RNA–Protein interactions for RNA: ENST00000411956.1

AP001056.1-201, humanhuman

TSL 3 BASIC

Gene AP001056.1, Length 821 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001056.1-201ENST00000411956 COL3A1P02461 1466 aaPredicted RBP21.3■■□□□ 1
AP001056.1-201ENST00000411956 PPM1GO15355 546 aaPredicted RBP21.29■■□□□ 1
AP001056.1-201ENST00000411956 HOXC9P31274 260 aa21.29■■□□□ 1
AP001056.1-201ENST00000411956 AMPHP49418 695 aa21.29■■□□□ 1
AP001056.1-201ENST00000411956 CHRNA2Q15822 529 aa21.29■■□□□ 1
AP001056.1-201ENST00000411956 BLMP54132 1417 aaPredicted RBP21.29■■□□□ 1
AP001056.1-201ENST00000411956 RGPD5Q99666 1765 aa21.28■■□□□ 1
AP001056.1-201ENST00000411956 NRAPQ86VF7 1730 aa21.27■■□□□ 1
AP001056.1-201ENST00000411956 ILDR2Q71H61 639 aa21.27■■□□□ 1
AP001056.1-201ENST00000411956 MIER1Q8N108 512 aa21.27■■□□□ 1
AP001056.1-201ENST00000411956 IP6K1Q92551 441 aa21.27■■□□□ 1
AP001056.1-201ENST00000411956 CAMTA1Q9Y6Y1 1673 aa21.27■■□□□ 1
AP001056.1-201ENST00000411956 INSRP06213 1382 aa21.26■□□□□ 0.99
AP001056.1-201ENST00000411956 FAM83GA6ND36 823 aa21.26■□□□□ 0.99
AP001056.1-201ENST00000411956 NWD2Q9ULI1 1742 aa21.26■□□□□ 0.99
AP001056.1-201ENST00000411956 COL5A2P05997 1499 aaPredicted RBP21.25■□□□□ 0.99
AP001056.1-201ENST00000411956 SLIT2O94813 1529 aa21.24■□□□□ 0.99
AP001056.1-201ENST00000411956 SOCS7O14512 581 aa21.24■□□□□ 0.99
AP001056.1-201ENST00000411956 HSP90AB2PQ58FF8 381 aa21.24■□□□□ 0.99
AP001056.1-201ENST00000411956 AXIN2Q9Y2T1 843 aa21.24■□□□□ 0.99
AP001056.1-201ENST00000411956 MEX3CQ5U5Q3 659 aaKnown RBP21.23■□□□□ 0.99
AP001056.1-201ENST00000411956 CFAP53Q96M91 514 aa21.23■□□□□ 0.99
AP001056.1-201ENST00000411956 FAM208AQ9UK61 1670 aaKnown RBP21.22■□□□□ 0.99
AP001056.1-201ENST00000411956 CCDC184Q52MB2 194 aa21.22■□□□□ 0.99
AP001056.1-201ENST00000411956 C8orf37Q96NL8 207 aa21.22■□□□□ 0.99
AP001056.1-201ENST00000411956 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.21■□□□□ 0.99
AP001056.1-201ENST00000411956 BTG4Q9NY30 223 aa21.2■□□□□ 0.98
AP001056.1-201ENST00000411956 ERBB3P21860 1342 aa21.2■□□□□ 0.98
AP001056.1-201ENST00000411956 RGPD1P0DJD0 1748 aa21.2■□□□□ 0.98
AP001056.1-201ENST00000411956 CCER2I3L3R5 266 aa21.19■□□□□ 0.98
AP001056.1-201ENST00000411956 EIF4A2Q14240 407 aaKnown RBP21.19■□□□□ 0.98
AP001056.1-201ENST00000411956 ANKRD24Q8TF21 1146 aa21.19■□□□□ 0.98
AP001056.1-201ENST00000411956 LTV1Q96GA3 475 aaPredicted RBP21.18■□□□□ 0.98
AP001056.1-201ENST00000411956 DIAPH1O60610 1272 aaKnown RBP21.17■□□□□ 0.98
AP001056.1-201ENST00000411956 IL13P35225 146 aa21.17■□□□□ 0.98
AP001056.1-201ENST00000411956 NGLY1Q96IV0 654 aa21.17■□□□□ 0.98
AP001056.1-201ENST00000411956 MRS2Q9HD23 443 aa21.17■□□□□ 0.98
AP001056.1-201ENST00000411956 BCL9LQ86UU0 1499 aa21.17■□□□□ 0.98
AP001056.1-201ENST00000411956 RGPD2P0DJD1 1756 aa21.17■□□□□ 0.98
AP001056.1-201ENST00000411956 FNBP4Q8N3X1 1017 aaPredicted RBP21.16■□□□□ 0.98
AP001056.1-201ENST00000411956 WDR17Q8IZU2 1322 aa21.15■□□□□ 0.98
AP001056.1-201ENST00000411956 STRN4Q9NRL3 753 aa21.15■□□□□ 0.98
AP001056.1-201ENST00000411956 AFF2P51816 1311 aa21.14■□□□□ 0.97
AP001056.1-201ENST00000411956 NCAPD2Q15021 1401 aa21.13■□□□□ 0.97
AP001056.1-201ENST00000411956 CSB-PGBD3P0DP91 1061 aa21.13■□□□□ 0.97
AP001056.1-201ENST00000411956 CRB1P82279 1406 aa21.12■□□□□ 0.97
AP001056.1-201ENST00000411956 IGSF1Q8N6C5 1336 aa21.12■□□□□ 0.97
AP001056.1-201ENST00000411956 EVA1CP58658 441 aa21.12■□□□□ 0.97
AP001056.1-201ENST00000411956 LARP1Q6PKG0 1096 aaKnown RBP21.12■□□□□ 0.97
AP001056.1-201ENST00000411956 UNC5CLQ8IV45 518 aa21.12■□□□□ 0.97
AP001056.1-201ENST00000411956 USP21Q9UK80 565 aa21.12■□□□□ 0.97
AP001056.1-201ENST00000411956 NUDCQ9Y266 331 aa21.11■□□□□ 0.97
AP001056.1-201ENST00000411956 U2SURPO15042 1029 aaKnown RBP21.1■□□□□ 0.97
AP001056.1-201ENST00000411956 NBPF6Q5VWK0 638 aa21.1■□□□□ 0.97
AP001056.1-201ENST00000411956 NBPF4Q96M43 638 aa21.1■□□□□ 0.97
AP001056.1-201ENST00000411956 EYA1Q99502 592 aa21.1■□□□□ 0.97
AP001056.1-201ENST00000411956 WNK3Q9BYP7 1800 aa21.09■□□□□ 0.97
AP001056.1-201ENST00000411956 TOM1L2Q6ZVM7 507 aa21.09■□□□□ 0.97
AP001056.1-201ENST00000411956 ATRNO75882 1429 aa21.09■□□□□ 0.97
AP001056.1-201ENST00000411956 USHBP1Q8N6Y0 703 aa21.08■□□□□ 0.97
AP001056.1-201ENST00000411956 NLRP2Q9NX02 1062 aa21.08■□□□□ 0.97
AP001056.1-201ENST00000411956 WDR43Q15061 677 aaKnown RBP eCLIP21.07■□□□□ 0.96
AP001056.1-201ENST00000411956 PNISRQ8TF01 805 aaKnown RBP21.07■□□□□ 0.96
AP001056.1-201ENST00000411956 KDRP35968 1356 aa21.07■□□□□ 0.96
AP001056.1-201ENST00000411956 U2AF1L5P0DN76 240 aaPredicted RBP21.06■□□□□ 0.96
AP001056.1-201ENST00000411956 U2AF1Q01081 240 aaKnown RBP eCLIP21.06■□□□□ 0.96
AP001056.1-201ENST00000411956 VPS72Q15906 364 aa21.06■□□□□ 0.96
AP001056.1-201ENST00000411956 CARD10Q9BWT7 1032 aa21.06■□□□□ 0.96
AP001056.1-201ENST00000411956 GLI3P10071 1580 aa21.06■□□□□ 0.96
AP001056.1-201ENST00000411956 AEBP1Q8IUX7 1158 aa21.05■□□□□ 0.96
AP001056.1-201ENST00000411956 SPATA31A1Q5TZJ5 1347 aa21.04■□□□□ 0.96
AP001056.1-201ENST00000411956 SPATA31A5Q5VU36 1347 aa21.04■□□□□ 0.96
AP001056.1-201ENST00000411956 SPATA31A7Q8IWB4 1347 aa21.04■□□□□ 0.96
AP001056.1-201ENST00000411956 SULT6B1Q6IMI4 303 aa21.04■□□□□ 0.96
AP001056.1-201ENST00000411956 PARP4Q9UKK3 1724 aaKnown RBP21.04■□□□□ 0.96
AP001056.1-201ENST00000411956 HMOX1P09601 288 aa21.03■□□□□ 0.96
AP001056.1-201ENST00000411956 TRPC5Q9UL62 973 aaPredicted RBP21.03■□□□□ 0.96
AP001056.1-201ENST00000411956 MEGF6O75095 1541 aa21.03■□□□□ 0.96
AP001056.1-201ENST00000411956 ZNF772Q68DY9 489 aaPredicted RBP21.02■□□□□ 0.96
AP001056.1-201ENST00000411956 RSPH6AQ9H0K4 717 aa21.02■□□□□ 0.96
AP001056.1-201ENST00000411956 USP35Q9P2H5 1018 aa21.02■□□□□ 0.96
AP001056.1-201ENST00000411956 ADAMTS8Q9UP79 889 aa21.02■□□□□ 0.96
AP001056.1-201ENST00000411956 CCDC9Q9Y3X0 531 aaKnown RBP21.02■□□□□ 0.96
AP001056.1-201ENST00000411956 DISP2A7MBM2 1401 aa21.02■□□□□ 0.96
AP001056.1-201ENST00000411956 FAM9BQ8IZU0 186 aa21.01■□□□□ 0.95
AP001056.1-201ENST00000411956 TCP11L2Q8N4U5 519 aa21■□□□□ 0.95
AP001056.1-201ENST00000411956 PHF23Q9BUL5 403 aaPredicted RBP20.99■□□□□ 0.95
AP001056.1-201ENST00000411956 THRAP3Q9Y2W1 955 aaKnown RBP20.99■□□□□ 0.95
AP001056.1-201ENST00000411956 THSD7AQ9UPZ6 1657 aa20.99■□□□□ 0.95
AP001056.1-201ENST00000411956 PKD1L3Q7Z443 1732 aa20.98■□□□□ 0.95
AP001056.1-201ENST00000411956 FCHSD2O94868 740 aa20.98■□□□□ 0.95
AP001056.1-201ENST00000411956 PRKAR2BP31323 418 aa20.98■□□□□ 0.95
AP001056.1-201ENST00000411956 QTRT2Q9H974 415 aaKnown RBP20.98■□□□□ 0.95
AP001056.1-201ENST00000411956 RGS17Q9UGC6 210 aaPredicted RBP20.98■□□□□ 0.95
AP001056.1-201ENST00000411956 LRRC37A3O60309 1634 aa20.97■□□□□ 0.95
AP001056.1-201ENST00000411956 OVOS2A0A0G2JMS6 1433 aa20.97■□□□□ 0.95
AP001056.1-201ENST00000411956 GJD4Q96KN9 370 aaPredicted RBP20.97■□□□□ 0.95
AP001056.1-201ENST00000411956 PLEKHG2Q9H7P9 1386 aa20.97■□□□□ 0.95
AP001056.1-201ENST00000411956 IL2RBP14784 551 aa20.96■□□□□ 0.95
AP001056.1-201ENST00000411956 BARGINQ6ZT62 677 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms