RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 KCTD15Q96SI1 283 aaPredicted RBP10.56□□□□□ -0.72
HDAC9-205ENST00000411993 ZFAND3Q9H8U3 227 aa10.56□□□□□ -0.72
HDAC9-205ENST00000411993 TRIM46Q7Z4K8 759 aa10.55□□□□□ -0.72
HDAC9-205ENST00000411993 KLF16Q9BXK1 252 aaPredicted RBP10.55□□□□□ -0.72
HDAC9-205ENST00000411993 SNRKQ9NRH2 765 aa10.55□□□□□ -0.72
HDAC9-205ENST00000411993 SOCS7O14512 581 aa10.54□□□□□ -0.72
HDAC9-205ENST00000411993 NBPF20Q3BBV1 942 aa10.54□□□□□ -0.72
HDAC9-205ENST00000411993 EMILIN1Q9Y6C2 1016 aa10.54□□□□□ -0.72
HDAC9-205ENST00000411993 NDUFB9Q9Y6M9 179 aa10.54□□□□□ -0.72
HDAC9-205ENST00000411993 ZBBXA8MT70 800 aa10.53□□□□□ -0.72
HDAC9-205ENST00000411993 SNRPBP14678 240 aaKnown RBP10.53□□□□□ -0.72
HDAC9-205ENST00000411993 SCARF1Q14162 830 aa10.53□□□□□ -0.72
HDAC9-205ENST00000411993 MRPL14Q6P1L8 145 aaKnown RBP10.53□□□□□ -0.72
HDAC9-205ENST00000411993 ZNF775Q96BV0 537 aaPredicted RBP10.53□□□□□ -0.72
HDAC9-205ENST00000411993 PGPEP1Q9NXJ5 209 aa10.52□□□□□ -0.73
HDAC9-205ENST00000411993 DHX9Q08211 1270 aaKnown RBP10.51□□□□□ -0.73
HDAC9-205ENST00000411993 PPP1R26Q5T8A7 1209 aaPredicted RBP10.51□□□□□ -0.73
HDAC9-205ENST00000411993 UPP2O95045 317 aa10.5□□□□□ -0.73
HDAC9-205ENST00000411993 FBXO45P0C2W1 286 aa10.5□□□□□ -0.73
HDAC9-205ENST00000411993 RAB15P59190 212 aa10.5□□□□□ -0.73
HDAC9-205ENST00000411993 INTS6LQ5JSJ4 861 aaKnown RBP10.5□□□□□ -0.73
HDAC9-205ENST00000411993 ZFP42Q96MM3 310 aa10.5□□□□□ -0.73
HDAC9-205ENST00000411993 PURBQ96QR8 312 aaKnown RBP10.5□□□□□ -0.73
HDAC9-205ENST00000411993 PCDHB9Q9Y5E1 797 aa10.5□□□□□ -0.73
HDAC9-205ENST00000411993 MEIOBQ8N635 442 aa10.49□□□□□ -0.73
HDAC9-205ENST00000411993 PRM3Q9NNZ6 103 aa10.49□□□□□ -0.73
HDAC9-205ENST00000411993 C6orf118Q5T5N4 469 aa10.48□□□□□ -0.73
HDAC9-205ENST00000411993 NR1H3Q13133 447 aa10.47□□□□□ -0.73
HDAC9-205ENST00000411993 ZNF330Q9Y3S2 320 aaPredicted RBP10.47□□□□□ -0.73
HDAC9-205ENST00000411993 BMP2P12643 396 aa10.46□□□□□ -0.73
HDAC9-205ENST00000411993 LINC00528Q8N1L1 170 aa10.46□□□□□ -0.73
HDAC9-205ENST00000411993 ZNF592Q92610 1267 aa10.44□□□□□ -0.74
HDAC9-205ENST00000411993 TSEN34Q9BSV6 310 aaKnown RBP10.44□□□□□ -0.74
HDAC9-205ENST00000411993 TBC1D2BQ9UPU7 963 aa10.44□□□□□ -0.74
HDAC9-205ENST00000411993 GPR37L1O60883 481 aa10.43□□□□□ -0.74
HDAC9-205ENST00000411993 CBLBQ13191 982 aa10.43□□□□□ -0.74
HDAC9-205ENST00000411993 ESPNB1AK53 854 aa10.42□□□□□ -0.74
HDAC9-205ENST00000411993 SEPT12Q8IYM1 358 aa10.42□□□□□ -0.74
HDAC9-205ENST00000411993 TMPRSS4Q9NRS4 437 aa10.42□□□□□ -0.74
HDAC9-205ENST00000411993 ERVH48-1M5A8F1 160 aa10.41□□□□□ -0.74
HDAC9-205ENST00000411993 MCCD1P59942 119 aaPredicted RBP10.41□□□□□ -0.74
HDAC9-205ENST00000411993 Q6ZVU0 165 aa10.4□□□□□ -0.74
HDAC9-205ENST00000411993 ZNF784Q8NCA9 323 aaPredicted RBP10.4□□□□□ -0.74
HDAC9-205ENST00000411993 TRIM52Q96A61 297 aa10.4□□□□□ -0.74
HDAC9-205ENST00000411993 MAN1A2O60476 641 aa10.39□□□□□ -0.75
HDAC9-205ENST00000411993 GIGYF1O75420 1035 aaPredicted RBP10.39□□□□□ -0.75
HDAC9-205ENST00000411993 MCM6Q14566 821 aa10.39□□□□□ -0.75
HDAC9-205ENST00000411993 ABL2P42684 1182 aa10.38□□□□□ -0.75
HDAC9-205ENST00000411993 RNF20Q5VTR2 975 aa10.38□□□□□ -0.75
HDAC9-205ENST00000411993 TREML4Q6UXN2 200 aa10.38□□□□□ -0.75
HDAC9-205ENST00000411993 GDPD2Q9HCC8 539 aa10.38□□□□□ -0.75
HDAC9-205ENST00000411993 SOBPA7XYQ1 873 aa10.37□□□□□ -0.75
HDAC9-205ENST00000411993 WFS1O76024 890 aa10.37□□□□□ -0.75
HDAC9-205ENST00000411993 AGBL1Q96MI9 1066 aa10.37□□□□□ -0.75
HDAC9-205ENST00000411993 TERTO14746 1132 aaKnown RBP10.36□□□□□ -0.75
HDAC9-205ENST00000411993 RELBQ01201 579 aa10.36□□□□□ -0.75
HDAC9-205ENST00000411993 CYLDQ9NQC7 956 aa10.36□□□□□ -0.75
HDAC9-205ENST00000411993 ADH1AP07327 375 aa10.35□□□□□ -0.75
HDAC9-205ENST00000411993 CCDC125Q86Z20 511 aa10.35□□□□□ -0.75
HDAC9-205ENST00000411993 NXF1Q9UBU9 619 aaKnown RBP10.35□□□□□ -0.75
HDAC9-205ENST00000411993 SOS2Q07890 1332 aaPredicted RBP10.34□□□□□ -0.75
HDAC9-205ENST00000411993 TTLL8A6PVC2 850 aa10.34□□□□□ -0.75
HDAC9-205ENST00000411993 SPINT1O43278 529 aa10.34□□□□□ -0.75
HDAC9-205ENST00000411993 EIF4G2P78344 907 aaKnown RBP eCLIP10.34□□□□□ -0.75
HDAC9-205ENST00000411993 IRF5Q13568 498 aa10.34□□□□□ -0.75
HDAC9-205ENST00000411993 LILRA1O75019 489 aa10.33□□□□□ -0.76
HDAC9-205ENST00000411993 NFX1Q12986 1120 aaKnown RBP10.33□□□□□ -0.76
HDAC9-205ENST00000411993 TMEM132AQ24JP5 1023 aa10.33□□□□□ -0.76
HDAC9-205ENST00000411993 SLC16A10Q8TF71 515 aa10.33□□□□□ -0.76
HDAC9-205ENST00000411993 ADD1P35611 737 aaKnown RBP10.32□□□□□ -0.76
HDAC9-205ENST00000411993 ZNF395Q9H8N7 513 aaPredicted RBP10.32□□□□□ -0.76
HDAC9-205ENST00000411993 POLMQ9NP87 494 aaPredicted RBP10.32□□□□□ -0.76
HDAC9-205ENST00000411993 DNMT3LQ9UJW3 386 aa10.32□□□□□ -0.76
HDAC9-205ENST00000411993 PCDHB11Q9Y5F2 797 aa10.32□□□□□ -0.76
HDAC9-205ENST00000411993 VEGFBP49765 207 aa10.31□□□□□ -0.76
HDAC9-205ENST00000411993 VAC14Q08AM6 782 aa10.31□□□□□ -0.76
HDAC9-205ENST00000411993 INSM2Q96T92 566 aaPredicted RBP10.31□□□□□ -0.76
HDAC9-205ENST00000411993 ESF1Q9H501 851 aaKnown RBP10.31□□□□□ -0.76
HDAC9-205ENST00000411993 FIGNL2A6NMB9 653 aa10.3□□□□□ -0.76
HDAC9-205ENST00000411993 WASHC4Q2M389 1173 aa10.3□□□□□ -0.76
HDAC9-205ENST00000411993 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.3□□□□□ -0.76
HDAC9-205ENST00000411993 NPAS3Q8IXF0 933 aa10.3□□□□□ -0.76
HDAC9-205ENST00000411993 PTGIRP43119 386 aa10.29□□□□□ -0.76
HDAC9-205ENST00000411993 FLIIQ13045 1269 aa10.29□□□□□ -0.76
HDAC9-205ENST00000411993 CC2D2BQ6DHV5 1058 aa10.29□□□□□ -0.76
HDAC9-205ENST00000411993 CEP126Q9P2H0 1117 aa10.29□□□□□ -0.76
HDAC9-205ENST00000411993 COG6Q9Y2V7 657 aa10.29□□□□□ -0.76
HDAC9-205ENST00000411993 ATP5J2-PTCD1G3V325 749 aa10.28□□□□□ -0.76
HDAC9-205ENST00000411993 CTSOP43234 321 aaPredicted RBP10.28□□□□□ -0.76
HDAC9-205ENST00000411993 ERVK-9P63128 1117 aa10.28□□□□□ -0.76
HDAC9-205ENST00000411993 LCE2AQ5TA79 106 aaPredicted RBP10.28□□□□□ -0.76
HDAC9-205ENST00000411993 WWC1Q8IX03 1113 aa10.28□□□□□ -0.76
HDAC9-205ENST00000411993 RAD21O60216 631 aa10.27□□□□□ -0.77
HDAC9-205ENST00000411993 H3BM21 787 aa10.26□□□□□ -0.77
HDAC9-205ENST00000411993 UBTFP17480 764 aaKnown RBP10.26□□□□□ -0.77
HDAC9-205ENST00000411993 SLFNL1Q499Z3 407 aa10.26□□□□□ -0.77
HDAC9-205ENST00000411993 SCTRP47872 440 aa10.25□□□□□ -0.77
HDAC9-205ENST00000411993 CYP2U1Q7Z449 544 aa10.25□□□□□ -0.77
HDAC9-205ENST00000411993 IRF7Q92985 503 aa10.25□□□□□ -0.77
HDAC9-205ENST00000411993 MYCP01106 439 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms