RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 FBLN1P23142 703 aa24.99■■□□□ 1.59
CDC42-204ENST00000411827 DIAPH1O60610 1272 aaKnown RBP24.98■■□□□ 1.59
CDC42-204ENST00000411827 PLEKHG5O94827 1062 aa24.98■■□□□ 1.59
CDC42-204ENST00000411827 LTN1O94822 1766 aa24.96■■□□□ 1.59
CDC42-204ENST00000411827 HSP90AB2PQ58FF8 381 aa24.94■■□□□ 1.58
CDC42-204ENST00000411827 RGS17Q9UGC6 210 aaPredicted RBP24.94■■□□□ 1.58
CDC42-204ENST00000411827 ZBTB7CA1YPR0 619 aa24.93■■□□□ 1.58
CDC42-204ENST00000411827 NUTM2BA6NNL0 878 aaPredicted RBP24.93■■□□□ 1.58
CDC42-204ENST00000411827 NUTM2EB1AL46 878 aaPredicted RBP24.93■■□□□ 1.58
CDC42-204ENST00000411827 NUTM2AQ8IVF1 878 aaPredicted RBP24.93■■□□□ 1.58
CDC42-204ENST00000411827 COL14A1Q05707 1796 aaKnown RBP24.93■■□□□ 1.58
CDC42-204ENST00000411827 COL3A1P02461 1466 aaPredicted RBP24.92■■□□□ 1.58
CDC42-204ENST00000411827 FAM83GA6ND36 823 aa24.92■■□□□ 1.58
CDC42-204ENST00000411827 WDR43Q15061 677 aaKnown RBP eCLIP24.92■■□□□ 1.58
CDC42-204ENST00000411827 PNISRQ8TF01 805 aaKnown RBP24.91■■□□□ 1.58
CDC42-204ENST00000411827 PNNQ9H307 717 aaKnown RBP24.91■■□□□ 1.58
CDC42-204ENST00000411827 PEAK1Q9H792 1746 aa24.91■■□□□ 1.58
CDC42-204ENST00000411827 ADAMTS2O95450 1211 aa24.9■■□□□ 1.58
CDC42-204ENST00000411827 IL13P35225 146 aa24.9■■□□□ 1.58
CDC42-204ENST00000411827 COL18A1P39060 1754 aa24.9■■□□□ 1.58
CDC42-204ENST00000411827 EIF4A2Q14240 407 aaKnown RBP24.89■■□□□ 1.58
CDC42-204ENST00000411827 CHRNA2Q15822 529 aa24.89■■□□□ 1.58
CDC42-204ENST00000411827 ERBB3P21860 1342 aa24.88■■□□□ 1.57
CDC42-204ENST00000411827 AXIN2Q9Y2T1 843 aa24.88■■□□□ 1.57
CDC42-204ENST00000411827 LMO7Q8WWI1 1683 aa24.88■■□□□ 1.57
CDC42-204ENST00000411827 ANKRD24Q8TF21 1146 aa24.87■■□□□ 1.57
CDC42-204ENST00000411827 EVA1CP58658 441 aa24.86■■□□□ 1.57
CDC42-204ENST00000411827 CCDC184Q52MB2 194 aa24.86■■□□□ 1.57
CDC42-204ENST00000411827 MEX3CQ5U5Q3 659 aaKnown RBP24.86■■□□□ 1.57
CDC42-204ENST00000411827 FNBP4Q8N3X1 1017 aaPredicted RBP24.85■■□□□ 1.57
CDC42-204ENST00000411827 NGLY1Q96IV0 654 aa24.85■■□□□ 1.57
CDC42-204ENST00000411827 BTG4Q9NY30 223 aa24.85■■□□□ 1.57
CDC42-204ENST00000411827 WDR17Q8IZU2 1322 aa24.85■■□□□ 1.57
CDC42-204ENST00000411827 CAMTA1Q9Y6Y1 1673 aa24.85■■□□□ 1.57
CDC42-204ENST00000411827 FCHSD2O94868 740 aa24.84■■□□□ 1.57
CDC42-204ENST00000411827 COL5A2P05997 1499 aaPredicted RBP24.83■■□□□ 1.57
CDC42-204ENST00000411827 SLIT2O94813 1529 aa24.83■■□□□ 1.57
CDC42-204ENST00000411827 FAM208AQ9UK61 1670 aaKnown RBP24.83■■□□□ 1.57
CDC42-204ENST00000411827 U2SURPO15042 1029 aaKnown RBP24.83■■□□□ 1.57
CDC42-204ENST00000411827 U2AF1L5P0DN76 240 aaPredicted RBP24.83■■□□□ 1.57
CDC42-204ENST00000411827 CSB-PGBD3P0DP91 1061 aa24.83■■□□□ 1.57
CDC42-204ENST00000411827 U2AF1Q01081 240 aaKnown RBP eCLIP24.83■■□□□ 1.57
CDC42-204ENST00000411827 IGSF1Q8N6C5 1336 aa24.83■■□□□ 1.56
CDC42-204ENST00000411827 PLEKHG2Q9H7P9 1386 aa24.82■■□□□ 1.56
CDC42-204ENST00000411827 NWD2Q9ULI1 1742 aa24.82■■□□□ 1.56
CDC42-204ENST00000411827 LRP6O75581 1613 aa24.82■■□□□ 1.56
CDC42-204ENST00000411827 LTV1Q96GA3 475 aaPredicted RBP24.81■■□□□ 1.56
CDC42-204ENST00000411827 C8orf37Q96NL8 207 aa24.81■■□□□ 1.56
CDC42-204ENST00000411827 EYA1Q99502 592 aa24.8■■□□□ 1.56
CDC42-204ENST00000411827 NEFMP07197 916 aa24.79■■□□□ 1.56
CDC42-204ENST00000411827 UNC5CLQ8IV45 518 aa24.79■■□□□ 1.56
CDC42-204ENST00000411827 CARD10Q9BWT7 1032 aa24.79■■□□□ 1.56
CDC42-204ENST00000411827 KDRP35968 1356 aa24.79■■□□□ 1.56
CDC42-204ENST00000411827 NLRP2Q9NX02 1062 aa24.78■■□□□ 1.56
CDC42-204ENST00000411827 ADAMTS8Q9UP79 889 aa24.78■■□□□ 1.56
CDC42-204ENST00000411827 CRB1P82279 1406 aa24.78■■□□□ 1.56
CDC42-204ENST00000411827 NCAPD2Q15021 1401 aa24.78■■□□□ 1.56
CDC42-204ENST00000411827 TOM1L2Q6ZVM7 507 aa24.77■■□□□ 1.56
CDC42-204ENST00000411827 FAM9BQ8IZU0 186 aa24.77■■□□□ 1.56
CDC42-204ENST00000411827 PLCH1Q4KWH8 1693 aa24.76■■□□□ 1.55
CDC42-204ENST00000411827 RGPD1P0DJD0 1748 aa24.76■■□□□ 1.55
CDC42-204ENST00000411827 NBPF6Q5VWK0 638 aa24.76■■□□□ 1.55
CDC42-204ENST00000411827 POTEAQ6S8J7 498 aa24.76■■□□□ 1.55
CDC42-204ENST00000411827 NBPF4Q96M43 638 aa24.76■■□□□ 1.55
CDC42-204ENST00000411827 SULT6B1Q6IMI4 303 aa24.75■■□□□ 1.55
CDC42-204ENST00000411827 STRN4Q9NRL3 753 aa24.75■■□□□ 1.55
CDC42-204ENST00000411827 THRAP3Q9Y2W1 955 aaKnown RBP24.75■■□□□ 1.55
CDC42-204ENST00000411827 RGPD5Q99666 1765 aa24.75■■□□□ 1.55
CDC42-204ENST00000411827 NGEFQ8N5V2 710 aa24.74■■□□□ 1.55
CDC42-204ENST00000411827 USP21Q9UK80 565 aa24.74■■□□□ 1.55
CDC42-204ENST00000411827 VPS72Q15906 364 aa24.73■■□□□ 1.55
CDC42-204ENST00000411827 CDCA7Q9BWT1 371 aaPredicted RBP24.73■■□□□ 1.55
CDC42-204ENST00000411827 BCL9LQ86UU0 1499 aa24.72■■□□□ 1.55
CDC42-204ENST00000411827 LARP1Q6PKG0 1096 aaKnown RBP24.72■■□□□ 1.55
CDC42-204ENST00000411827 RUNDC1Q96C34 613 aa24.72■■□□□ 1.55
CDC42-204ENST00000411827 RSPH6AQ9H0K4 717 aa24.72■■□□□ 1.55
CDC42-204ENST00000411827 AFF2P51816 1311 aa24.71■■□□□ 1.55
CDC42-204ENST00000411827 RAPGEF4Q8WZA2 1011 aa24.71■■□□□ 1.55
CDC42-204ENST00000411827 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.71■■□□□ 1.55
CDC42-204ENST00000411827 NRAPQ86VF7 1730 aa24.7■■□□□ 1.54
CDC42-204ENST00000411827 MAPK8IP3Q9UPT6 1336 aa24.7■■□□□ 1.54
CDC42-204ENST00000411827 NCBP3Q53F19 620 aaKnown RBP24.7■■□□□ 1.54
CDC42-204ENST00000411827 ZNF772Q68DY9 489 aaPredicted RBP24.7■■□□□ 1.54
CDC42-204ENST00000411827 HMOX1P09601 288 aa24.69■■□□□ 1.54
CDC42-204ENST00000411827 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.69■■□□□ 1.54
CDC42-204ENST00000411827 SPATA31A5Q5VU36 1347 aa24.68■■□□□ 1.54
CDC42-204ENST00000411827 SPATA31A7Q8IWB4 1347 aa24.68■■□□□ 1.54
CDC42-204ENST00000411827 PRKAR2BP31323 418 aa24.68■■□□□ 1.54
CDC42-204ENST00000411827 AMOTQ4VCS5 1084 aa24.68■■□□□ 1.54
CDC42-204ENST00000411827 TCP11L2Q8N4U5 519 aa24.68■■□□□ 1.54
CDC42-204ENST00000411827 TRPC5Q9UL62 973 aaPredicted RBP24.68■■□□□ 1.54
CDC42-204ENST00000411827 SPATA31A1Q5TZJ5 1347 aa24.67■■□□□ 1.54
CDC42-204ENST00000411827 PLEKHF1Q96S99 279 aa24.67■■□□□ 1.54
CDC42-204ENST00000411827 TATP17735 454 aaPredicted RBP24.66■■□□□ 1.54
CDC42-204ENST00000411827 BARGINQ6ZT62 677 aa24.66■■□□□ 1.54
CDC42-204ENST00000411827 IL2RBP14784 551 aa24.65■■□□□ 1.54
CDC42-204ENST00000411827 AEBP1Q8IUX7 1158 aa24.65■■□□□ 1.54
CDC42-204ENST00000411827 PLEKHO1Q53GL0 409 aaPredicted RBP24.64■■□□□ 1.54
CDC42-204ENST00000411827 CCDC9Q9Y3X0 531 aaKnown RBP24.64■■□□□ 1.54
CDC42-204ENST00000411827 USHBP1Q8N6Y0 703 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms