RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 CRB1P82279 1406 aa24.41■■□□□ 1.5
HSPG2-204ENST00000412328 FAM98CQ17RN3 349 aaKnown RBP24.4■■□□□ 1.5
HSPG2-204ENST00000412328 CCDC9Q9Y3X0 531 aaKnown RBP24.4■■□□□ 1.5
HSPG2-204ENST00000412328 SBF2Q86WG5 1849 aa24.4■■□□□ 1.5
HSPG2-204ENST00000412328 RGPD2P0DJD1 1756 aa24.39■■□□□ 1.5
HSPG2-204ENST00000412328 LARP1Q6PKG0 1096 aaKnown RBP24.39■■□□□ 1.49
HSPG2-204ENST00000412328 KCNH5Q8NCM2 988 aa24.39■■□□□ 1.49
HSPG2-204ENST00000412328 STRN4Q9NRL3 753 aa24.39■■□□□ 1.49
HSPG2-204ENST00000412328 AXIN2Q9Y2T1 843 aa24.38■■□□□ 1.49
HSPG2-204ENST00000412328 HSPA5P11021 654 aaKnown RBP24.34■■□□□ 1.49
HSPG2-204ENST00000412328 BARGINQ6ZT62 677 aa24.34■■□□□ 1.49
HSPG2-204ENST00000412328 DISP2A7MBM2 1401 aa24.34■■□□□ 1.49
HSPG2-204ENST00000412328 BLMP54132 1417 aaPredicted RBP24.34■■□□□ 1.49
HSPG2-204ENST00000412328 CDCA8Q53HL2 280 aa24.33■■□□□ 1.49
HSPG2-204ENST00000412328 WDR17Q8IZU2 1322 aa24.33■■□□□ 1.48
HSPG2-204ENST00000412328 SOX12O15370 315 aa24.32■■□□□ 1.48
HSPG2-204ENST00000412328 KRT27Q7Z3Y8 459 aa24.32■■□□□ 1.48
HSPG2-204ENST00000412328 EIF4G2P78344 907 aaKnown RBP eCLIP24.31■■□□□ 1.48
HSPG2-204ENST00000412328 SHANK3Q9BYB0 1731 aa24.31■■□□□ 1.48
HSPG2-204ENST00000412328 NSD3Q9BZ95 1437 aa24.31■■□□□ 1.48
HSPG2-204ENST00000412328 MAP2P11137 1827 aaKnown RBP24.29■■□□□ 1.48
HSPG2-204ENST00000412328 ZBTB7CA1YPR0 619 aa24.29■■□□□ 1.48
HSPG2-204ENST00000412328 CARD14Q9BXL6 1004 aa24.29■■□□□ 1.48
HSPG2-204ENST00000412328 RREB1Q92766 1687 aa24.28■■□□□ 1.48
HSPG2-204ENST00000412328 EVA1CP58658 441 aa24.28■■□□□ 1.48
HSPG2-204ENST00000412328 TCP11L2Q8N4U5 519 aa24.28■■□□□ 1.48
HSPG2-204ENST00000412328 THRAP3Q9Y2W1 955 aaKnown RBP24.28■■□□□ 1.48
HSPG2-204ENST00000412328 ERBB3P21860 1342 aa24.28■■□□□ 1.48
HSPG2-204ENST00000412328 USP35Q9P2H5 1018 aa24.27■■□□□ 1.48
HSPG2-204ENST00000412328 RGPD3A6NKT7 1758 aaPredicted RBP24.26■■□□□ 1.47
HSPG2-204ENST00000412328 RGPD4Q7Z3J3 1758 aa24.26■■□□□ 1.47
HSPG2-204ENST00000412328 FYB1O15117 783 aa24.26■■□□□ 1.47
HSPG2-204ENST00000412328 A0A0G2JS52 829 aa24.24■■□□□ 1.47
HSPG2-204ENST00000412328 MYT1Q01538 1121 aa24.24■■□□□ 1.47
HSPG2-204ENST00000412328 C11orf95C9JLR9 678 aaPredicted RBP24.23■■□□□ 1.47
HSPG2-204ENST00000412328 CCDC125Q86Z20 511 aa24.23■■□□□ 1.47
HSPG2-204ENST00000412328 RTL1A6NKG5 1358 aa24.23■■□□□ 1.47
HSPG2-204ENST00000412328 MAP3K19Q56UN5 1328 aa24.22■■□□□ 1.47
HSPG2-204ENST00000412328 FAM182BQ5T319 152 aa24.22■■□□□ 1.47
HSPG2-204ENST00000412328 COG3Q96JB2 828 aa24.22■■□□□ 1.47
HSPG2-204ENST00000412328 NUP188Q5SRE5 1749 aa24.21■■□□□ 1.47
HSPG2-204ENST00000412328 GGNBP2Q9H3C7 697 aa24.21■■□□□ 1.47
HSPG2-204ENST00000412328 TNS2Q63HR2 1409 aa24.2■■□□□ 1.46
HSPG2-204ENST00000412328 CCDC7Q96M83 1385 aa24.2■■□□□ 1.46
HSPG2-204ENST00000412328 TOM1L2Q6ZVM7 507 aa24.2■■□□□ 1.46
HSPG2-204ENST00000412328 CARD10Q9BWT7 1032 aa24.2■■□□□ 1.46
HSPG2-204ENST00000412328 NHSQ6T4R5 1651 aa24.19■■□□□ 1.46
HSPG2-204ENST00000412328 FBLN1P23142 703 aa24.19■■□□□ 1.46
HSPG2-204ENST00000412328 IP6K1Q92551 441 aa24.17■■□□□ 1.46
HSPG2-204ENST00000412328 OVOS2A0A0G2JMS6 1433 aa24.17■■□□□ 1.46
HSPG2-204ENST00000412328 BCL9O00512 1426 aa24.16■■□□□ 1.46
HSPG2-204ENST00000412328 HOXC9P31274 260 aa24.15■■□□□ 1.46
HSPG2-204ENST00000412328 ANKRD24Q8TF21 1146 aa24.15■■□□□ 1.46
HSPG2-204ENST00000412328 DEFB132Q7Z7B7 95 aa24.14■■□□□ 1.45
HSPG2-204ENST00000412328 KIF7Q2M1P5 1343 aa24.13■■□□□ 1.45
HSPG2-204ENST00000412328 PKD1L3Q7Z443 1732 aa24.13■■□□□ 1.45
HSPG2-204ENST00000412328 KIF24Q5T7B8 1368 aa24.13■■□□□ 1.45
HSPG2-204ENST00000412328 NCAPD2Q15021 1401 aa24.11■■□□□ 1.45
HSPG2-204ENST00000412328 SMG6Q86US8 1419 aaKnown RBP24.11■■□□□ 1.45
HSPG2-204ENST00000412328 DOT1LQ8TEK3 1739 aa24.11■■□□□ 1.45
HSPG2-204ENST00000412328 CSB-PGBD3P0DP91 1061 aa24.11■■□□□ 1.45
HSPG2-204ENST00000412328 RRS1Q15050 365 aaKnown RBP24.11■■□□□ 1.45
HSPG2-204ENST00000412328 MEGF6O75095 1541 aa24.1■■□□□ 1.45
HSPG2-204ENST00000412328 FAM196AQ6ZSG2 479 aa24.1■■□□□ 1.45
HSPG2-204ENST00000412328 CDCA7Q9BWT1 371 aaPredicted RBP24.1■■□□□ 1.45
HSPG2-204ENST00000412328 FLT4P35916 1363 aa24.1■■□□□ 1.45
HSPG2-204ENST00000412328 BTAF1O14981 1849 aa24.1■■□□□ 1.45
HSPG2-204ENST00000412328 CGNL1Q0VF96 1302 aa24.1■■□□□ 1.45
HSPG2-204ENST00000412328 INSRP06213 1382 aa24.08■■□□□ 1.45
HSPG2-204ENST00000412328 PDE3BQ13370 1112 aa24.08■■□□□ 1.45
HSPG2-204ENST00000412328 DDB1Q16531 1140 aa24.08■■□□□ 1.45
HSPG2-204ENST00000412328 NSD2O96028 1365 aa24.07■■□□□ 1.44
HSPG2-204ENST00000412328 MARCH10Q8NA82 808 aaPredicted RBP24.07■■□□□ 1.44
HSPG2-204ENST00000412328 POLR3GLQ9BT43 218 aa24.07■■□□□ 1.44
HSPG2-204ENST00000412328 PANK3Q9H999 370 aa24.06■■□□□ 1.44
HSPG2-204ENST00000412328 NLRP2Q9NX02 1062 aa24.06■■□□□ 1.44
HSPG2-204ENST00000412328 TRIM37O94972 964 aa24.04■■□□□ 1.44
HSPG2-204ENST00000412328 AMPHP49418 695 aa24.04■■□□□ 1.44
HSPG2-204ENST00000412328 EMILIN1Q9Y6C2 1016 aa24.04■■□□□ 1.44
HSPG2-204ENST00000412328 TOGARAM1Q9Y4F4 1720 aa24.04■■□□□ 1.44
HSPG2-204ENST00000412328 SF3B2Q13435 895 aaKnown RBP24.03■■□□□ 1.44
HSPG2-204ENST00000412328 IL2RBP14784 551 aa24.02■■□□□ 1.44
HSPG2-204ENST00000412328 BAG6P46379 1132 aa24.02■■□□□ 1.44
HSPG2-204ENST00000412328 HSP90AB2PQ58FF8 381 aa24.01■■□□□ 1.43
HSPG2-204ENST00000412328 LTV1Q96GA3 475 aaPredicted RBP24.01■■□□□ 1.43
HSPG2-204ENST00000412328 PARD3Q8TEW0 1356 aa24.01■■□□□ 1.43
HSPG2-204ENST00000412328 LRP5O75197 1615 aa24■■□□□ 1.43
HSPG2-204ENST00000412328 WASHC2AQ641Q2 1341 aa24■■□□□ 1.43
HSPG2-204ENST00000412328 EN1Q05925 392 aaPredicted RBP23.99■■□□□ 1.43
HSPG2-204ENST00000412328 CAMKK2Q96RR4 588 aa23.99■■□□□ 1.43
HSPG2-204ENST00000412328 PAPPAQ13219 1627 aa23.99■■□□□ 1.43
HSPG2-204ENST00000412328 NBPF6Q5VWK0 638 aa23.98■■□□□ 1.43
HSPG2-204ENST00000412328 PTF1AQ7RTS3 328 aa23.98■■□□□ 1.43
HSPG2-204ENST00000412328 NBPF4Q96M43 638 aa23.98■■□□□ 1.43
HSPG2-204ENST00000412328 LY75O60449 1722 aa23.98■■□□□ 1.43
HSPG2-204ENST00000412328 ITGB4P16144 1822 aa23.98■■□□□ 1.43
HSPG2-204ENST00000412328 POLKQ9UBT6 870 aa23.97■■□□□ 1.43
HSPG2-204ENST00000412328 KAT6BQ8WYB5 2073 aa23.96■■□□□ 1.43
HSPG2-204ENST00000412328 AMER1Q5JTC6 1135 aaPredicted RBP23.96■■□□□ 1.43
HSPG2-204ENST00000412328 EXOC5O00471 708 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms