RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 CAMTA1Q9Y6Y1 1673 aa20.43■□□□□ 0.86
NIF3L1-205ENST00000409588 BRWD3Q6RI45 1802 aa20.43■□□□□ 0.86
NIF3L1-205ENST00000409588 LARP1Q6PKG0 1096 aaKnown RBP20.42■□□□□ 0.86
NIF3L1-205ENST00000409588 FAM196AQ6ZSG2 479 aa20.42■□□□□ 0.86
NIF3L1-205ENST00000409588 ARHGEF25Q86VW2 580 aa20.42■□□□□ 0.86
NIF3L1-205ENST00000409588 SLC12A5Q9H2X9 1139 aa20.42■□□□□ 0.86
NIF3L1-205ENST00000409588 CDCA8Q53HL2 280 aa20.41■□□□□ 0.86
NIF3L1-205ENST00000409588 USP31Q70CQ4 1352 aa20.41■□□□□ 0.86
NIF3L1-205ENST00000409588 AKAP12Q02952 1782 aa20.41■□□□□ 0.86
NIF3L1-205ENST00000409588 PDE3BQ13370 1112 aa20.4■□□□□ 0.86
NIF3L1-205ENST00000409588 PCGF6Q9BYE7 350 aa20.4■□□□□ 0.86
NIF3L1-205ENST00000409588 USP35Q9P2H5 1018 aa20.4■□□□□ 0.86
NIF3L1-205ENST00000409588 LMO7Q8WWI1 1683 aa20.39■□□□□ 0.86
NIF3L1-205ENST00000409588 BAG6P46379 1132 aa20.39■□□□□ 0.85
NIF3L1-205ENST00000409588 TMF1P82094 1093 aa20.39■□□□□ 0.85
NIF3L1-205ENST00000409588 COL5A2P05997 1499 aaPredicted RBP20.38■□□□□ 0.85
NIF3L1-205ENST00000409588 CRB1P82279 1406 aa20.38■□□□□ 0.85
NIF3L1-205ENST00000409588 CDCA7Q9BWT1 371 aaPredicted RBP20.38■□□□□ 0.85
NIF3L1-205ENST00000409588 PIK3C2AO00443 1686 aa20.38■□□□□ 0.85
NIF3L1-205ENST00000409588 THSD7AQ9UPZ6 1657 aa20.38■□□□□ 0.85
NIF3L1-205ENST00000409588 EDC4Q6P2E9 1401 aaKnown RBP20.37■□□□□ 0.85
NIF3L1-205ENST00000409588 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.37■□□□□ 0.85
NIF3L1-205ENST00000409588 ZBTB7CA1YPR0 619 aa20.36■□□□□ 0.85
NIF3L1-205ENST00000409588 TOM1L2Q6ZVM7 507 aa20.36■□□□□ 0.85
NIF3L1-205ENST00000409588 CD163L1Q9NR16 1453 aa20.36■□□□□ 0.85
NIF3L1-205ENST00000409588 WDR17Q8IZU2 1322 aa20.35■□□□□ 0.85
NIF3L1-205ENST00000409588 AXIN2Q9Y2T1 843 aa20.35■□□□□ 0.85
NIF3L1-205ENST00000409588 USP47Q96K76 1375 aa20.34■□□□□ 0.85
NIF3L1-205ENST00000409588 MON2Q7Z3U7 1717 aa20.33■□□□□ 0.85
NIF3L1-205ENST00000409588 ABCC6O95255 1503 aa20.32■□□□□ 0.84
NIF3L1-205ENST00000409588 DEFB132Q7Z7B7 95 aa20.32■□□□□ 0.84
NIF3L1-205ENST00000409588 NME9Q86XW9 330 aa20.32■□□□□ 0.84
NIF3L1-205ENST00000409588 CARD10Q9BWT7 1032 aa20.32■□□□□ 0.84
NIF3L1-205ENST00000409588 A0A1W2PP64 1363 aa20.32■□□□□ 0.84
NIF3L1-205ENST00000409588 CSB-PGBD3P0DP91 1061 aa20.3■□□□□ 0.84
NIF3L1-205ENST00000409588 COL18A1P39060 1754 aa20.29■□□□□ 0.84
NIF3L1-205ENST00000409588 SOX12O15370 315 aa20.29■□□□□ 0.84
NIF3L1-205ENST00000409588 DDB1Q16531 1140 aa20.29■□□□□ 0.84
NIF3L1-205ENST00000409588 FAM182BQ5T319 152 aa20.29■□□□□ 0.84
NIF3L1-205ENST00000409588 SAMD1Q6SPF0 538 aaPredicted RBP20.29■□□□□ 0.84
NIF3L1-205ENST00000409588 DISP2A7MBM2 1401 aa20.28■□□□□ 0.84
NIF3L1-205ENST00000409588 NFAT5O94916 1531 aa20.28■□□□□ 0.84
NIF3L1-205ENST00000409588 CCER1Q8TC90 406 aaPredicted RBP20.28■□□□□ 0.84
NIF3L1-205ENST00000409588 COG3Q96JB2 828 aa20.28■□□□□ 0.84
NIF3L1-205ENST00000409588 ANKRD36BQ8N2N9 1353 aa20.28■□□□□ 0.84
NIF3L1-205ENST00000409588 USP54Q70EL1 1684 aa20.28■□□□□ 0.84
NIF3L1-205ENST00000409588 PARD3Q8TEW0 1356 aa20.27■□□□□ 0.84
NIF3L1-205ENST00000409588 CCDC7Q96M83 1385 aa20.27■□□□□ 0.84
NIF3L1-205ENST00000409588 TRIM37O94972 964 aa20.26■□□□□ 0.83
NIF3L1-205ENST00000409588 RGPD1P0DJD0 1748 aa20.26■□□□□ 0.83
NIF3L1-205ENST00000409588 EXOC5O00471 708 aa20.24■□□□□ 0.83
NIF3L1-205ENST00000409588 APBA3O96018 575 aa20.24■□□□□ 0.83
NIF3L1-205ENST00000409588 EN1Q05925 392 aaPredicted RBP20.24■□□□□ 0.83
NIF3L1-205ENST00000409588 PARP4Q9UKK3 1724 aaKnown RBP20.24■□□□□ 0.83
NIF3L1-205ENST00000409588 OVOS2A0A0J9YW53 1432 aa20.23■□□□□ 0.83
NIF3L1-205ENST00000409588 OVOS2Q6IE36 1432 aa20.23■□□□□ 0.83
NIF3L1-205ENST00000409588 IP6K1Q92551 441 aa20.23■□□□□ 0.83
NIF3L1-205ENST00000409588 ERBB3P21860 1342 aa20.23■□□□□ 0.83
NIF3L1-205ENST00000409588 CAMKK2Q96RR4 588 aa20.22■□□□□ 0.83
NIF3L1-205ENST00000409588 OVOS2A0A0G2JMS6 1433 aa20.21■□□□□ 0.83
NIF3L1-205ENST00000409588 BCL9O00512 1426 aa20.21■□□□□ 0.83
NIF3L1-205ENST00000409588 FYB1O15117 783 aa20.2■□□□□ 0.82
NIF3L1-205ENST00000409588 NLRP2Q9NX02 1062 aa20.2■□□□□ 0.82
NIF3L1-205ENST00000409588 EIF4G2P78344 907 aaKnown RBP eCLIP20.19■□□□□ 0.82
NIF3L1-205ENST00000409588 ANKRD24Q8TF21 1146 aa20.19■□□□□ 0.82
NIF3L1-205ENST00000409588 PLSCR1O15162 318 aa20.18■□□□□ 0.82
NIF3L1-205ENST00000409588 EZH2Q15910 746 aaKnown RBP20.18■□□□□ 0.82
NIF3L1-205ENST00000409588 BCL11BQ9C0K0 894 aaPredicted RBP20.18■□□□□ 0.82
NIF3L1-205ENST00000409588 IL2RBP14784 551 aa20.17■□□□□ 0.82
NIF3L1-205ENST00000409588 AMPHP49418 695 aa20.16■□□□□ 0.82
NIF3L1-205ENST00000409588 NBPF14Q5TI25 921 aa20.16■□□□□ 0.82
NIF3L1-205ENST00000409588 MARCH10Q8NA82 808 aaPredicted RBP20.16■□□□□ 0.82
NIF3L1-205ENST00000409588 RGPD5Q99666 1765 aa20.16■□□□□ 0.82
NIF3L1-205ENST00000409588 SRCAPQ6ZRS2 3230 aa20.14■□□□□ 0.82
NIF3L1-205ENST00000409588 MAP3K19Q56UN5 1328 aa20.14■□□□□ 0.81
NIF3L1-205ENST00000409588 TNS1Q9HBL0 1735 aaKnown RBP20.13■□□□□ 0.81
NIF3L1-205ENST00000409588 KIF24Q5T7B8 1368 aa20.13■□□□□ 0.81
NIF3L1-205ENST00000409588 HOXC9P31274 260 aa20.13■□□□□ 0.81
NIF3L1-205ENST00000409588 LTN1O94822 1766 aa20.13■□□□□ 0.81
NIF3L1-205ENST00000409588 RTL1A6NKG5 1358 aa20.12■□□□□ 0.81
NIF3L1-205ENST00000409588 GGNBP2Q9H3C7 697 aa20.12■□□□□ 0.81
NIF3L1-205ENST00000409588 LRRC37A3O60309 1634 aa20.11■□□□□ 0.81
NIF3L1-205ENST00000409588 PEAK1Q9H792 1746 aa20.1■□□□□ 0.81
NIF3L1-205ENST00000409588 CARD14Q9BXL6 1004 aa20.1■□□□□ 0.81
NIF3L1-205ENST00000409588 CGNL1Q0VF96 1302 aa20.09■□□□□ 0.81
NIF3L1-205ENST00000409588 TNS2Q63HR2 1409 aa20.09■□□□□ 0.81
NIF3L1-205ENST00000409588 WNK3Q9BYP7 1800 aa20.08■□□□□ 0.8
NIF3L1-205ENST00000409588 PSDA5PKW4 1024 aaPredicted RBP20.07■□□□□ 0.8
NIF3L1-205ENST00000409588 HSPA5P11021 654 aaKnown RBP20.07■□□□□ 0.8
NIF3L1-205ENST00000409588 R3HDM1Q15032 1099 aaKnown RBP20.07■□□□□ 0.8
NIF3L1-205ENST00000409588 LTV1Q96GA3 475 aaPredicted RBP20.07■□□□□ 0.8
NIF3L1-205ENST00000409588 FAM208AQ9UK61 1670 aaKnown RBP20.06■□□□□ 0.8
NIF3L1-205ENST00000409588 SMG6Q86US8 1419 aaKnown RBP20.05■□□□□ 0.8
NIF3L1-205ENST00000409588 FBLN1P23142 703 aa20.05■□□□□ 0.8
NIF3L1-205ENST00000409588 RRS1Q15050 365 aaKnown RBP20.05■□□□□ 0.8
NIF3L1-205ENST00000409588 INSRP06213 1382 aa20.05■□□□□ 0.8
NIF3L1-205ENST00000409588 NSD3Q9BZ95 1437 aa20.04■□□□□ 0.8
NIF3L1-205ENST00000409588 FLT4P35916 1363 aa20.04■□□□□ 0.8
NIF3L1-205ENST00000409588 SBF2Q86WG5 1849 aa20.04■□□□□ 0.8
NIF3L1-205ENST00000409588 RGPD3A6NKT7 1758 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms