RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 BLMP54132 1417 aaPredicted RBP22.52■■□□□ 1.2
SUMO1-208ENST00000409627 ZBTB7CA1YPR0 619 aa22.52■■□□□ 1.2
SUMO1-208ENST00000409627 CHRNA2Q15822 529 aa22.52■■□□□ 1.2
SUMO1-208ENST00000409627 C8orf37Q96NL8 207 aa22.52■■□□□ 1.2
SUMO1-208ENST00000409627 EMILIN1Q9Y6C2 1016 aa22.52■■□□□ 1.2
SUMO1-208ENST00000409627 CDK12Q9NYV4 1490 aaPredicted RBP22.52■■□□□ 1.2
SUMO1-208ENST00000409627 AMPHP49418 695 aa22.51■■□□□ 1.19
SUMO1-208ENST00000409627 PPP2R1AP30153 589 aa22.5■■□□□ 1.19
SUMO1-208ENST00000409627 IP6K1Q92551 441 aa22.5■■□□□ 1.19
SUMO1-208ENST00000409627 ANP32CO43423 234 aa22.49■■□□□ 1.19
SUMO1-208ENST00000409627 HOXC9P31274 260 aa22.49■■□□□ 1.19
SUMO1-208ENST00000409627 FNBP4Q8N3X1 1017 aaPredicted RBP22.49■■□□□ 1.19
SUMO1-208ENST00000409627 NGLY1Q96IV0 654 aa22.49■■□□□ 1.19
SUMO1-208ENST00000409627 FAM208AQ9UK61 1670 aaKnown RBP22.49■■□□□ 1.19
SUMO1-208ENST00000409627 COL5A2P05997 1499 aaPredicted RBP22.48■■□□□ 1.19
SUMO1-208ENST00000409627 MTHFSP49914 203 aa22.47■■□□□ 1.19
SUMO1-208ENST00000409627 BTG4Q9NY30 223 aa22.47■■□□□ 1.19
SUMO1-208ENST00000409627 AXIN2Q9Y2T1 843 aa22.47■■□□□ 1.19
SUMO1-208ENST00000409627 MYBBP1AQ9BQG0 1328 aaKnown RBP22.47■■□□□ 1.19
SUMO1-208ENST00000409627 INSRP06213 1382 aa22.47■■□□□ 1.19
SUMO1-208ENST00000409627 BCL9LQ86UU0 1499 aa22.47■■□□□ 1.19
SUMO1-208ENST00000409627 PPM1GO15355 546 aaPredicted RBP22.46■■□□□ 1.19
SUMO1-208ENST00000409627 DIEXFQ68CQ4 756 aaKnown RBP22.46■■□□□ 1.19
SUMO1-208ENST00000409627 AFF2P51816 1311 aa22.45■■□□□ 1.18
SUMO1-208ENST00000409627 COL3A1P02461 1466 aaPredicted RBP22.43■■□□□ 1.18
SUMO1-208ENST00000409627 ERBB3P21860 1342 aa22.43■■□□□ 1.18
SUMO1-208ENST00000409627 HSP90AB2PQ58FF8 381 aa22.43■■□□□ 1.18
SUMO1-208ENST00000409627 UNC5CLQ8IV45 518 aa22.42■■□□□ 1.18
SUMO1-208ENST00000409627 USP21Q9UK80 565 aa22.42■■□□□ 1.18
SUMO1-208ENST00000409627 RGPD2P0DJD1 1756 aa22.41■■□□□ 1.18
SUMO1-208ENST00000409627 WDR17Q8IZU2 1322 aa22.4■■□□□ 1.18
SUMO1-208ENST00000409627 ANKRD24Q8TF21 1146 aa22.4■■□□□ 1.18
SUMO1-208ENST00000409627 EVA1CP58658 441 aa22.39■■□□□ 1.17
SUMO1-208ENST00000409627 CFAP53Q96M91 514 aa22.39■■□□□ 1.17
SUMO1-208ENST00000409627 STRN4Q9NRL3 753 aa22.39■■□□□ 1.17
SUMO1-208ENST00000409627 ATRNO75882 1429 aa22.39■■□□□ 1.17
SUMO1-208ENST00000409627 RGPD1P0DJD0 1748 aa22.38■■□□□ 1.17
SUMO1-208ENST00000409627 ZNF772Q68DY9 489 aaPredicted RBP22.38■■□□□ 1.17
SUMO1-208ENST00000409627 CRB1P82279 1406 aa22.38■■□□□ 1.17
SUMO1-208ENST00000409627 CSB-PGBD3P0DP91 1061 aa22.36■■□□□ 1.17
SUMO1-208ENST00000409627 EIF4A2Q14240 407 aaKnown RBP22.36■■□□□ 1.17
SUMO1-208ENST00000409627 VPS72Q15906 364 aa22.36■■□□□ 1.17
SUMO1-208ENST00000409627 LARP1Q6PKG0 1096 aaKnown RBP22.36■■□□□ 1.17
SUMO1-208ENST00000409627 LTV1Q96GA3 475 aaPredicted RBP22.36■■□□□ 1.17
SUMO1-208ENST00000409627 PHF23Q9BUL5 403 aaPredicted RBP22.36■■□□□ 1.17
SUMO1-208ENST00000409627 WNK3Q9BYP7 1800 aa22.36■■□□□ 1.17
SUMO1-208ENST00000409627 TRPC5Q9UL62 973 aaPredicted RBP22.35■■□□□ 1.17
SUMO1-208ENST00000409627 DIAPH1O60610 1272 aaKnown RBP22.34■■□□□ 1.17
SUMO1-208ENST00000409627 NCAPD2Q15021 1401 aa22.33■■□□□ 1.17
SUMO1-208ENST00000409627 IL13P35225 146 aa22.33■■□□□ 1.17
SUMO1-208ENST00000409627 TOM1L2Q6ZVM7 507 aa22.33■■□□□ 1.17
SUMO1-208ENST00000409627 RGS17Q9UGC6 210 aaPredicted RBP22.33■■□□□ 1.17
SUMO1-208ENST00000409627 GLI3P10071 1580 aa22.33■■□□□ 1.16
SUMO1-208ENST00000409627 SPATA31A5Q5VU36 1347 aa22.32■■□□□ 1.16
SUMO1-208ENST00000409627 SPATA31A7Q8IWB4 1347 aa22.32■■□□□ 1.16
SUMO1-208ENST00000409627 CARD10Q9BWT7 1032 aa22.32■■□□□ 1.16
SUMO1-208ENST00000409627 SPATA31A1Q5TZJ5 1347 aa22.31■■□□□ 1.16
SUMO1-208ENST00000409627 NLRP2Q9NX02 1062 aa22.31■■□□□ 1.16
SUMO1-208ENST00000409627 QTRT2Q9H974 415 aaKnown RBP22.3■■□□□ 1.16
SUMO1-208ENST00000409627 IGSF1Q8N6C5 1336 aa22.3■■□□□ 1.16
SUMO1-208ENST00000409627 NBPF6Q5VWK0 638 aa22.29■■□□□ 1.16
SUMO1-208ENST00000409627 NBPF4Q96M43 638 aa22.29■■□□□ 1.16
SUMO1-208ENST00000409627 EYA1Q99502 592 aa22.29■■□□□ 1.16
SUMO1-208ENST00000409627 CCDC9Q9Y3X0 531 aaKnown RBP22.29■■□□□ 1.16
SUMO1-208ENST00000409627 GJD4Q96KN9 370 aaPredicted RBP22.28■■□□□ 1.16
SUMO1-208ENST00000409627 THRAP3Q9Y2W1 955 aaKnown RBP22.28■■□□□ 1.16
SUMO1-208ENST00000409627 TCP11L2Q8N4U5 519 aa22.27■■□□□ 1.16
SUMO1-208ENST00000409627 PARP4Q9UKK3 1724 aaKnown RBP22.27■■□□□ 1.16
SUMO1-208ENST00000409627 NUDCQ9Y266 331 aa22.27■■□□□ 1.16
SUMO1-208ENST00000409627 THSD7AQ9UPZ6 1657 aa22.26■■□□□ 1.15
SUMO1-208ENST00000409627 USP35Q9P2H5 1018 aa22.25■■□□□ 1.15
SUMO1-208ENST00000409627 KDRP35968 1356 aa22.25■■□□□ 1.15
SUMO1-208ENST00000409627 DISP2A7MBM2 1401 aa22.24■■□□□ 1.15
SUMO1-208ENST00000409627 RBM6P78332 1123 aaKnown RBP22.24■■□□□ 1.15
SUMO1-208ENST00000409627 CCDC184Q52MB2 194 aa22.24■■□□□ 1.15
SUMO1-208ENST00000409627 BARGINQ6ZT62 677 aa22.24■■□□□ 1.15
SUMO1-208ENST00000409627 CCER2I3L3R5 266 aa22.23■■□□□ 1.15
SUMO1-208ENST00000409627 U2SURPO15042 1029 aaKnown RBP22.23■■□□□ 1.15
SUMO1-208ENST00000409627 POTEAQ6S8J7 498 aa22.23■■□□□ 1.15
SUMO1-208ENST00000409627 MIER1Q8N108 512 aa22.23■■□□□ 1.15
SUMO1-208ENST00000409627 USHBP1Q8N6Y0 703 aa22.23■■□□□ 1.15
SUMO1-208ENST00000409627 MRS2Q9HD23 443 aa22.23■■□□□ 1.15
SUMO1-208ENST00000409627 PLEKHG2Q9H7P9 1386 aa22.21■■□□□ 1.15
SUMO1-208ENST00000409627 MEGF6O75095 1541 aa22.21■■□□□ 1.15
SUMO1-208ENST00000409627 LRRC37A3O60309 1634 aa22.2■■□□□ 1.15
SUMO1-208ENST00000409627 PKD1L3Q7Z443 1732 aa22.2■■□□□ 1.14
SUMO1-208ENST00000409627 RXRBP28702 533 aa22.2■■□□□ 1.14
SUMO1-208ENST00000409627 SULT6B1Q6IMI4 303 aa22.2■■□□□ 1.14
SUMO1-208ENST00000409627 CDCA7Q9BWT1 371 aaPredicted RBP22.2■■□□□ 1.14
SUMO1-208ENST00000409627 ONECUT3O60422 494 aaPredicted RBP22.19■■□□□ 1.14
SUMO1-208ENST00000409627 U2AF1L5P0DN76 240 aaPredicted RBP22.19■■□□□ 1.14
SUMO1-208ENST00000409627 IL2RBP14784 551 aa22.19■■□□□ 1.14
SUMO1-208ENST00000409627 U2AF1Q01081 240 aaKnown RBP eCLIP22.19■■□□□ 1.14
SUMO1-208ENST00000409627 FAM98CQ17RN3 349 aaKnown RBP22.19■■□□□ 1.14
SUMO1-208ENST00000409627 AEBP1Q8IUX7 1158 aa22.19■■□□□ 1.14
SUMO1-208ENST00000409627 OVOS2A0A0G2JMS6 1433 aa22.18■■□□□ 1.14
SUMO1-208ENST00000409627 WDR43Q15061 677 aaKnown RBP eCLIP22.18■■□□□ 1.14
SUMO1-208ENST00000409627 SHANK3Q9BYB0 1731 aa22.17■■□□□ 1.14
SUMO1-208ENST00000409627 HMOX1P09601 288 aa22.17■■□□□ 1.14
SUMO1-208ENST00000409627 RAPGEF4Q8WZA2 1011 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms