RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 AXIN2Q9Y2T1 843 aa32.8■■■□□ 2.84
UBE2E3-202ENST00000410062 COL5A2P05997 1499 aaPredicted RBP32.78■■■□□ 2.84
UBE2E3-202ENST00000410062 RGPD5Q99666 1765 aa32.77■■■□□ 2.84
UBE2E3-202ENST00000410062 CDK12Q9NYV4 1490 aaPredicted RBP32.76■■■□□ 2.83
UBE2E3-202ENST00000410062 RGS12O14924 1447 aa32.75■■■□□ 2.83
UBE2E3-202ENST00000410062 LARP1Q6PKG0 1096 aaKnown RBP32.75■■■□□ 2.83
UBE2E3-202ENST00000410062 KNSTRNQ9Y448 316 aa32.75■■■□□ 2.83
UBE2E3-202ENST00000410062 SPATA31A5Q5VU36 1347 aa32.74■■■□□ 2.83
UBE2E3-202ENST00000410062 SPATA31A7Q8IWB4 1347 aa32.74■■■□□ 2.83
UBE2E3-202ENST00000410062 MAP3K19Q56UN5 1328 aa32.72■■■□□ 2.83
UBE2E3-202ENST00000410062 RRS1Q15050 365 aaKnown RBP32.71■■■□□ 2.83
UBE2E3-202ENST00000410062 ABCC6O95255 1503 aa32.71■■■□□ 2.83
UBE2E3-202ENST00000410062 ANKRD26Q9UPS8 1709 aa32.71■■■□□ 2.83
UBE2E3-202ENST00000410062 USP35Q9P2H5 1018 aa32.7■■■□□ 2.82
UBE2E3-202ENST00000410062 SPATA31A1Q5TZJ5 1347 aa32.69■■■□□ 2.82
UBE2E3-202ENST00000410062 PER1O15534 1290 aaPredicted RBP32.69■■■□□ 2.82
UBE2E3-202ENST00000410062 FAM98CQ17RN3 349 aaKnown RBP32.67■■■□□ 2.82
UBE2E3-202ENST00000410062 NSD2O96028 1365 aa32.67■■■□□ 2.82
UBE2E3-202ENST00000410062 AMPHP49418 695 aa32.66■■■□□ 2.82
UBE2E3-202ENST00000410062 IP6K1Q92551 441 aa32.66■■■□□ 2.82
UBE2E3-202ENST00000410062 TNNT2P45379 298 aaPredicted RBP32.66■■■□□ 2.82
UBE2E3-202ENST00000410062 AMER1Q5JTC6 1135 aaPredicted RBP32.66■■■□□ 2.82
UBE2E3-202ENST00000410062 WDR17Q8IZU2 1322 aa32.65■■■□□ 2.82
UBE2E3-202ENST00000410062 CSB-PGBD3P0DP91 1061 aa32.65■■■□□ 2.82
UBE2E3-202ENST00000410062 CRB1P82279 1406 aa32.64■■■□□ 2.82
UBE2E3-202ENST00000410062 HOXC9P31274 260 aa32.64■■■□□ 2.82
UBE2E3-202ENST00000410062 TOM1L2Q6ZVM7 507 aa32.64■■■□□ 2.82
UBE2E3-202ENST00000410062 ONECUT3O60422 494 aaPredicted RBP32.63■■■□□ 2.81
UBE2E3-202ENST00000410062 SEPT12Q8IYM1 358 aa32.62■■■□□ 2.81
UBE2E3-202ENST00000410062 A0A0G2JS52 829 aa32.62■■■□□ 2.81
UBE2E3-202ENST00000410062 BLMP54132 1417 aaPredicted RBP32.62■■■□□ 2.81
UBE2E3-202ENST00000410062 MYT1Q01538 1121 aa32.62■■■□□ 2.81
UBE2E3-202ENST00000410062 ERBB3P21860 1342 aa32.61■■■□□ 2.81
UBE2E3-202ENST00000410062 MORC1Q86VD1 984 aa32.61■■■□□ 2.81
UBE2E3-202ENST00000410062 ANKRD24Q8TF21 1146 aa32.61■■■□□ 2.81
UBE2E3-202ENST00000410062 TCP11L2Q8N4U5 519 aa32.6■■■□□ 2.81
UBE2E3-202ENST00000410062 EMILIN1Q9Y6C2 1016 aa32.6■■■□□ 2.81
UBE2E3-202ENST00000410062 PEAK1Q9H792 1746 aa32.6■■■□□ 2.81
UBE2E3-202ENST00000410062 RTL1A6NKG5 1358 aa32.59■■■□□ 2.81
UBE2E3-202ENST00000410062 LTV1Q96GA3 475 aaPredicted RBP32.59■■■□□ 2.81
UBE2E3-202ENST00000410062 MAP2P11137 1827 aaKnown RBP32.59■■■□□ 2.81
UBE2E3-202ENST00000410062 SOCS7O14512 581 aa32.58■■■□□ 2.81
UBE2E3-202ENST00000410062 CC2D1BQ5T0F9 858 aaKnown RBP32.58■■■□□ 2.81
UBE2E3-202ENST00000410062 CNGB1Q14028 1251 aaPredicted RBP32.57■■■□□ 2.8
UBE2E3-202ENST00000410062 BRWD3Q6RI45 1802 aa32.56■■■□□ 2.8
UBE2E3-202ENST00000410062 PPM1GO15355 546 aaPredicted RBP32.56■■■□□ 2.8
UBE2E3-202ENST00000410062 BARGINQ6ZT62 677 aa32.56■■■□□ 2.8
UBE2E3-202ENST00000410062 POLKQ9UBT6 870 aa32.55■■■□□ 2.8
UBE2E3-202ENST00000410062 THRAP3Q9Y2W1 955 aaKnown RBP32.55■■■□□ 2.8
UBE2E3-202ENST00000410062 FLT4P35916 1363 aa32.55■■■□□ 2.8
UBE2E3-202ENST00000410062 THSD7AQ9UPZ6 1657 aa32.55■■■□□ 2.8
UBE2E3-202ENST00000410062 HSP90AB2PQ58FF8 381 aa32.54■■■□□ 2.8
UBE2E3-202ENST00000410062 CARD10Q9BWT7 1032 aa32.54■■■□□ 2.8
UBE2E3-202ENST00000410062 NLRP2Q9NX02 1062 aa32.54■■■□□ 2.8
UBE2E3-202ENST00000410062 KIF24Q5T7B8 1368 aa32.53■■■□□ 2.8
UBE2E3-202ENST00000410062 INSRP06213 1382 aa32.5■■■□□ 2.79
UBE2E3-202ENST00000410062 NPC1L1Q9UHC9 1359 aa32.5■■■□□ 2.79
UBE2E3-202ENST00000410062 EP400Q96L91 3159 aa32.48■■■□□ 2.79
UBE2E3-202ENST00000410062 FAM208AQ9UK61 1670 aaKnown RBP32.47■■■□□ 2.79
UBE2E3-202ENST00000410062 KRT27Q7Z3Y8 459 aa32.47■■■□□ 2.79
UBE2E3-202ENST00000410062 RGPD2P0DJD1 1756 aa32.46■■■□□ 2.79
UBE2E3-202ENST00000410062 WNK3Q9BYP7 1800 aa32.46■■■□□ 2.79
UBE2E3-202ENST00000410062 DDX10Q13206 875 aaKnown RBP32.45■■■□□ 2.79
UBE2E3-202ENST00000410062 SMG6Q86US8 1419 aaKnown RBP32.45■■■□□ 2.79
UBE2E3-202ENST00000410062 PARP4Q9UKK3 1724 aaKnown RBP32.42■■■□□ 2.78
UBE2E3-202ENST00000410062 NBPF6Q5VWK0 638 aa32.41■■■□□ 2.78
UBE2E3-202ENST00000410062 NBPF4Q96M43 638 aa32.41■■■□□ 2.78
