RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 CDC14CA4D256 554 aa6.79□□□□□ -1.32
HMGB3P2-201ENST00000411913 IRS1P35568 1242 aa6.79□□□□□ -1.32
HMGB3P2-201ENST00000411913 MARSP56192 900 aaKnown RBP6.79□□□□□ -1.32
HMGB3P2-201ENST00000411913 CBLBQ13191 982 aa6.79□□□□□ -1.32
HMGB3P2-201ENST00000411913 GPAT2Q6NUI2 795 aa6.79□□□□□ -1.32
HMGB3P2-201ENST00000411913 PARP9Q8IXQ6 854 aa6.79□□□□□ -1.32
HMGB3P2-201ENST00000411913 TRMT44Q8IYL2 757 aaKnown RBP6.79□□□□□ -1.32
HMGB3P2-201ENST00000411913 VWA5B2Q8N398 1253 aa6.79□□□□□ -1.32
HMGB3P2-201ENST00000411913 RNFT1Q5M7Z0 435 aa6.78□□□□□ -1.32
HMGB3P2-201ENST00000411913 PPP1R26Q5T8A7 1209 aaPredicted RBP6.78□□□□□ -1.32
HMGB3P2-201ENST00000411913 SV2AQ7L0J3 742 aa6.78□□□□□ -1.32
HMGB3P2-201ENST00000411913 SH3BP5LQ7L8J4 393 aa6.78□□□□□ -1.32
HMGB3P2-201ENST00000411913 HELBQ8NG08 1087 aaPredicted RBP6.78□□□□□ -1.32
HMGB3P2-201ENST00000411913 SPINT1O43278 529 aa6.77□□□□□ -1.33
HMGB3P2-201ENST00000411913 WHAMMQ8TF30 809 aa6.77□□□□□ -1.33
HMGB3P2-201ENST00000411913 IGHA1P01876 353 aa6.76□□□□□ -1.33
HMGB3P2-201ENST00000411913 QPCTQ16769 361 aa6.76□□□□□ -1.33
HMGB3P2-201ENST00000411913 ZC3H15Q8WU90 426 aaKnown RBP6.76□□□□□ -1.33
HMGB3P2-201ENST00000411913 LIMD1Q9UGP4 676 aa6.76□□□□□ -1.33
HMGB3P2-201ENST00000411913 DNMT3AQ9Y6K1 912 aaPredicted RBP6.76□□□□□ -1.33
HMGB3P2-201ENST00000411913 SLC35F4A4IF30 521 aa6.75□□□□□ -1.33
HMGB3P2-201ENST00000411913 SLURP2P0DP57 97 aa6.75□□□□□ -1.33
HMGB3P2-201ENST00000411913 ITGA6P23229 1130 aa6.75□□□□□ -1.33
HMGB3P2-201ENST00000411913 ERFEQ4G0M1 354 aa6.75□□□□□ -1.33
HMGB3P2-201ENST00000411913 Q6ZVU0 165 aa6.75□□□□□ -1.33
HMGB3P2-201ENST00000411913 GPKOWQ92917 476 aaPredicted RBP eCLIP6.75□□□□□ -1.33
HMGB3P2-201ENST00000411913 TRIM66O15016 1216 aa6.74□□□□□ -1.33
HMGB3P2-201ENST00000411913 LILRB3O75022 631 aa6.74□□□□□ -1.33
HMGB3P2-201ENST00000411913 RELBQ01201 579 aa6.74□□□□□ -1.33
HMGB3P2-201ENST00000411913 DHX9Q08211 1270 aaKnown RBP6.74□□□□□ -1.33
HMGB3P2-201ENST00000411913 MYSM1Q5VVJ2 828 aa6.74□□□□□ -1.33
HMGB3P2-201ENST00000411913 KANK3Q6NY19 840 aa6.74□□□□□ -1.33
HMGB3P2-201ENST00000411913 SCARF2Q96GP6 870 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P2-201ENST00000411913 AGBL1Q96MI9 1066 aa6.74□□□□□ -1.33
HMGB3P2-201ENST00000411913 POLMQ9NP87 494 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P2-201ENST00000411913 ARHGEF15O94989 841 aa6.73□□□□□ -1.33
HMGB3P2-201ENST00000411913 CTSOP43234 321 aaPredicted RBP6.73□□□□□ -1.33
HMGB3P2-201ENST00000411913 FOXK2Q01167 660 aa6.73□□□□□ -1.33
HMGB3P2-201ENST00000411913 TUSC1Q2TAM9 212 aa6.73□□□□□ -1.33
HMGB3P2-201ENST00000411913 SLC10A4Q96EP9 437 aa6.73□□□□□ -1.33
HMGB3P2-201ENST00000411913 KCTD15Q96SI1 283 aaPredicted RBP6.73□□□□□ -1.33
HMGB3P2-201ENST00000411913 ARHGAP9Q9BRR9 750 aa6.73□□□□□ -1.33
HMGB3P2-201ENST00000411913 MAP3K10Q02779 954 aa6.72□□□□□ -1.33
HMGB3P2-201ENST00000411913 RTL5Q5HYW3 569 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P2-201ENST00000411913 ZBTB33Q86T24 672 aa6.72□□□□□ -1.33
HMGB3P2-201ENST00000411913 AK7Q96M32 723 aa6.72□□□□□ -1.33
HMGB3P2-201ENST00000411913 INSM2Q96T92 566 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P2-201ENST00000411913 CDV3Q9UKY7 258 aaKnown RBP6.72□□□□□ -1.33
HMGB3P2-201ENST00000411913 ADAMTS2O95450 1211 aa6.71□□□□□ -1.34
HMGB3P2-201ENST00000411913 PDXDC2PQ6P474 469 aa6.7□□□□□ -1.34
HMGB3P2-201ENST00000411913 ZNF395Q9H8N7 513 aaPredicted RBP6.7□□□□□ -1.34
HMGB3P2-201ENST00000411913 LYPD4Q6UWN0 246 aa6.69□□□□□ -1.34
HMGB3P2-201ENST00000411913 ENAMQ9NRM1 1142 aa6.69□□□□□ -1.34
HMGB3P2-201ENST00000411913 CLK2P49760 499 aaKnown RBP6.68□□□□□ -1.34
HMGB3P2-201ENST00000411913 CTDSPL2Q05D32 466 aa6.68□□□□□ -1.34
HMGB3P2-201ENST00000411913 INTS6LQ5JSJ4 861 aaKnown RBP6.68□□□□□ -1.34
HMGB3P2-201ENST00000411913 RNF217Q8TC41 542 aa6.68□□□□□ -1.34
HMGB3P2-201ENST00000411913 FKBPLQ9UIM3 349 aa6.68□□□□□ -1.34
HMGB3P2-201ENST00000411913 RAB15P59190 212 aa6.67□□□□□ -1.34
HMGB3P2-201ENST00000411913 SRSF11Q05519 484 aaKnown RBP6.67□□□□□ -1.34
HMGB3P2-201ENST00000411913 POLR3EQ9NVU0 708 aa6.67□□□□□ -1.34
HMGB3P2-201ENST00000411913 CELA2BP08218 269 aaPredicted RBP6.66□□□□□ -1.34
HMGB3P2-201ENST00000411913 PTK2Q05397 1052 aa6.66□□□□□ -1.34
HMGB3P2-201ENST00000411913 PDE4DQ08499 809 aa6.66□□□□□ -1.34
HMGB3P2-201ENST00000411913 RSPH6AQ9H0K4 717 aa6.66□□□□□ -1.34
HMGB3P2-201ENST00000411913 SENP3-EIF4A1A0A087X0R7 540 aa6.65□□□□□ -1.34
HMGB3P2-201ENST00000411913 PHF20L1A8MW92 1017 aa6.65□□□□□ -1.34
HMGB3P2-201ENST00000411913 TMPRSS4Q9NRS4 437 aa6.65□□□□□ -1.34
HMGB3P2-201ENST00000411913 MSTNO14793 375 aa6.64□□□□□ -1.35
HMGB3P2-201ENST00000411913 ADH1AP07327 375 aa6.64□□□□□ -1.35
HMGB3P2-201ENST00000411913 NBPF20Q3BBV1 942 aa6.64□□□□□ -1.35
HMGB3P2-201ENST00000411913 FOXR1Q6PIV2 292 aa6.64□□□□□ -1.35
HMGB3P2-201ENST00000411913 LYSMD3Q7Z3D4 306 aa6.64□□□□□ -1.35
HMGB3P2-201ENST00000411913 LRRN4Q8WUT4 740 aa6.64□□□□□ -1.35
HMGB3P2-201ENST00000411913 ATP1B4Q9UN42 357 aaPredicted RBP6.64□□□□□ -1.35
HMGB3P2-201ENST00000411913 PTGIRP43119 386 aa6.63□□□□□ -1.35
HMGB3P2-201ENST00000411913 GAS6Q14393 721 aa6.63□□□□□ -1.35
HMGB3P2-201ENST00000411913 NR6A1Q15406 480 aa6.63□□□□□ -1.35
HMGB3P2-201ENST00000411913 PODNQ7Z5L7 613 aa6.63□□□□□ -1.35
HMGB3P2-201ENST00000411913 ZNF784Q8NCA9 323 aaPredicted RBP6.63□□□□□ -1.35
HMGB3P2-201ENST00000411913 ADAM32Q8TC27 787 aa6.63□□□□□ -1.35
HMGB3P2-201ENST00000411913 CUEDC1Q9NWM3 386 aaPredicted RBP6.63□□□□□ -1.35
HMGB3P2-201ENST00000411913 ZC3H4Q9UPT8 1303 aaKnown RBP6.63□□□□□ -1.35
HMGB3P2-201ENST00000411913 CNTNAP5Q8WYK1 1306 aa6.62□□□□□ -1.35
HMGB3P2-201ENST00000411913 PLA2G4EQ3MJ16 856 aa6.62□□□□□ -1.35
HMGB3P2-201ENST00000411913 FOXD4L5Q5VV16 416 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P2-201ENST00000411913 PRICKLE2Q7Z3G6 844 aa6.62□□□□□ -1.35
HMGB3P2-201ENST00000411913 BEND7Q8N7W2 519 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P2-201ENST00000411913 NEDD1Q8NHV4 660 aa6.62□□□□□ -1.35
HMGB3P2-201ENST00000411913 RHOQP17081 205 aa6.61□□□□□ -1.35
HMGB3P2-201ENST00000411913 ADD1P35611 737 aaKnown RBP6.61□□□□□ -1.35
HMGB3P2-201ENST00000411913 RIPOR1Q6ZS17 1223 aa6.61□□□□□ -1.35
HMGB3P2-201ENST00000411913 DZIP3Q86Y13 1208 aaKnown RBP6.61□□□□□ -1.35
HMGB3P2-201ENST00000411913 DCAF5Q96JK2 942 aa6.61□□□□□ -1.35
HMGB3P2-201ENST00000411913 MBIPQ9NS73 344 aa6.61□□□□□ -1.35
HMGB3P2-201ENST00000411913 GPSM3Q9Y4H4 160 aa6.61□□□□□ -1.35
HMGB3P2-201ENST00000411913 ERVH48-1M5A8F1 160 aa6.6□□□□□ -1.35
HMGB3P2-201ENST00000411913 GPR25O00155 361 aa6.6□□□□□ -1.35
HMGB3P2-201ENST00000411913 ADAM23O75077 832 aa6.6□□□□□ -1.35
HMGB3P2-201ENST00000411913 XP32Q5T750 250 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms