RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 NLRP13Q86W25 1043 aa10.24□□□□□ -0.77
LSM8-202ENST00000411938 ACEP12821 1306 aa10.24□□□□□ -0.77
LSM8-202ENST00000411938 LMO7Q8WWI1 1683 aa10.23□□□□□ -0.77
LSM8-202ENST00000411938 POLD1P28340 1107 aa10.23□□□□□ -0.77
LSM8-202ENST00000411938 MPHOSPH9Q99550 1183 aa10.23□□□□□ -0.77
LSM8-202ENST00000411938 GPBP1L1Q9HC44 474 aaPredicted RBP10.23□□□□□ -0.77
LSM8-202ENST00000411938 SHANK3Q9BYB0 1731 aa10.23□□□□□ -0.77
LSM8-202ENST00000411938 USP19O94966 1318 aa10.23□□□□□ -0.77
LSM8-202ENST00000411938 LRRC37A3O60309 1634 aa10.22□□□□□ -0.77
LSM8-202ENST00000411938 GRIN3BO60391 1043 aa10.22□□□□□ -0.77
LSM8-202ENST00000411938 CDCA7Q9BWT1 371 aaPredicted RBP10.22□□□□□ -0.77
LSM8-202ENST00000411938 ATP10DQ9P241 1426 aa10.22□□□□□ -0.77
LSM8-202ENST00000411938 EXOC5O00471 708 aa10.21□□□□□ -0.77
LSM8-202ENST00000411938 NLGN2Q8NFZ4 835 aa10.21□□□□□ -0.77
LSM8-202ENST00000411938 CDK19Q9BWU1 502 aa10.21□□□□□ -0.77
LSM8-202ENST00000411938 CCDC61Q9Y6R9 512 aa10.21□□□□□ -0.77
LSM8-202ENST00000411938 BCL9O00512 1426 aa10.21□□□□□ -0.78
LSM8-202ENST00000411938 ADGRB1O14514 1584 aa10.2□□□□□ -0.78
LSM8-202ENST00000411938 POLR3AO14802 1390 aaPredicted RBP10.2□□□□□ -0.78
LSM8-202ENST00000411938 ITSN1Q15811 1721 aa10.2□□□□□ -0.78
LSM8-202ENST00000411938 AATKQ6ZMQ8 1374 aa10.2□□□□□ -0.78
LSM8-202ENST00000411938 ZNF526Q8TF50 670 aaPredicted RBP10.2□□□□□ -0.78
LSM8-202ENST00000411938 WDR17Q8IZU2 1322 aa10.19□□□□□ -0.78
LSM8-202ENST00000411938 PLEKHG3A1L390 1219 aa10.19□□□□□ -0.78
LSM8-202ENST00000411938 CSB-PGBD3P0DP91 1061 aa10.19□□□□□ -0.78
LSM8-202ENST00000411938 YBX3P16989 372 aaKnown RBP eCLIP10.19□□□□□ -0.785e-8■□□□□ 8.5
LSM8-202ENST00000411938 ZNF827Q17R98 1081 aa10.19□□□□□ -0.78
LSM8-202ENST00000411938 SLC16A10Q8TF71 515 aa10.19□□□□□ -0.78
LSM8-202ENST00000411938 ACSBG1Q96GR2 724 aa10.19□□□□□ -0.78
LSM8-202ENST00000411938 CAPN15O75808 1086 aa10.18□□□□□ -0.78
LSM8-202ENST00000411938 NLRP6P59044 892 aa10.18□□□□□ -0.78
LSM8-202ENST00000411938 KDM2AQ9Y2K7 1162 aa10.18□□□□□ -0.78
LSM8-202ENST00000411938 AKAP12Q02952 1782 aa10.17□□□□□ -0.78
LSM8-202ENST00000411938 TRIM26Q12899 539 aaPredicted RBP10.17□□□□□ -0.78
LSM8-202ENST00000411938 AXIN2Q9Y2T1 843 aa10.17□□□□□ -0.78
LSM8-202ENST00000411938 KAT6BQ8WYB5 2073 aa10.16□□□□□ -0.78
LSM8-202ENST00000411938 GOLGB1Q14789 3259 aaKnown RBP10.16□□□□□ -0.78
LSM8-202ENST00000411938 CARD10Q9BWT7 1032 aa10.16□□□□□ -0.78
LSM8-202ENST00000411938 LRRC4BQ9NT99 713 aa10.16□□□□□ -0.78
LSM8-202ENST00000411938 BRD4O60885 1362 aaPredicted RBP10.15□□□□□ -0.78
LSM8-202ENST00000411938 AKT1S1Q96B36 256 aa10.15□□□□□ -0.78
LSM8-202ENST00000411938 TFCP2L1Q9NZI6 479 aa10.15□□□□□ -0.78
LSM8-202ENST00000411938 DCAF11Q8TEB1 546 aa10.14□□□□□ -0.79
LSM8-202ENST00000411938 TOPAZ1Q8N9V7 1692 aa10.14□□□□□ -0.79
LSM8-202ENST00000411938 USP6P35125 1406 aa10.14□□□□□ -0.79
LSM8-202ENST00000411938 PNPLA7Q6ZV29 1317 aa10.13□□□□□ -0.79
LSM8-202ENST00000411938 SOX12O15370 315 aa10.13□□□□□ -0.79
LSM8-202ENST00000411938 MSH5O43196 834 aa10.13□□□□□ -0.79
LSM8-202ENST00000411938 APLP1P51693 650 aa10.13□□□□□ -0.79
LSM8-202ENST00000411938 SRPK2P78362 688 aaKnown RBP10.13□□□□□ -0.79
LSM8-202ENST00000411938 PAPPAQ13219 1627 aa10.13□□□□□ -0.79
LSM8-202ENST00000411938 TNS2Q63HR2 1409 aa10.12□□□□□ -0.79
LSM8-202ENST00000411938 CCDC7Q96M83 1385 aa10.12□□□□□ -0.79
LSM8-202ENST00000411938 WNK3Q9BYP7 1800 aa10.12□□□□□ -0.79
LSM8-202ENST00000411938 PPIP5K1Q6PFW1 1433 aa10.11□□□□□ -0.79
LSM8-202ENST00000411938 SLC27A3Q5K4L6 730 aa10.11□□□□□ -0.79
LSM8-202ENST00000411938 COL13A1Q5TAT6 717 aaPredicted RBP10.11□□□□□ -0.79
LSM8-202ENST00000411938 ARHGEF25Q86VW2 580 aa10.11□□□□□ -0.79
LSM8-202ENST00000411938 NHSQ6T4R5 1651 aa10.11□□□□□ -0.79
LSM8-202ENST00000411938 ADCY9O60503 1353 aa10.11□□□□□ -0.79
LSM8-202ENST00000411938 CPSF1Q10570 1443 aaKnown RBP10.1□□□□□ -0.79
LSM8-202ENST00000411938 KIF3CO14782 793 aa10.1□□□□□ -0.79
LSM8-202ENST00000411938 KCNQ4P56696 695 aa10.1□□□□□ -0.79
LSM8-202ENST00000411938 TNS4Q8IZW8 715 aa10.1□□□□□ -0.79
LSM8-202ENST00000411938 DNAJC5GQ8N7S2 189 aa10.1□□□□□ -0.79
LSM8-202ENST00000411938 CABP2Q9NPB3 220 aa10.1□□□□□ -0.79
LSM8-202ENST00000411938 SLIT3O75094 1523 aa10.1□□□□□ -0.79
LSM8-202ENST00000411938 ARHGEF28Q8N1W1 1705 aaKnown RBP10.1□□□□□ -0.79
LSM8-202ENST00000411938 COL18A1P39060 1754 aa10.09□□□□□ -0.79
LSM8-202ENST00000411938 MSL1Q68DK7 614 aa10.09□□□□□ -0.79
LSM8-202ENST00000411938 KCNH5Q8NCM2 988 aa10.09□□□□□ -0.79
LSM8-202ENST00000411938 NLRP2Q9NX02 1062 aa10.09□□□□□ -0.79
LSM8-202ENST00000411938 CABP1Q9NZU7 370 aa10.09□□□□□ -0.79
LSM8-202ENST00000411938 BTAF1O14981 1849 aa10.09□□□□□ -0.79
LSM8-202ENST00000411938 PRELPP51888 382 aa10.08□□□□□ -0.8
LSM8-202ENST00000411938 STAC3Q96MF2 364 aa10.08□□□□□ -0.8
LSM8-202ENST00000411938 IL2RBP14784 551 aa10.07□□□□□ -0.8
LSM8-202ENST00000411938 SYTL4Q96C24 671 aaPredicted RBP10.07□□□□□ -0.8
LSM8-202ENST00000411938 WWC3Q9ULE0 1092 aa10.07□□□□□ -0.8
LSM8-202ENST00000411938 CD2APQ9Y5K6 639 aa10.07□□□□□ -0.8
LSM8-202ENST00000411938 COL24A1Q17RW2 1714 aa10.07□□□□□ -0.8
LSM8-202ENST00000411938 ABCC6O95255 1503 aa10.07□□□□□ -0.8
LSM8-202ENST00000411938 RGPD5Q99666 1765 aa10.06□□□□□ -0.8
LSM8-202ENST00000411938 COL23A1Q86Y22 540 aaPredicted RBP10.06□□□□□ -0.8
LSM8-202ENST00000411938 DDX54Q8TDD1 881 aaKnown RBP10.06□□□□□ -0.8
LSM8-202ENST00000411938 QSER1Q2KHR3 1735 aa10.05□□□□□ -0.8
LSM8-202ENST00000411938 TRPM1Q7Z4N2 1603 aa10.05□□□□□ -0.8
LSM8-202ENST00000411938 TOMM70O94826 608 aa10.05□□□□□ -0.8
LSM8-202ENST00000411938 PRIM1P49642 420 aaKnown RBP10.04□□□□□ -0.8
LSM8-202ENST00000411938 CCNL1Q9UK58 526 aaPredicted RBP10.04□□□□□ -0.8
LSM8-202ENST00000411938 TTC21BQ7Z4L5 1316 aa10.04□□□□□ -0.8
LSM8-202ENST00000411938 PIK3C2AO00443 1686 aa10.03□□□□□ -0.8
LSM8-202ENST00000411938 HTRA3P83110 453 aa10.03□□□□□ -0.8
LSM8-202ENST00000411938 KLRG1Q96E93 195 aa10.03□□□□□ -0.8
LSM8-202ENST00000411938 CENPJQ9HC77 1338 aaPredicted RBP10.03□□□□□ -0.8
LSM8-202ENST00000411938 TUBGCP6Q96RT7 1819 aa10.03□□□□□ -0.8
LSM8-202ENST00000411938 JMYQ8N9B5 988 aa10.02□□□□□ -0.81
LSM8-202ENST00000411938 ERBB3P21860 1342 aa10.02□□□□□ -0.81
LSM8-202ENST00000411938 IGSF1Q8N6C5 1336 aa10.02□□□□□ -0.81
LSM8-202ENST00000411938 ZEB1P37275 1124 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms