RNA–Protein interactions for RNA: ENST00000409855.5

SCN7A-201, Transcript of sodium voltage-gated channel alpha subunit 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN7A, Length 7,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7A-201ENST00000409855 NAP1L4Q99733 375 aaKnown RBP2.53□□□□□ -2
SCN7A-201ENST00000409855 DIAPH3Q9NSV4 1193 aa2.53□□□□□ -2
SCN7A-201ENST00000409855 CLEC11AQ9Y240 323 aa2.53□□□□□ -2
SCN7A-201ENST00000409855 HMGB1P1B2RPK0 211 aaPredicted RBP2.53□□□□□ -2
SCN7A-201ENST00000409855 GOLGA6L1Q8N7Z2 621 aa2.53□□□□□ -2
SCN7A-201ENST00000409855 WASF1Q92558 559 aa2.53□□□□□ -2
SCN7A-201ENST00000409855 TBX22Q9Y458 520 aa2.53□□□□□ -2
SCN7A-201ENST00000409855 PHF14O94880 888 aa2.53□□□□□ -2.01
SCN7A-201ENST00000409855 PLCG2P16885 1265 aa2.53□□□□□ -2.01
SCN7A-201ENST00000409855 PSMA5P28066 241 aa2.53□□□□□ -2.01
SCN7A-201ENST00000409855 NOLC1Q14978 699 aaKnown RBP eCLIP2.53□□□□□ -2.01
SCN7A-201ENST00000409855 CC2D1BQ5T0F9 858 aaKnown RBP2.53□□□□□ -2.01
SCN7A-201ENST00000409855 RBM26Q5T8P6 1007 aaKnown RBP2.53□□□□□ -2.01
SCN7A-201ENST00000409855 MPHOSPH8Q99549 860 aa2.53□□□□□ -2.01
SCN7A-201ENST00000409855 BIVM-ERCC5R4GMW8 1640 aa2.53□□□□□ -2.01
SCN7A-201ENST00000409855 WIZO95785 1651 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 TULP1O00294 542 aaPredicted RBP2.52□□□□□ -2.01
SCN7A-201ENST00000409855 KIF20AO95235 890 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 IFIT1P09914 478 aaKnown RBP2.52□□□□□ -2.01
SCN7A-201ENST00000409855 POTEJP0CG39 1038 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 IKQ13123 557 aaPredicted RBP2.52□□□□□ -2.01
SCN7A-201ENST00000409855 DDX46Q7L014 1031 aaKnown RBP2.52□□□□□ -2.01
SCN7A-201ENST00000409855 KRT28Q7Z3Y7 464 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 IFNL2Q8IZJ0 200 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 RBM28Q9NW13 759 aaKnown RBP2.52□□□□□ -2.01
SCN7A-201ENST00000409855 ORC3Q9UBD5 711 aaPredicted RBP2.52□□□□□ -2.01
SCN7A-201ENST00000409855 CTNNA3Q9UI47 895 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 TSPYL4Q9UJ04 414 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 MYO6Q9UM54 1294 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 TRAPPC8Q9Y2L5 1435 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 DUOX2Q9NRD8 1548 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 NESP48681 1621 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 NLRP1Q9C000 1473 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 BLMP54132 1417 aaPredicted RBP2.52□□□□□ -2.01
SCN7A-201ENST00000409855 TXLNAP40222 546 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 RBM5P52756 815 aaKnown RBP eCLIP2.52□□□□□ -2.01
SCN7A-201ENST00000409855 DDB1Q16531 1140 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 RALYLQ86SE5 291 aaKnown RBP2.52□□□□□ -2.01
SCN7A-201ENST00000409855 CDK19Q9BWU1 502 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 GTPBP4Q9BZE4 634 aaKnown RBP2.52□□□□□ -2.01
SCN7A-201ENST00000409855 CNNM1Q9NRU3 951 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 MAP3K1Q13233 1512 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 A2MP01023 1474 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 PIK3C2GO75747 1445 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 VIMP08670 466 aaKnown RBP2.52□□□□□ -2.01
SCN7A-201ENST00000409855 ZNF530Q6P9A1 599 aaPredicted RBP2.52□□□□□ -2.01
SCN7A-201ENST00000409855 OGFOD1Q8N543 542 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 STK24Q9Y6E0 443 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 PRDM2Q13029 1718 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 SPATA31A6Q5VVP1 1343 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 PCDH11XQ9BZA7 1347 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 PCDH11YQ9BZA8 1340 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 TNRC18O15417 2968 aaPredicted RBP2.52□□□□□ -2.01
SCN7A-201ENST00000409855 CDKL5O76039 1030 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 CCT4P50991 539 aaKnown RBP2.52□□□□□ -2.01
SCN7A-201ENST00000409855 NCBP3Q53F19 620 aaKnown RBP2.52□□□□□ -2.01
SCN7A-201ENST00000409855 TTC39AQ5SRH9 613 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 ITPRIPQ8IWB1 547 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 NOC3LQ8WTT2 800 aaKnown RBP2.52□□□□□ -2.01
SCN7A-201ENST00000409855 CCDC12Q8WUD4 166 aaPredicted RBP2.52□□□□□ -2.01
SCN7A-201ENST00000409855 EXOC4Q96A65 974 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 PRKAG2Q9UGJ0 569 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 NUP160Q12769 1436 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 CPLX1O14810 134 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 ST18O60284 1047 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 BAG3O95817 575 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 TNNT2P45379 298 aaPredicted RBP2.52□□□□□ -2.01
SCN7A-201ENST00000409855 FAM196AQ6ZSG2 479 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 ZNF804AQ7Z570 1209 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 RUNDC1Q96C34 613 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 DDX19BQ9UMR2 479 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 NOC2LQ9Y3T9 749 aaKnown RBP2.52□□□□□ -2.01
SCN7A-201ENST00000409855 CCDC61Q9Y6R9 512 aa2.52□□□□□ -2.01
SCN7A-201ENST00000409855 ZEB2O60315 1214 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 SLC5A1P13866 664 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 CDR1P51861 262 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 ZKSCAN2Q63HK3 967 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 DRC1Q96MC2 740 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 FMNL2Q96PY5 1086 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 THRAP3Q9Y2W1 955 aaKnown RBP2.51□□□□□ -2.01
SCN7A-201ENST00000409855 RIMS2Q9UQ26 1411 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 ST20-MTHFSA0A0A6YYL1 179 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 REC8O95072 547 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 MTHFSP49914 203 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 TNFAIP1Q13829 316 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 TTF1Q15361 905 aaPredicted RBP2.51□□□□□ -2.01
SCN7A-201ENST00000409855 ODR4Q5SWX8 454 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 ANKRD18AQ8IVF6 992 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 CRACR2BQ8N4Y2 399 aaPredicted RBP2.51□□□□□ -2.01
SCN7A-201ENST00000409855 FRAT1Q92837 279 aaPredicted RBP2.51□□□□□ -2.01
SCN7A-201ENST00000409855 HIRIP3Q9BW71 556 aaPredicted RBP2.51□□□□□ -2.01
SCN7A-201ENST00000409855 LRRC27Q9C0I9 530 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 KCNG1Q9UIX4 513 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 AMOTL2Q9Y2J4 779 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 IPO7O95373 1038 aaKnown RBP2.51□□□□□ -2.01
SCN7A-201ENST00000409855 NCBP1Q09161 790 aaKnown RBP2.51□□□□□ -2.01
SCN7A-201ENST00000409855 PARP10Q53GL7 1025 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 NFXL1Q6ZNB6 911 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 SKAP1Q86WV1 359 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 CCDC150Q8NCX0 1101 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 418.4 ms