UBE2E3-202ENST00000410062 DISP2A7MBM2 1401 aa32.41■■■□□ 2.78
UBE2E3-202ENST00000410062 FAM182BQ5T319 152 aa32.4■■■□□ 2.78
UBE2E3-202ENST00000410062 CDCA7Q9BWT1 371 aaPredicted RBP32.39■■■□□ 2.78
UBE2E3-202ENST00000410062 USHBP1Q8N6Y0 703 aa32.38■■■□□ 2.77
UBE2E3-202ENST00000410062 LRRC37A3O60309 1634 aa32.38■■■□□ 2.77
UBE2E3-202ENST00000410062 PDE3BQ13370 1112 aa32.37■■■□□ 2.77
UBE2E3-202ENST00000410062 DDB1Q16531 1140 aa32.36■■■□□ 2.77
UBE2E3-202ENST00000410062 UPF1Q92900 1129 aaKnown RBP eCLIP32.36■■■□□ 2.77
UBE2E3-202ENST00000410062 IL2RBP14784 551 aa32.36■■■□□ 2.77
UBE2E3-202ENST00000410062 MTHFSP49914 203 aa32.35■■■□□ 2.77
UBE2E3-202ENST00000410062 EIF4A2Q14240 407 aaKnown RBP32.35■■■□□ 2.77
UBE2E3-202ENST00000410062 ZNF316A6NFI3 1004 aaPredicted RBP32.33■■■□□ 2.77
UBE2E3-202ENST00000410062 EXOC5O00471 708 aa32.3■■■□□ 2.76
UBE2E3-202ENST00000410062 EYA1Q99502 592 aa32.3■■■□□ 2.76
UBE2E3-202ENST00000410062 MEGF6O75095 1541 aa32.27■■■□□ 2.76
UBE2E3-202ENST00000410062 TNS2Q63HR2 1409 aa32.27■■■□□ 2.76
UBE2E3-202ENST00000410062 MARCH10Q8NA82 808 aaPredicted RBP32.25■■■□□ 2.75
UBE2E3-202ENST00000410062 NCAPD2Q15021 1401 aa32.24■■■□□ 2.75
UBE2E3-202ENST00000410062 PPP2R1AP30153 589 aa32.24■■■□□ 2.75
UBE2E3-202ENST00000410062 FAM196AQ6ZSG2 479 aa32.24■■■□□ 2.75
UBE2E3-202ENST00000410062 RAPGEF4Q8WZA2 1011 aa32.24■■■□□ 2.75
UBE2E3-202ENST00000410062 IL13P35225 146 aa32.22■■■□□ 2.75
UBE2E3-202ENST00000410062 PARD3Q8TEW0 1356 aa32.21■■■□□ 2.75
UBE2E3-202ENST00000410062 OVOS2A0A0G2JMS6 1433 aa32.2■■■□□ 2.75
UBE2E3-202ENST00000410062 TATP17735 454 aaPredicted RBP32.2■■■□□ 2.75
UBE2E3-202ENST00000410062 IGSF1Q8N6C5 1336 aa32.2■■■□□ 2.75
UBE2E3-202ENST00000410062 ZCRB1Q8TBF4 217 aaKnown RBP32.17■■■□□ 2.74
UBE2E3-202ENST00000410062 DDX54Q8TDD1 881 aaKnown RBP32.17■■■□□ 2.74
UBE2E3-202ENST00000410062 DIAPH1O60610 1272 aaKnown RBP32.16■■■□□ 2.74
UBE2E3-202ENST00000410062 CCDC125Q86Z20 511 aa32.16■■■□□ 2.74
UBE2E3-202ENST00000410062 RGPD1P0DJD0 1748 aa32.16■■■□□ 2.74
UBE2E3-202ENST00000410062 TRIM37O94972 964 aa32.15■■■□□ 2.74
UBE2E3-202ENST00000410062 COL3A1P02461 1466 aaPredicted RBP32.15■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms