RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 CDC14CA4D256 554 aa6.79□□□□□ -1.32
HMGB3P2-201ENST00000411913 IRS1P35568 1242 aa6.79□□□□□ -1.32
HMGB3P2-201ENST00000411913 MARSP56192 900 aaKnown RBP6.79□□□□□ -1.32
HMGB3P2-201ENST00000411913 CBLBQ13191 982 aa6.79□□□□□ -1.32
HMGB3P2-201ENST00000411913 GPAT2Q6NUI2 795 aa6.79□□□□□ -1.32
HMGB3P2-201ENST00000411913 PARP9Q8IXQ6 854 aa6.79□□□□□ -1.32
HMGB3P2-201ENST00000411913 TRMT44Q8IYL2 757 aaKnown RBP6.79□□□□□ -1.32
HMGB3P2-201ENST00000411913 VWA5B2Q8N398 1253 aa6.79□□□□□ -1.32
HMGB3P2-201ENST00000411913 RNFT1Q5M7Z0 435 aa6.78□□□□□ -1.32
HMGB3P2-201ENST00000411913 PPP1R26Q5T8A7 1209 aaPredicted RBP6.78□□□□□ -1.32
HMGB3P2-201ENST00000411913 SV2AQ7L0J3 742 aa6.78□□□□□ -1.32
HMGB3P2-201ENST00000411913 SH3BP5LQ7L8J4 393 aa6.78□□□□□ -1.32
HMGB3P2-201ENST00000411913 HELBQ8NG08 1087 aaPredicted RBP6.78□□□□□ -1.32
HMGB3P2-201ENST00000411913 SPINT1O43278 529 aa6.77□□□□□ -1.33
HMGB3P2-201ENST00000411913 WHAMMQ8TF30 809 aa6.77□□□□□ -1.33
HMGB3P2-201ENST00000411913 IGHA1P01876 353 aa6.76□□□□□ -1.33
HMGB3P2-201ENST00000411913 QPCTQ16769 361 aa6.76□□□□□ -1.33
HMGB3P2-201ENST00000411913 ZC3H15Q8WU90 426 aaKnown RBP6.76□□□□□ -1.33
HMGB3P2-201ENST00000411913 LIMD1Q9UGP4 676 aa6.76□□□□□ -1.33
HMGB3P2-201ENST00000411913 DNMT3AQ9Y6K1 912 aaPredicted RBP6.76□□□□□ -1.33
HMGB3P2-201ENST00000411913 SLC35F4A4IF30 521 aa6.75□□□□□ -1.33
HMGB3P2-201ENST00000411913 SLURP2P0DP57 97 aa6.75□□□□□ -1.33
HMGB3P2-201ENST00000411913 ITGA6P23229 1130 aa6.75□□□□□ -1.33
HMGB3P2-201ENST00000411913 ERFEQ4G0M1 354 aa6.75□□□□□ -1.33
HMGB3P2-201ENST00000411913 Q6ZVU0 165 aa6.75□□□□□ -1.33
HMGB3P2-201ENST00000411913 GPKOWQ92917 476 aaPredicted RBP eCLIP6.75□□□□□ -1.33
HMGB3P2-201ENST00000411913 TRIM66O15016 1216 aa6.74□□□□□ -1.33
HMGB3P2-201ENST00000411913 LILRB3O75022 631 aa6.74□□□□□ -1.33
HMGB3P2-201ENST00000411913 RELBQ01201 579 aa6.74□□□□□ -1.33
HMGB3P2-201ENST00000411913 DHX9Q08211 1270 aaKnown RBP6.74□□□□□ -1.33
HMGB3P2-201ENST00000411913 MYSM1Q5VVJ2 828 aa6.74□□□□□ -1.33
HMGB3P2-201ENST00000411913 KANK3Q6NY19 840 aa6.74□□□□□ -1.33
HMGB3P2-201ENST00000411913 SCARF2Q96GP6 870 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P2-201ENST00000411913 AGBL1Q96MI9 1066 aa6.74□□□□□ -1.33
HMGB3P2-201ENST00000411913 POLMQ9NP87 494 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P2-201ENST00000411913 ARHGEF15O94989 841 aa6.73□□□□□ -1.33
HMGB3P2-201ENST00000411913 CTSOP43234 321 aaPredicted RBP6.73□□□□□ -1.33
HMGB3P2-201ENST00000411913 FOXK2Q01167 660 aa6.73□□□□□ -1.33
HMGB3P2-201ENST00000411913 TUSC1Q2TAM9 212 aa6.73□□□□□ -1.33
HMGB3P2-201ENST00000411913 SLC10A4Q96EP9 437 aa6.73□□□□□ -1.33
HMGB3P2-201ENST00000411913 KCTD15Q96SI1 283 aaPredicted RBP6.73□□□□□ -1.33
HMGB3P2-201ENST00000411913 ARHGAP9Q9BRR9 750 aa6.73□□□□□ -1.33
HMGB3P2-201ENST00000411913 MAP3K10Q02779 954 aa6.72□□□□□ -1.33
HMGB3P2-201ENST00000411913 RTL5Q5HYW3 569 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P2-201ENST00000411913 ZBTB33Q86T24 672 aa6.72□□□□□ -1.33
HMGB3P2-201ENST00000411913 AK7Q96M32 723 aa6.72□□□□□ -1.33
HMGB3P2-201ENST00000411913 INSM2Q96T92 566 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P2-201ENST00000411913 CDV3Q9UKY7 258 aaKnown RBP6.72□□□□□ -1.33
HMGB3P2-201ENST00000411913 ADAMTS2O95450 1211 aa6.71□□□□□ -1.34
HMGB3P2-201ENST00000411913 PDXDC2PQ6P474 469 aa6.7□□□□□ -1.34
HMGB3P2-201ENST00000411913 ZNF395Q9H8N7 513 aaPredicted RBP6.7□□□□□ -1.34
HMGB3P2-201ENST00000411913 LYPD4Q6UWN0 246 aa6.69□□□□□ -1.34
HMGB3P2-201ENST00000411913 ENAMQ9NRM1 1142 aa6.69□□□□□ -1.34
HMGB3P2-201ENST00000411913 CLK2P49760 499 aaKnown RBP6.68□□□□□ -1.34
HMGB3P2-201ENST00000411913 CTDSPL2Q05D32 466 aa6.68□□□□□ -1.34
HMGB3P2-201ENST00000411913 INTS6LQ5JSJ4 861 aaKnown RBP6.68□□□□□ -1.34
HMGB3P2-201ENST00000411913 RNF217Q8TC41 542 aa6.68□□□□□ -1.34
HMGB3P2-201ENST00000411913 FKBPLQ9UIM3 349 aa6.68□□□□□ -1.34
HMGB3P2-201ENST00000411913 RAB15P59190 212 aa6.67□□□□□ -1.34
HMGB3P2-201ENST00000411913 SRSF11Q05519 484 aaKnown RBP6.67□□□□□ -1.34
HMGB3P2-201ENST00000411913 POLR3EQ9NVU0 708 aa6.67□□□□□ -1.34
HMGB3P2-201ENST00000411913 CELA2BP08218 269 aaPredicted RBP6.66□□□□□ -1.34
HMGB3P2-201ENST00000411913 PTK2Q05397 1052 aa6.66□□□□□ -1.34
HMGB3P2-201ENST00000411913 PDE4DQ08499 809 aa6.66□□□□□ -1.34
HMGB3P2-201ENST00000411913 RSPH6AQ9H0K4 717 aa6.66□□□□□ -1.34
HMGB3P2-201ENST00000411913 SENP3-EIF4A1A0A087X0R7 540 aa6.65□□□□□ -1.34
HMGB3P2-201ENST00000411913 PHF20L1A8MW92 1017 aa6.65□□□□□ -1.34
HMGB3P2-201ENST00000411913 TMPRSS4Q9NRS4 437 aa6.65□□□□□ -1.34
HMGB3P2-201ENST00000411913 MSTNO14793 375 aa6.64□□□□□ -1.35
HMGB3P2-201ENST00000411913 ADH1AP07327 375 aa6.64□□□□□ -1.35
HMGB3P2-201ENST00000411913 NBPF20Q3BBV1 942 aa6.64□□□□□ -1.35
HMGB3P2-201ENST00000411913 FOXR1Q6PIV2 292 aa6.64□□□□□ -1.35
HMGB3P2-201ENST00000411913 LYSMD3Q7Z3D4 306 aa6.64□□□□□ -1.35
HMGB3P2-201ENST00000411913 LRRN4Q8WUT4 740 aa6.64□□□□□ -1.35
HMGB3P2-201ENST00000411913 ATP1B4Q9UN42 357 aaPredicted RBP6.64□□□□□ -1.35
HMGB3P2-201ENST00000411913 PTGIRP43119 386 aa6.63□□□□□ -1.35
HMGB3P2-201ENST00000411913 GAS6Q14393 721 aa6.63□□□□□ -1.35
HMGB3P2-201ENST00000411913 NR6A1Q15406 480 aa6.63□□□□□ -1.35
HMGB3P2-201ENST00000411913 PODNQ7Z5L7 613 aa6.63□□□□□ -1.35
HMGB3P2-201ENST00000411913 ZNF784Q8NCA9 323 aaPredicted RBP6.63□□□□□ -1.35
HMGB3P2-201ENST00000411913 ADAM32Q8TC27 787 aa6.63□□□□□ -1.35
HMGB3P2-201ENST00000411913 CUEDC1Q9NWM3 386 aaPredicted RBP6.63□□□□□ -1.35
HMGB3P2-201ENST00000411913 ZC3H4Q9UPT8 1303 aaKnown RBP6.63□□□□□ -1.35
HMGB3P2-201ENST00000411913 CNTNAP5Q8WYK1 1306 aa6.62□□□□□ -1.35
HMGB3P2-201ENST00000411913 PLA2G4EQ3MJ16 856 aa6.62□□□□□ -1.35
HMGB3P2-201ENST00000411913 FOXD4L5Q5VV16 416 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P2-201ENST00000411913 PRICKLE2Q7Z3G6 844 aa6.62□□□□□ -1.35
HMGB3P2-201ENST00000411913 BEND7Q8N7W2 519 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P2-201ENST00000411913 NEDD1Q8NHV4 660 aa6.62□□□□□ -1.35
HMGB3P2-201ENST00000411913 RHOQP17081 205 aa6.61□□□□□ -1.35
HMGB3P2-201ENST00000411913 ADD1P35611 737 aaKnown RBP6.61□□□□□ -1.35
HMGB3P2-201ENST00000411913 RIPOR1Q6ZS17 1223 aa6.61□□□□□ -1.35
HMGB3P2-201ENST00000411913 DZIP3Q86Y13 1208 aaKnown RBP6.61□□□□□ -1.35
HMGB3P2-201ENST00000411913 DCAF5Q96JK2 942 aa6.61□□□□□ -1.35
HMGB3P2-201ENST00000411913 MBIPQ9NS73 344 aa6.61□□□□□ -1.35
HMGB3P2-201ENST00000411913 GPSM3Q9Y4H4 160 aa6.61□□□□□ -1.35
HMGB3P2-201ENST00000411913 ERVH48-1M5A8F1 160 aa6.6□□□□□ -1.35
HMGB3P2-201ENST00000411913 GPR25O00155 361 aa6.6□□□□□ -1.35
HMGB3P2-201ENST00000411913 ADAM23O75077 832 aa6.6□□□□□ -1.35
HMGB3P2-201ENST00000411913 XP32Q5T750 250 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms