP53Q96M91 514 aa17.08■□□□□ 0.32
ZNF3-204ENST00000412947 THRAP3Q9Y2W1 955 aaKnown RBP17.08■□□□□ 0.32
ZNF3-204ENST00000412947 FAM208AQ9UK61 1670 aaKnown RBP17.07■□□□□ 0.32
ZNF3-204ENST00000412947 A0A0G2JS52 829 aa17.07■□□□□ 0.32
ZNF3-204ENST00000412947 MYT1Q01538 1121 aa17.07■□□□□ 0.32
ZNF3-204ENST00000412947 FAM98CQ17RN3 349 aaKnown RBP17.07■□□□□ 0.32
ZNF3-204ENST00000412947 EIF4A2Q14240 407 aaKnown RBP17.06■□□□□ 0.32
ZNF3-204ENST00000412947 BARGINQ6ZT62 677 aa17.06■□□□□ 0.32
ZNF3-204ENST00000412947 PRKRIP1Q9H875 184 aaPredicted RBP17.06■□□□□ 0.32
ZNF3-204ENST00000412947 MYBBP1AQ9BQG0 1328 aaKnown RBP17.05■□□□□ 0.32
ZNF3-204ENST00000412947 ANP32CO43423 234 aa17.05■□□□□ 0.32
ZNF3-204ENST00000412947 NBPF6Q5VWK0 638 aa17.05■□□□□ 0.32
ZNF3-204ENST00000412947 NBPF4Q96M43 638 aa17.05■□□□□ 0.32
ZNF3-204ENST00000412947 ONECUT3O60422 494 aaPredicted RBP17.03■□□□□ 0.32
ZNF3-204ENST00000412947 DIAPH1O60610 1272 aaKnown RBP17.03■□□□□ 0.32
ZNF3-204ENST00000412947 SEPT12Q8IYM1 358 aa17.03■□□□□ 0.32
ZNF3-204ENST00000412947 USHBP1Q8N6Y0 703 aa17.03■□□□□ 0.32
ZNF3-204ENST00000412947 CDCA7Q9BWT1 371 aaPredicted RBP17.03■□□□□ 0.32
ZNF3-204ENST00000412947 RGS12O14924 1447 aa17.03■□□□□ 0.32
ZNF3-204ENST00000412947 IL13P35225 146 aa17.02■□□□□ 0.32
ZNF3-204ENST00000412947 EYA1Q99502 592 aa17.02■□□□□ 0.32
ZNF3-204ENST00000412947 IL2RBP14784 551 aa17.01■□□□□ 0.31
ZNF3-204ENST00000412947 COL3A1P02461 1466 aaPredicted RBP17■□□□□ 0.31
ZNF3-204ENST00000412947 THSD7AQ9UPZ6 1657 aa17■□□□□ 0.31
ZNF3-204ENST00000412947 RGPD2P0DJD1 1756 aa17■□□□□ 0.31
ZNF3-204ENST00000412947 IGSF1Q8N6C5 1336 aa16.99■□□□□ 0.31
ZNF3-204ENST00000412947 RAPGEF4Q8WZA2 1011 aa16.99■□□□□ 0.31
ZNF3-204ENST00000412947 NUDCQ9Y266 331 aa16.99■□□□□ 0.31
ZNF3-204ENST00000412947 DISP2A7MBM2 1401 aa16.98■□□□□ 0.31
ZNF3-204ENST00000412947 U2SURPO15042 1029 aaKnown RBP16.98■□□□□ 0.31
ZNF3-204ENST00000412947 NCAPD2Q15021 1401 aa16.97■□□□□ 0.31
ZNF3-204ENST00000412947 TATP17735 454 aaPredicted RBP16.97■□□□□ 0.31
ZNF3-204ENST00000412947 DDB1Q16531 1140 aa16.97■□□□□ 0.31
ZNF3-204ENST00000412947 WNK3Q9BYP7 1800 aa16.97■□□□□ 0.31
ZNF3-204ENST00000412947 EXOC5O00471 708 aa16.96■□□□□ 0.31
ZNF3-204ENST00000412947 PDE3BQ13370 1112 aa16.96■□□□□ 0.31
ZNF3-204ENST00000412947 SULT6B1Q6IMI4 303 aa16.96■□□□□ 0.31
ZNF3-204ENST00000412947 ILDR2Q71H61 639 aa16.96■□□□□ 0.31
ZNF3-204ENST00000412947 KRT27Q7Z3Y8 459 aa16.96■□□□□ 0.31
ZNF3-204ENST00000412947 PARP4Q9UKK3 1724 aaKnown RBP16.96■□□□□ 0.3
ZNF3-204ENST00000412947 MEGF6O75095 1541 aa16.95■□□□□ 0.3
ZNF3-204ENST00000412947 RGPD1P0DJD0 1748 aa16.94■□□□□ 0.3
ZNF3-204ENST00000412947 LRRC37A3O60309 1634 aa16.94■□□□□ 0.3
ZNF3-204ENST00000412947 TNS2Q63HR2 1409 aa16.94■□□□□ 0.3
ZNF3-204ENST00000412947 HMOX1P09601 288 aa16.93■□□□□ 0.3
ZNF3-204ENST00000412947 U2AF1L5P0DN76 240 aaPredicted RBP16.93■□□□□ 0.3
ZNF3-204ENST00000412947 U2AF1Q01081 240 aaKnown RBP eCLIP16.93■□□□□ 0.3
ZNF3-204ENST00000412947 DIEXFQ68CQ4 756 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms