RNA–Protein interactions for RNA: ENST00000411409.1

RN7SKP3-201, Transcript of RNA, 7SK small nuclear pseudogene 3, humanhuman

BASIC

Gene RN7SKP3, Length 358 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP3-201ENST00000411409 MORC1Q86VD1 984 aa12.86□□□□□ -0.35
RN7SKP3-201ENST00000411409 ARHGEF25Q86VW2 580 aa12.86□□□□□ -0.35
RN7SKP3-201ENST00000411409 FNBP4Q8N3X1 1017 aaPredicted RBP12.86□□□□□ -0.35
RN7SKP3-201ENST00000411409 GGNBP2Q9H3C7 697 aa12.86□□□□□ -0.35
RN7SKP3-201ENST00000411409 PHRF1Q9P1Y6 1649 aaKnown RBP12.86□□□□□ -0.35
RN7SKP3-201ENST00000411409 NFAT5O94916 1531 aa12.85□□□□□ -0.35
RN7SKP3-201ENST00000411409 ABCA3Q99758 1704 aa12.85□□□□□ -0.35
RN7SKP3-201ENST00000411409 NUTM2GQ5VZR2 741 aa12.84□□□□□ -0.35
RN7SKP3-201ENST00000411409 PRDM11Q9NQV5 511 aa12.84□□□□□ -0.35
RN7SKP3-201ENST00000411409 MARF1Q9Y4F3 1742 aaKnown RBP12.84□□□□□ -0.35
RN7SKP3-201ENST00000411409 COL14A1Q05707 1796 aaKnown RBP12.84□□□□□ -0.35
RN7SKP3-201ENST00000411409 KIAA0232Q92628 1395 aa12.83□□□□□ -0.36
RN7SKP3-201ENST00000411409 BLMP54132 1417 aaPredicted RBP12.83□□□□□ -0.36
RN7SKP3-201ENST00000411409 CABLES1Q8TDN4 633 aa12.83□□□□□ -0.36
RN7SKP3-201ENST00000411409 SLIT2O94813 1529 aa12.83□□□□□ -0.36
RN7SKP3-201ENST00000411409 FAM83GA6ND36 823 aa12.82□□□□□ -0.36
RN7SKP3-201ENST00000411409 CAPN15O75808 1086 aa12.82□□□□□ -0.36
RN7SKP3-201ENST00000411409 IP6K1Q92551 441 aa12.82□□□□□ -0.36
RN7SKP3-201ENST00000411409 NWD2Q9ULI1 1742 aa12.82□□□□□ -0.36
RN7SKP3-201ENST00000411409 SMG6Q86US8 1419 aaKnown RBP12.81□□□□□ -0.36
RN7SKP3-201ENST00000411409 ZRANB1Q9UGI0 708 aa12.81□□□□□ -0.36
RN7SKP3-201ENST00000411409 USP21Q9UK80 565 aa12.81□□□□□ -0.36
RN7SKP3-201ENST00000411409 INSRP06213 1382 aa12.81□□□□□ -0.36
RN7SKP3-201ENST00000411409 FLT4P35916 1363 aa12.81□□□□□ -0.36
RN7SKP3-201ENST00000411409 PARD3Q8TEW0 1356 aa12.81□□□□□ -0.36
RN7SKP3-201ENST00000411409 AMPHP49418 695 aa12.8□□□□□ -0.36
RN7SKP3-201ENST00000411409 ZC3H6P61129 1189 aaKnown RBP12.8□□□□□ -0.36
RN7SKP3-201ENST00000411409 UNC5CLQ8IV45 518 aa12.8□□□□□ -0.36
RN7SKP3-201ENST00000411409 TRPC5Q9UL62 973 aaPredicted RBP12.8□□□□□ -0.36
RN7SKP3-201ENST00000411409 MAP3K19Q56UN5 1328 aa12.8□□□□□ -0.36
RN7SKP3-201ENST00000411409 MKRN4PQ13434 485 aaPredicted RBP12.79□□□□□ -0.36
RN7SKP3-201ENST00000411409 CC2D1BQ5T0F9 858 aaKnown RBP12.79□□□□□ -0.36
RN7SKP3-201ENST00000411409 POLKQ9UBT6 870 aa12.79□□□□□ -0.36
RN7SKP3-201ENST00000411409 RGS12O14924 1447 aa12.79□□□□□ -0.36
RN7SKP3-201ENST00000411409 HOXC9P31274 260 aa12.78□□□□□ -0.36
RN7SKP3-201ENST00000411409 BTG4Q9NY30 223 aa12.78□□□□□ -0.36
RN7SKP3-201ENST00000411409 THRAP3Q9Y2W1 955 aaKnown RBP12.78□□□□□ -0.36
RN7SKP3-201ENST00000411409 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.78□□□□□ -0.36
RN7SKP3-201ENST00000411409 PLEKHG2Q9H7P9 1386 aa12.78□□□□□ -0.36
RN7SKP3-201ENST00000411409 LMO7Q8WWI1 1683 aa12.77□□□□□ -0.36
RN7SKP3-201ENST00000411409 EVA1CP58658 441 aa12.77□□□□□ -0.37
RN7SKP3-201ENST00000411409 VPS72Q15906 364 aa12.77□□□□□ -0.37
RN7SKP3-201ENST00000411409 BCL9LQ86UU0 1499 aa12.77□□□□□ -0.37
RN7SKP3-201ENST00000411409 COL18A1P39060 1754 aa12.76□□□□□ -0.37
RN7SKP3-201ENST00000411409 ANP32CO43423 234 aa12.76□□□□□ -0.37
RN7SKP3-201ENST00000411409 POLA2Q14181 598 aa12.76□□□□□ -0.37
RN7SKP3-201ENST00000411409 CFAP53Q96M91 514 aa12.76□□□□□ -0.37
RN7SKP3-201ENST00000411409 PRKRIP1Q9H875 184 aaPredicted RBP12.76□□□□□ -0.37
RN7SKP3-201ENST00000411409 ERBB3P21860 1342 aa12.76□□□□□ -0.37
RN7SKP3-201ENST00000411409 WDR17Q8IZU2 1322 aa12.76□□□□□ -0.37
RN7SKP3-201ENST00000411409 LTN1O94822 1766 aa12.75□□□□□ -0.37
RN7SKP3-201ENST00000411409 COL5A2P05997 1499 aaPredicted RBP12.75□□□□□ -0.37
RN7SKP3-201ENST00000411409 MAP2P11137 1827 aaKnown RBP12.75□□□□□ -0.37
RN7SKP3-201ENST00000411409 MYBBP1AQ9BQG0 1328 aaKnown RBP12.75□□□□□ -0.37
RN7SKP3-201ENST00000411409 CDCA7Q9BWT1 371 aaPredicted RBP12.75□□□□□ -0.37
RN7SKP3-201ENST00000411409 CAMTA1Q9Y6Y1 1673 aa12.74□□□□□ -0.37
RN7SKP3-201ENST00000411409 ATRNO75882 1429 aa12.74□□□□□ -0.37
RN7SKP3-201ENST00000411409 CRB1P82279 1406 aa12.74□□□□□ -0.37
RN7SKP3-201ENST00000411409 SOX12O15370 315 aa12.74□□□□□ -0.37
RN7SKP3-201ENST00000411409 PPP2R1AP30153 589 aa12.74□□□□□ -0.37
RN7SKP3-201ENST00000411409 MTHFSP49914 203 aa12.74□□□□□ -0.37
RN7SKP3-201ENST00000411409 RRS1Q15050 365 aaKnown RBP12.74□□□□□ -0.37
RN7SKP3-201ENST00000411409 CHRNA2Q15822 529 aa12.74□□□□□ -0.37
RN7SKP3-201ENST00000411409 CARD10Q9BWT7 1032 aa12.74□□□□□ -0.37
RN7SKP3-201ENST00000411409 PLCH1Q4KWH8 1693 aa12.73□□□□□ -0.37
RN7SKP3-201ENST00000411409 FAM208AQ9UK61 1670 aaKnown RBP12.73□□□□□ -0.37
RN7SKP3-201ENST00000411409 BARGINQ6ZT62 677 aa12.73□□□□□ -0.37
RN7SKP3-201ENST00000411409 AXIN2Q9Y2T1 843 aa12.73□□□□□ -0.37
RN7SKP3-201ENST00000411409 EMILIN1Q9Y6C2 1016 aa12.73□□□□□ -0.37
RN7SKP3-201ENST00000411409 SPATA31A5Q5VU36 1347 aa12.72□□□□□ -0.37
RN7SKP3-201ENST00000411409 SPATA31A7Q8IWB4 1347 aa12.72□□□□□ -0.37
RN7SKP3-201ENST00000411409 ONECUT3O60422 494 aaPredicted RBP12.72□□□□□ -0.37
RN7SKP3-201ENST00000411409 PLEKHG5O94827 1062 aa12.72□□□□□ -0.37
RN7SKP3-201ENST00000411409 TNNT2P45379 298 aaPredicted RBP12.72□□□□□ -0.37
RN7SKP3-201ENST00000411409 ANKRD24Q8TF21 1146 aa12.72□□□□□ -0.37
RN7SKP3-201ENST00000411409 GJD4Q96KN9 370 aaPredicted RBP12.72□□□□□ -0.37
RN7SKP3-201ENST00000411409 NUDCQ9Y266 331 aa12.72□□□□□ -0.37
RN7SKP3-201ENST00000411409 NRAPQ86VF7 1730 aa12.71□□□□□ -0.37
RN7SKP3-201ENST00000411409 CSB-PGBD3P0DP91 1061 aa12.71□□□□□ -0.37
RN7SKP3-201ENST00000411409 HSP90AB2PQ58FF8 381 aa12.71□□□□□ -0.37
RN7SKP3-201ENST00000411409 SPATA31A1Q5TZJ5 1347 aa12.7□□□□□ -0.38
RN7SKP3-201ENST00000411409 ZBTB7CA1YPR0 619 aa12.7□□□□□ -0.38
RN7SKP3-201ENST00000411409 PPM1GO15355 546 aaPredicted RBP12.7□□□□□ -0.38
RN7SKP3-201ENST00000411409 DIAPH1O60610 1272 aaKnown RBP12.7□□□□□ -0.38
RN7SKP3-201ENST00000411409 TOM1L2Q6ZVM7 507 aa12.7□□□□□ -0.38
RN7SKP3-201ENST00000411409 CCDC125Q86Z20 511 aa12.7□□□□□ -0.38
RN7SKP3-201ENST00000411409 TCP11L2Q8N4U5 519 aa12.7□□□□□ -0.38
RN7SKP3-201ENST00000411409 FBLN1P23142 703 aa12.69□□□□□ -0.38
RN7SKP3-201ENST00000411409 STRN4Q9NRL3 753 aa12.69□□□□□ -0.38
RN7SKP3-201ENST00000411409 NCAPD2Q15021 1401 aa12.69□□□□□ -0.38
RN7SKP3-201ENST00000411409 PEAK1Q9H792 1746 aa12.68□□□□□ -0.38
RN7SKP3-201ENST00000411409 IL13P35225 146 aa12.68□□□□□ -0.38
RN7SKP3-201ENST00000411409 EIF4A2Q14240 407 aaKnown RBP12.68□□□□□ -0.38
RN7SKP3-201ENST00000411409 LARP1Q6PKG0 1096 aaKnown RBP12.68□□□□□ -0.38
RN7SKP3-201ENST00000411409 PNNQ9H307 717 aaKnown RBP12.68□□□□□ -0.38
RN7SKP3-201ENST00000411409 IGSF1Q8N6C5 1336 aa12.67□□□□□ -0.38
RN7SKP3-201ENST00000411409 DIEXFQ68CQ4 756 aaKnown RBP12.67□□□□□ -0.38
RN7SKP3-201ENST00000411409 NLRP2Q9NX02 1062 aa12.67□□□□□ -0.38
RN7SKP3-201ENST00000411409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.67□□□□□ -0.38
RN7SKP3-201ENST00000411409 CCDC9Q9Y3X0 531 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms