RNA–Protein interactions for RNA: ENST00000410704.1

RN7SKP54-201, Transcript of RNA, 7SK small nuclear pseudogene 54, humanhuman

BASIC

Gene RN7SKP54, Length 269 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP54-201ENST00000410704 ABCC6O95255 1503 aa13.54□□□□□ -0.24
RN7SKP54-201ENST00000410704 CHRNA2Q15822 529 aa13.54□□□□□ -0.24
RN7SKP54-201ENST00000410704 MEX3CQ5U5Q3 659 aaKnown RBP13.54□□□□□ -0.24
RN7SKP54-201ENST00000410704 BLMP54132 1417 aaPredicted RBP13.54□□□□□ -0.24
RN7SKP54-201ENST00000410704 DIAPH1O60610 1272 aaKnown RBP13.53□□□□□ -0.24
RN7SKP54-201ENST00000410704 NUDCQ9Y266 331 aa13.53□□□□□ -0.24
RN7SKP54-201ENST00000410704 INSRP06213 1382 aa13.53□□□□□ -0.24
RN7SKP54-201ENST00000410704 PEAK1Q9H792 1746 aa13.53□□□□□ -0.24
RN7SKP54-201ENST00000410704 FAM83GA6ND36 823 aa13.52□□□□□ -0.25
RN7SKP54-201ENST00000410704 HSP90AB2PQ58FF8 381 aa13.52□□□□□ -0.25
RN7SKP54-201ENST00000410704 COL14A1Q05707 1796 aaKnown RBP13.52□□□□□ -0.25
RN7SKP54-201ENST00000410704 WDR43Q15061 677 aaKnown RBP eCLIP13.51□□□□□ -0.25
RN7SKP54-201ENST00000410704 LTV1Q96GA3 475 aaPredicted RBP13.51□□□□□ -0.25
RN7SKP54-201ENST00000410704 EVA1CP58658 441 aa13.5□□□□□ -0.25
RN7SKP54-201ENST00000410704 EIF4A2Q14240 407 aaKnown RBP13.5□□□□□ -0.25
RN7SKP54-201ENST00000410704 CCDC184Q52MB2 194 aa13.5□□□□□ -0.25
RN7SKP54-201ENST00000410704 ANKRD24Q8TF21 1146 aa13.5□□□□□ -0.25
RN7SKP54-201ENST00000410704 NGLY1Q96IV0 654 aa13.5□□□□□ -0.25
RN7SKP54-201ENST00000410704 AXIN2Q9Y2T1 843 aa13.5□□□□□ -0.25
RN7SKP54-201ENST00000410704 LRP6O75581 1613 aa13.5□□□□□ -0.25
RN7SKP54-201ENST00000410704 COL3A1P02461 1466 aaPredicted RBP13.49□□□□□ -0.25
RN7SKP54-201ENST00000410704 CSB-PGBD3P0DP91 1061 aa13.49□□□□□ -0.25
RN7SKP54-201ENST00000410704 C8orf37Q96NL8 207 aa13.49□□□□□ -0.25
RN7SKP54-201ENST00000410704 BTG4Q9NY30 223 aa13.49□□□□□ -0.25
RN7SKP54-201ENST00000410704 COL18A1P39060 1754 aa13.49□□□□□ -0.25
RN7SKP54-201ENST00000410704 LMO7Q8WWI1 1683 aa13.48□□□□□ -0.25
RN7SKP54-201ENST00000410704 U2SURPO15042 1029 aaKnown RBP13.48□□□□□ -0.25
RN7SKP54-201ENST00000410704 IL13P35225 146 aa13.48□□□□□ -0.25
RN7SKP54-201ENST00000410704 CAMTA1Q9Y6Y1 1673 aa13.47□□□□□ -0.25
RN7SKP54-201ENST00000410704 ERBB3P21860 1342 aa13.47□□□□□ -0.25
RN7SKP54-201ENST00000410704 STRN4Q9NRL3 753 aa13.47□□□□□ -0.25
RN7SKP54-201ENST00000410704 COL5A2P05997 1499 aaPredicted RBP13.47□□□□□ -0.25
RN7SKP54-201ENST00000410704 U2AF1L5P0DN76 240 aaPredicted RBP13.46□□□□□ -0.25
RN7SKP54-201ENST00000410704 U2AF1Q01081 240 aaKnown RBP eCLIP13.46□□□□□ -0.25
RN7SKP54-201ENST00000410704 PNISRQ8TF01 805 aaKnown RBP13.46□□□□□ -0.25
RN7SKP54-201ENST00000410704 PLCH1Q4KWH8 1693 aa13.46□□□□□ -0.26
RN7SKP54-201ENST00000410704 RGPD5Q99666 1765 aa13.45□□□□□ -0.26
RN7SKP54-201ENST00000410704 WDR17Q8IZU2 1322 aa13.45□□□□□ -0.26
RN7SKP54-201ENST00000410704 TOM1L2Q6ZVM7 507 aa13.45□□□□□ -0.26
RN7SKP54-201ENST00000410704 FAM9BQ8IZU0 186 aa13.45□□□□□ -0.26
RN7SKP54-201ENST00000410704 NLRP2Q9NX02 1062 aa13.45□□□□□ -0.26
RN7SKP54-201ENST00000410704 NWD2Q9ULI1 1742 aa13.44□□□□□ -0.26
RN7SKP54-201ENST00000410704 SLIT2O94813 1529 aa13.44□□□□□ -0.26
RN7SKP54-201ENST00000410704 FAM208AQ9UK61 1670 aaKnown RBP13.44□□□□□ -0.26
RN7SKP54-201ENST00000410704 UNC5CLQ8IV45 518 aa13.44□□□□□ -0.26
RN7SKP54-201ENST00000410704 FNBP4Q8N3X1 1017 aaPredicted RBP13.44□□□□□ -0.26
RN7SKP54-201ENST00000410704 EYA1Q99502 592 aa13.44□□□□□ -0.26
RN7SKP54-201ENST00000410704 PNNQ9H307 717 aaKnown RBP13.44□□□□□ -0.26
RN7SKP54-201ENST00000410704 IGSF1Q8N6C5 1336 aa13.43□□□□□ -0.26
RN7SKP54-201ENST00000410704 ILDR1Q86SU0 546 aaPredicted RBP13.43□□□□□ -0.26
RN7SKP54-201ENST00000410704 USP21Q9UK80 565 aa13.43□□□□□ -0.26
RN7SKP54-201ENST00000410704 AFF2P51816 1311 aa13.42□□□□□ -0.26
RN7SKP54-201ENST00000410704 CRB1P82279 1406 aa13.42□□□□□ -0.26
RN7SKP54-201ENST00000410704 NEFMP07197 916 aa13.42□□□□□ -0.26
RN7SKP54-201ENST00000410704 NBPF6Q5VWK0 638 aa13.42□□□□□ -0.26
RN7SKP54-201ENST00000410704 SULT6B1Q6IMI4 303 aa13.42□□□□□ -0.26
RN7SKP54-201ENST00000410704 LARP1Q6PKG0 1096 aaKnown RBP13.42□□□□□ -0.26
RN7SKP54-201ENST00000410704 NBPF4Q96M43 638 aa13.42□□□□□ -0.26
RN7SKP54-201ENST00000410704 ADAMTS8Q9UP79 889 aa13.42□□□□□ -0.26
RN7SKP54-201ENST00000410704 CCDC9Q9Y3X0 531 aaKnown RBP13.42□□□□□ -0.26
RN7SKP54-201ENST00000410704 FCHSD2O94868 740 aa13.41□□□□□ -0.26
RN7SKP54-201ENST00000410704 HMOX1P09601 288 aa13.41□□□□□ -0.26
RN7SKP54-201ENST00000410704 CARD10Q9BWT7 1032 aa13.41□□□□□ -0.26
RN7SKP54-201ENST00000410704 RGPD1P0DJD0 1748 aa13.41□□□□□ -0.26
RN7SKP54-201ENST00000410704 NRAPQ86VF7 1730 aa13.41□□□□□ -0.26
RN7SKP54-201ENST00000410704 USHBP1Q8N6Y0 703 aa13.4□□□□□ -0.26
RN7SKP54-201ENST00000410704 BCL9LQ86UU0 1499 aa13.4□□□□□ -0.26
RN7SKP54-201ENST00000410704 VPS72Q15906 364 aa13.39□□□□□ -0.27
RN7SKP54-201ENST00000410704 AEBP1Q8IUX7 1158 aa13.39□□□□□ -0.27
RN7SKP54-201ENST00000410704 RAPGEF4Q8WZA2 1011 aa13.39□□□□□ -0.27
RN7SKP54-201ENST00000410704 RSPH6AQ9H0K4 717 aa13.39□□□□□ -0.27
RN7SKP54-201ENST00000410704 USP35Q9P2H5 1018 aa13.39□□□□□ -0.27
RN7SKP54-201ENST00000410704 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.39□□□□□ -0.27
RN7SKP54-201ENST00000410704 MAPK8IP3Q9UPT6 1336 aa13.39□□□□□ -0.27
RN7SKP54-201ENST00000410704 KDRP35968 1356 aa13.38□□□□□ -0.27
RN7SKP54-201ENST00000410704 PRKAR2BP31323 418 aa13.38□□□□□ -0.27
RN7SKP54-201ENST00000410704 ZNF772Q68DY9 489 aaPredicted RBP13.38□□□□□ -0.27
RN7SKP54-201ENST00000410704 TCP11L2Q8N4U5 519 aa13.38□□□□□ -0.27
RN7SKP54-201ENST00000410704 RUNDC1Q96C34 613 aa13.38□□□□□ -0.27
RN7SKP54-201ENST00000410704 TRPC5Q9UL62 973 aaPredicted RBP13.38□□□□□ -0.27
RN7SKP54-201ENST00000410704 NCAPD2Q15021 1401 aa13.38□□□□□ -0.27
RN7SKP54-201ENST00000410704 SPATA31A1Q5TZJ5 1347 aa13.38□□□□□ -0.27
RN7SKP54-201ENST00000410704 SPATA31A5Q5VU36 1347 aa13.38□□□□□ -0.27
RN7SKP54-201ENST00000410704 SPATA31A7Q8IWB4 1347 aa13.38□□□□□ -0.27
RN7SKP54-201ENST00000410704 RGPD2P0DJD1 1756 aa13.37□□□□□ -0.27
RN7SKP54-201ENST00000410704 TATP17735 454 aaPredicted RBP13.37□□□□□ -0.27
RN7SKP54-201ENST00000410704 CCDC146Q8IYE0 955 aa13.37□□□□□ -0.27
RN7SKP54-201ENST00000410704 PHF23Q9BUL5 403 aaPredicted RBP13.37□□□□□ -0.27
RN7SKP54-201ENST00000410704 THRAP3Q9Y2W1 955 aaKnown RBP13.37□□□□□ -0.27
RN7SKP54-201ENST00000410704 IL2RBP14784 551 aa13.35□□□□□ -0.27
RN7SKP54-201ENST00000410704 CDCA7Q9BWT1 371 aaPredicted RBP13.35□□□□□ -0.27
RN7SKP54-201ENST00000410704 QTRT2Q9H974 415 aaKnown RBP13.35□□□□□ -0.27
RN7SKP54-201ENST00000410704 ATRNO75882 1429 aa13.35□□□□□ -0.27
RN7SKP54-201ENST00000410704 PLEKHO1Q53GL0 409 aaPredicted RBP13.34□□□□□ -0.27
RN7SKP54-201ENST00000410704 GJD4Q96KN9 370 aaPredicted RBP13.34□□□□□ -0.27
RN7SKP54-201ENST00000410704 PLEKHF1Q96S99 279 aa13.34□□□□□ -0.27
RN7SKP54-201ENST00000410704 PLEKHG2Q9H7P9 1386 aa13.33□□□□□ -0.27
RN7SKP54-201ENST00000410704 AMOTQ4VCS5 1084 aa13.33□□□□□ -0.28
RN7SKP54-201ENST00000410704 BARGINQ6ZT62 677 aa13.33□□□□□ -0.28
RN7SKP54-201ENST00000410704 SPG7Q9UQ90 795 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms