RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 CARD11Q9BXL7 1154 aa23.57■■□□□ 1.36
SCAMP4-203ENST00000411971 THRAP3Q9Y2W1 955 aaKnown RBP23.57■■□□□ 1.36
SCAMP4-203ENST00000411971 USP54Q70EL1 1684 aa23.57■■□□□ 1.36
SCAMP4-203ENST00000411971 APBA3O96018 575 aa23.56■■□□□ 1.36
SCAMP4-203ENST00000411971 ZNF692Q9BU19 519 aaPredicted RBP23.56■■□□□ 1.36
SCAMP4-203ENST00000411971 PTF1AQ7RTS3 328 aa23.54■■□□□ 1.36
SCAMP4-203ENST00000411971 TTC21AQ8NDW8 1320 aa23.54■■□□□ 1.36
SCAMP4-203ENST00000411971 WDR17Q8IZU2 1322 aa23.53■■□□□ 1.36
SCAMP4-203ENST00000411971 LTN1O94822 1766 aa23.52■■□□□ 1.36
SCAMP4-203ENST00000411971 TOM1L2Q6ZVM7 507 aa23.52■■□□□ 1.36
SCAMP4-203ENST00000411971 NME9Q86XW9 330 aa23.52■■□□□ 1.36
SCAMP4-203ENST00000411971 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.52■■□□□ 1.36
SCAMP4-203ENST00000411971 SLC12A5Q9H2X9 1139 aa23.52■■□□□ 1.36
SCAMP4-203ENST00000411971 TONSLQ96HA7 1378 aa23.52■■□□□ 1.36
SCAMP4-203ENST00000411971 USP31Q70CQ4 1352 aa23.49■■□□□ 1.35
SCAMP4-203ENST00000411971 MARCH10Q8NA82 808 aaPredicted RBP23.48■■□□□ 1.35
SCAMP4-203ENST00000411971 KCNH5Q8NCM2 988 aa23.48■■□□□ 1.35
SCAMP4-203ENST00000411971 TESK2Q96S53 571 aa23.47■■□□□ 1.35
SCAMP4-203ENST00000411971 OVOS2A0A0G2JMS6 1433 aa23.47■■□□□ 1.35
SCAMP4-203ENST00000411971 OVOS2A0A0J9YW53 1432 aa23.47■■□□□ 1.35
SCAMP4-203ENST00000411971 OVOS2Q6IE36 1432 aa23.47■■□□□ 1.35
SCAMP4-203ENST00000411971 A0A1W2PP64 1363 aa23.46■■□□□ 1.35
SCAMP4-203ENST00000411971 DDB1Q16531 1140 aa23.46■■□□□ 1.35
SCAMP4-203ENST00000411971 TMC1Q8TDI8 760 aa23.46■■□□□ 1.35
SCAMP4-203ENST00000411971 PARD3Q8TEW0 1356 aa23.45■■□□□ 1.34
SCAMP4-203ENST00000411971 CARD10Q9BWT7 1032 aa23.44■■□□□ 1.34
SCAMP4-203ENST00000411971 ABCC6O95255 1503 aa23.43■■□□□ 1.34
SCAMP4-203ENST00000411971 RGPD3A6NKT7 1758 aaPredicted RBP23.43■■□□□ 1.34
SCAMP4-203ENST00000411971 RGPD4Q7Z3J3 1758 aa23.43■■□□□ 1.34
SCAMP4-203ENST00000411971 ST20-MTHFSA0A0A6YYL1 179 aa23.42■■□□□ 1.34
SCAMP4-203ENST00000411971 EDC4Q6P2E9 1401 aaKnown RBP23.42■■□□□ 1.34
SCAMP4-203ENST00000411971 CSB-PGBD3P0DP91 1061 aa23.41■■□□□ 1.34
SCAMP4-203ENST00000411971 ERBB3P21860 1342 aa23.38■■□□□ 1.33
SCAMP4-203ENST00000411971 PROM2Q8N271 834 aa23.38■■□□□ 1.33
SCAMP4-203ENST00000411971 BCL9O00512 1426 aa23.37■■□□□ 1.33
SCAMP4-203ENST00000411971 FBLN1P23142 703 aa23.37■■□□□ 1.33
SCAMP4-203ENST00000411971 TRIM26Q12899 539 aaPredicted RBP23.37■■□□□ 1.33
SCAMP4-203ENST00000411971 HDGFL2Q7Z4V5 671 aaPredicted RBP23.37■■□□□ 1.33
SCAMP4-203ENST00000411971 ANO8Q9HCE9 1232 aaPredicted RBP23.37■■□□□ 1.33
SCAMP4-203ENST00000411971 RGPD2P0DJD1 1756 aa23.37■■□□□ 1.33
SCAMP4-203ENST00000411971 CCDC7Q96M83 1385 aa23.36■■□□□ 1.33
SCAMP4-203ENST00000411971 TNS2Q63HR2 1409 aa23.35■■□□□ 1.33
SCAMP4-203ENST00000411971 PUS7Q96PZ0 661 aaKnown RBP23.35■■□□□ 1.33
SCAMP4-203ENST00000411971 BCL11BQ9C0K0 894 aaPredicted RBP23.35■■□□□ 1.33
SCAMP4-203ENST00000411971 PLSCR1O15162 318 aa23.34■■□□□ 1.33
SCAMP4-203ENST00000411971 CDCA7Q9BWT1 371 aaPredicted RBP23.34■■□□□ 1.33
SCAMP4-203ENST00000411971 CASZ1Q86V15 1759 aa23.34■■□□□ 1.33
SCAMP4-203ENST00000411971 NHSQ6T4R5 1651 aa23.33■■□□□ 1.33
SCAMP4-203ENST00000411971 KCNQ2O43526 872 aa23.33■■□□□ 1.33
SCAMP4-203ENST00000411971 ANKRD24Q8TF21 1146 aa23.33■■□□□ 1.33
SCAMP4-203ENST00000411971 TERF2IPQ9NYB0 399 aa23.33■■□□□ 1.33
SCAMP4-203ENST00000411971 C11orf95C9JLR9 678 aaPredicted RBP23.32■■□□□ 1.32
SCAMP4-203ENST00000411971 EXOC5O00471 708 aa23.32■■□□□ 1.32
SCAMP4-203ENST00000411971 PDGFDQ9GZP0 370 aaPredicted RBP23.32■■□□□ 1.32
SCAMP4-203ENST00000411971 NLRP2Q9NX02 1062 aa23.32■■□□□ 1.32
SCAMP4-203ENST00000411971 NBPF14Q5TI25 921 aa23.3■■□□□ 1.32
SCAMP4-203ENST00000411971 FAM208AQ9UK61 1670 aaKnown RBP23.29■■□□□ 1.32
SCAMP4-203ENST00000411971 KAT6BQ8WYB5 2073 aa23.29■■□□□ 1.32
SCAMP4-203ENST00000411971 BTAF1O14981 1849 aa23.29■■□□□ 1.32
SCAMP4-203ENST00000411971 ACSBG1Q96GR2 724 aa23.28■■□□□ 1.32
SCAMP4-203ENST00000411971 USP47Q96K76 1375 aa23.27■■□□□ 1.32
SCAMP4-203ENST00000411971 SHANK3Q9BYB0 1731 aa23.27■■□□□ 1.32
SCAMP4-203ENST00000411971 IL2RBP14784 551 aa23.26■■□□□ 1.31
SCAMP4-203ENST00000411971 IP6K1Q92551 441 aa23.26■■□□□ 1.31
SCAMP4-203ENST00000411971 MAP3K19Q56UN5 1328 aa23.26■■□□□ 1.31
SCAMP4-203ENST00000411971 NINLQ9Y2I6 1382 aa23.26■■□□□ 1.31
SCAMP4-203ENST00000411971 MYOM1P52179 1685 aa23.25■■□□□ 1.31
SCAMP4-203ENST00000411971 LTV1Q96GA3 475 aaPredicted RBP23.25■■□□□ 1.31
SCAMP4-203ENST00000411971 ANKRD36BQ8N2N9 1353 aa23.25■■□□□ 1.31
SCAMP4-203ENST00000411971 TXNRD1Q16881 649 aa23.24■■□□□ 1.31
SCAMP4-203ENST00000411971 PAPPAQ13219 1627 aa23.22■■□□□ 1.31
SCAMP4-203ENST00000411971 KIF20BQ96Q89 1820 aa23.22■■□□□ 1.31
SCAMP4-203ENST00000411971 FYB1O15117 783 aa23.21■■□□□ 1.31
SCAMP4-203ENST00000411971 HOXC9P31274 260 aa23.21■■□□□ 1.31
SCAMP4-203ENST00000411971 GGNBP2Q9H3C7 697 aa23.21■■□□□ 1.31
SCAMP4-203ENST00000411971 COG3Q96JB2 828 aa23.2■■□□□ 1.3
SCAMP4-203ENST00000411971 RRS1Q15050 365 aaKnown RBP23.19■■□□□ 1.3
SCAMP4-203ENST00000411971 SPON1Q9HCB6 807 aa23.19■■□□□ 1.3
SCAMP4-203ENST00000411971 MEGF6O75095 1541 aa23.18■■□□□ 1.3
SCAMP4-203ENST00000411971 DOT1LQ8TEK3 1739 aa23.17■■□□□ 1.3
SCAMP4-203ENST00000411971 ZBTB7AO95365 584 aa23.16■■□□□ 1.3
SCAMP4-203ENST00000411971 TMF1P82094 1093 aa23.16■■□□□ 1.3
SCAMP4-203ENST00000411971 SLC15A2Q16348 729 aa23.15■■□□□ 1.3
SCAMP4-203ENST00000411971 CARD14Q9BXL6 1004 aa23.15■■□□□ 1.3
SCAMP4-203ENST00000411971 LRRC4BQ9NT99 713 aa23.15■■□□□ 1.3
SCAMP4-203ENST00000411971 PTGER2P43116 358 aa23.14■■□□□ 1.29
SCAMP4-203ENST00000411971 AMPHP49418 695 aa23.14■■□□□ 1.29
SCAMP4-203ENST00000411971 DDX54Q8TDD1 881 aaKnown RBP23.14■■□□□ 1.29
SCAMP4-203ENST00000411971 NBPF6Q5VWK0 638 aa23.13■■□□□ 1.29
SCAMP4-203ENST00000411971 USHBP1Q8N6Y0 703 aa23.13■■□□□ 1.29
SCAMP4-203ENST00000411971 NBPF4Q96M43 638 aa23.13■■□□□ 1.29
SCAMP4-203ENST00000411971 TUBGCP6Q96RT7 1819 aa23.12■■□□□ 1.29
SCAMP4-203ENST00000411971 ZNF827Q17R98 1081 aa23.12■■□□□ 1.29
SCAMP4-203ENST00000411971 ATF5Q9Y2D1 282 aaPredicted RBP23.12■■□□□ 1.29
SCAMP4-203ENST00000411971 SLC24A1O60721 1099 aa23.11■■□□□ 1.29
SCAMP4-203ENST00000411971 STK32BQ9NY57 414 aa23.11■■□□□ 1.29
SCAMP4-203ENST00000411971 NSD2O96028 1365 aa23.11■■□□□ 1.29
SCAMP4-203ENST00000411971 RTL1A6NKG5 1358 aa23.1■■□□□ 1.29
SCAMP4-203ENST00000411971 LY75O60449 1722 aa23.09■■□□□ 1.29
SCAMP4-203ENST00000411971 KCNQ4P56696 695 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms