RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 MEIOBQ8N635 442 aa4.28□□□□□ -1.72
RNU2-55P-201ENST00000411146 PPP1R26Q5T8A7 1209 aaPredicted RBP4.27□□□□□ -1.73
RNU2-55P-201ENST00000411146 HMX1Q9NP08 348 aaPredicted RBP4.27□□□□□ -1.73
RNU2-55P-201ENST00000411146 TMPRSS4Q9NRS4 437 aa4.27□□□□□ -1.73
RNU2-55P-201ENST00000411146 ADD1P35611 737 aaKnown RBP4.26□□□□□ -1.73
RNU2-55P-201ENST00000411146 TRMT44Q8IYL2 757 aaKnown RBP4.26□□□□□ -1.73
RNU2-55P-201ENST00000411146 CCDC116Q8IYX3 515 aa4.26□□□□□ -1.73
RNU2-55P-201ENST00000411146 KDF1Q8NAX2 398 aaPredicted RBP4.26□□□□□ -1.73
RNU2-55P-201ENST00000411146 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.26□□□□□ -1.73
RNU2-55P-201ENST00000411146 KDM4CQ9H3R0 1056 aa4.26□□□□□ -1.73
RNU2-55P-201ENST00000411146 CTSOP43234 321 aaPredicted RBP4.25□□□□□ -1.73
RNU2-55P-201ENST00000411146 PTSQ03393 145 aa4.25□□□□□ -1.73
RNU2-55P-201ENST00000411146 SKIV2LQ15477 1246 aaKnown RBP4.25□□□□□ -1.73
RNU2-55P-201ENST00000411146 RNFT1Q5M7Z0 435 aa4.25□□□□□ -1.73
RNU2-55P-201ENST00000411146 HELBQ8NG08 1087 aaPredicted RBP4.25□□□□□ -1.73
RNU2-55P-201ENST00000411146 WHAMMQ8TF30 809 aa4.25□□□□□ -1.73
RNU2-55P-201ENST00000411146 KCTD15Q96SI1 283 aaPredicted RBP4.25□□□□□ -1.73
RNU2-55P-201ENST00000411146 ZNF395Q9H8N7 513 aaPredicted RBP4.25□□□□□ -1.73
RNU2-55P-201ENST00000411146 TTLL8A6PVC2 850 aa4.24□□□□□ -1.73
RNU2-55P-201ENST00000411146 AP1G2O75843 785 aa4.24□□□□□ -1.73
RNU2-55P-201ENST00000411146 RAB15P59190 212 aa4.24□□□□□ -1.73
RNU2-55P-201ENST00000411146 RELBQ01201 579 aa4.24□□□□□ -1.73
RNU2-55P-201ENST00000411146 INTS6LQ5JSJ4 861 aaKnown RBP4.24□□□□□ -1.73
RNU2-55P-201ENST00000411146 PDXDC2PQ6P474 469 aa4.24□□□□□ -1.73
RNU2-55P-201ENST00000411146 Q6ZVU0 165 aa4.24□□□□□ -1.73
RNU2-55P-201ENST00000411146 ARMC2Q8NEN0 867 aa4.24□□□□□ -1.73
RNU2-55P-201ENST00000411146 CNTNAP3BQ96NU0 1288 aa4.24□□□□□ -1.73
RNU2-55P-201ENST00000411146 INSM2Q96T92 566 aaPredicted RBP4.24□□□□□ -1.73
RNU2-55P-201ENST00000411146 ARHGAP9Q9BRR9 750 aa4.24□□□□□ -1.73
RNU2-55P-201ENST00000411146 CNTNAP3Q9BZ76 1288 aa4.24□□□□□ -1.73
RNU2-55P-201ENST00000411146 FKBPLQ9UIM3 349 aa4.24□□□□□ -1.73
RNU2-55P-201ENST00000411146 MAP4K5Q9Y4K4 846 aa4.24□□□□□ -1.73
RNU2-55P-201ENST00000411146 NBPF14Q5TI25 921 aa4.23□□□□□ -1.73
RNU2-55P-201ENST00000411146 VWA5B2Q8N398 1253 aa4.23□□□□□ -1.73
RNU2-55P-201ENST00000411146 ADAM32Q8TC27 787 aa4.23□□□□□ -1.73
RNU2-55P-201ENST00000411146 TSEN34Q9BSV6 310 aaKnown RBP4.23□□□□□ -1.73
RNU2-55P-201ENST00000411146 RSPH6AQ9H0K4 717 aa4.23□□□□□ -1.73
RNU2-55P-201ENST00000411146 CUEDC1Q9NWM3 386 aaPredicted RBP4.23□□□□□ -1.73
RNU2-55P-201ENST00000411146 EMILIN1Q9Y6C2 1016 aa4.23□□□□□ -1.73
RNU2-55P-201ENST00000411146 SENP3-EIF4A1A0A087X0R7 540 aa4.22□□□□□ -1.73
RNU2-55P-201ENST00000411146 SPINT1O43278 529 aa4.22□□□□□ -1.73
RNU2-55P-201ENST00000411146 LILRA1O75019 489 aa4.22□□□□□ -1.73
RNU2-55P-201ENST00000411146 KCNMA1Q12791 1236 aa4.22□□□□□ -1.73
RNU2-55P-201ENST00000411146 PPP2R2DQ66LE6 453 aa4.22□□□□□ -1.73
RNU2-55P-201ENST00000411146 CCDC155Q8N6L0 562 aa4.22□□□□□ -1.73
RNU2-55P-201ENST00000411146 TRIM34Q9BYJ4 488 aa4.22□□□□□ -1.73
RNU2-55P-201ENST00000411146 ATP1B4Q9UN42 357 aaPredicted RBP4.22□□□□□ -1.73
RNU2-55P-201ENST00000411146 SLC35F4A4IF30 521 aa4.21□□□□□ -1.74
RNU2-55P-201ENST00000411146 ERVH48-1M5A8F1 160 aa4.21□□□□□ -1.74
RNU2-55P-201ENST00000411146 UPP2O95045 317 aa4.21□□□□□ -1.74
RNU2-55P-201ENST00000411146 SUZ12Q15022 739 aaKnown RBP4.21□□□□□ -1.74
RNU2-55P-201ENST00000411146 SH3D19Q5HYK7 790 aa4.21□□□□□ -1.74
RNU2-55P-201ENST00000411146 ZBTB33Q86T24 672 aa4.21□□□□□ -1.74
RNU2-55P-201ENST00000411146 ZNF784Q8NCA9 323 aaPredicted RBP4.21□□□□□ -1.74
RNU2-55P-201ENST00000411146 COL25A1Q9BXS0 654 aaPredicted RBP4.21□□□□□ -1.74
RNU2-55P-201ENST00000411146 USP17L8P0C7I0 530 aa4.2□□□□□ -1.74
RNU2-55P-201ENST00000411146 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.2□□□□□ -1.74
RNU2-55P-201ENST00000411146 FOXD4L5Q5VV16 416 aaPredicted RBP4.2□□□□□ -1.74
RNU2-55P-201ENST00000411146 KCTD17Q8N5Z5 321 aa4.2□□□□□ -1.74
RNU2-55P-201ENST00000411146 ADAMTS8Q9UP79 889 aa4.2□□□□□ -1.74
RNU2-55P-201ENST00000411146 RHOQP17081 205 aa4.19□□□□□ -1.74
RNU2-55P-201ENST00000411146 RFC5P40937 340 aa4.19□□□□□ -1.74
RNU2-55P-201ENST00000411146 ZNF385CQ66K41 422 aaPredicted RBP4.19□□□□□ -1.74
RNU2-55P-201ENST00000411146 RNF217Q8TC41 542 aa4.19□□□□□ -1.74
RNU2-55P-201ENST00000411146 NANOS1Q8WY41 292 aaKnown RBP4.19□□□□□ -1.74
RNU2-55P-201ENST00000411146 GPKOWQ92917 476 aaPredicted RBP eCLIP4.19□□□□□ -1.74
RNU2-55P-201ENST00000411146 SLC10A4Q96EP9 437 aa4.19□□□□□ -1.74
RNU2-55P-201ENST00000411146 CDC14CA4D256 554 aa4.18□□□□□ -1.74
RNU2-55P-201ENST00000411146 GIGYF1O75420 1035 aaPredicted RBP4.18□□□□□ -1.74
RNU2-55P-201ENST00000411146 ITGA6P23229 1130 aa4.18□□□□□ -1.74
RNU2-55P-201ENST00000411146 PTK2Q05397 1052 aa4.18□□□□□ -1.74
RNU2-55P-201ENST00000411146 IL27Q8NEV9 243 aa4.18□□□□□ -1.74
RNU2-55P-201ENST00000411146 POLMQ9NP87 494 aaPredicted RBP4.18□□□□□ -1.74
RNU2-55P-201ENST00000411146 CYLDQ9NQC7 956 aa4.18□□□□□ -1.74
RNU2-55P-201ENST00000411146 PGPEP1Q9NXJ5 209 aa4.18□□□□□ -1.74
RNU2-55P-201ENST00000411146 ESPNB1AK53 854 aa4.17□□□□□ -1.74
RNU2-55P-201ENST00000411146 PTGIRP43119 386 aa4.17□□□□□ -1.74
RNU2-55P-201ENST00000411146 RASSF7Q02833 373 aa4.17□□□□□ -1.74
RNU2-55P-201ENST00000411146 GAS6Q14393 721 aa4.17□□□□□ -1.74
RNU2-55P-201ENST00000411146 PRICKLE2Q7Z3G6 844 aa4.17□□□□□ -1.74
RNU2-55P-201ENST00000411146 GJD4Q96KN9 370 aaPredicted RBP4.17□□□□□ -1.74
RNU2-55P-201ENST00000411146 GPR37L1O60883 481 aa4.16□□□□□ -1.74
RNU2-55P-201ENST00000411146 ARHGEF15O94989 841 aa4.16□□□□□ -1.74
RNU2-55P-201ENST00000411146 GDF11O95390 407 aa4.16□□□□□ -1.74
RNU2-55P-201ENST00000411146 ADH1AP07327 375 aa4.16□□□□□ -1.74
RNU2-55P-201ENST00000411146 FBXO45P0C2W1 286 aa4.16□□□□□ -1.74
RNU2-55P-201ENST00000411146 LYPD4Q6UWN0 246 aa4.16□□□□□ -1.74
RNU2-55P-201ENST00000411146 DZIP3Q86Y13 1208 aaKnown RBP4.16□□□□□ -1.74
RNU2-55P-201ENST00000411146 TMEM151AQ8N4L1 468 aa4.16□□□□□ -1.74
RNU2-55P-201ENST00000411146 DDRGK1Q96HY6 314 aa4.16□□□□□ -1.74
RNU2-55P-201ENST00000411146 GPR25O00155 361 aa4.15□□□□□ -1.75
RNU2-55P-201ENST00000411146 SLURP2P0DP57 97 aa4.15□□□□□ -1.75
RNU2-55P-201ENST00000411146 SCTRP47872 440 aa4.15□□□□□ -1.75
RNU2-55P-201ENST00000411146 DHX9Q08211 1270 aaKnown RBP4.14□□□□□ -1.75
RNU2-55P-201ENST00000411146 POU4F2Q12837 409 aa4.14□□□□□ -1.75
RNU2-55P-201ENST00000411146 DBN1Q16643 649 aa4.14□□□□□ -1.75
RNU2-55P-201ENST00000411146 TSGA10IPQ3SY00 556 aa4.14□□□□□ -1.75
RNU2-55P-201ENST00000411146 SV2AQ7L0J3 742 aa4.14□□□□□ -1.75
RNU2-55P-201ENST00000411146 GPSM3Q9Y4H4 160 aa4.14□□□□□ -1.75
RNU2-55P-201ENST00000411146 ZC3H4Q9UPT8 1303 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms