RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 SPATA31A5Q5VU36 1347 aa22.48■■□□□ 1.19
TSPAN4-208ENST00000409531 SPATA31A7Q8IWB4 1347 aa22.48■■□□□ 1.19
TSPAN4-208ENST00000409531 DIEXFQ68CQ4 756 aaKnown RBP22.48■■□□□ 1.19
TSPAN4-208ENST00000409531 AATKQ6ZMQ8 1374 aa22.48■■□□□ 1.19
TSPAN4-208ENST00000409531 GLI3P10071 1580 aa22.47■■□□□ 1.19
TSPAN4-208ENST00000409531 COG3Q96JB2 828 aa22.46■■□□□ 1.19
TSPAN4-208ENST00000409531 CAMTA1Q9Y6Y1 1673 aa22.46■■□□□ 1.19
TSPAN4-208ENST00000409531 NRAPQ86VF7 1730 aa22.45■■□□□ 1.19
TSPAN4-208ENST00000409531 SEPT12Q8IYM1 358 aa22.45■■□□□ 1.18
TSPAN4-208ENST00000409531 GGNBP2Q9H3C7 697 aa22.45■■□□□ 1.18
TSPAN4-208ENST00000409531 CC2D1BQ5T0F9 858 aaKnown RBP22.44■■□□□ 1.18
TSPAN4-208ENST00000409531 SPATA31A1Q5TZJ5 1347 aa22.44■■□□□ 1.18
TSPAN4-208ENST00000409531 FAM98CQ17RN3 349 aaKnown RBP22.43■■□□□ 1.18
TSPAN4-208ENST00000409531 LARP1Q6PKG0 1096 aaKnown RBP22.43■■□□□ 1.18
TSPAN4-208ENST00000409531 AXIN2Q9Y2T1 843 aa22.43■■□□□ 1.18
TSPAN4-208ENST00000409531 OVOS2A0A0J9YW53 1432 aa22.43■■□□□ 1.18
TSPAN4-208ENST00000409531 OVOS2Q6IE36 1432 aa22.43■■□□□ 1.18
TSPAN4-208ENST00000409531 ANP32CO43423 234 aa22.42■■□□□ 1.18
TSPAN4-208ENST00000409531 MORC1Q86VD1 984 aa22.42■■□□□ 1.18
TSPAN4-208ENST00000409531 LMO7Q8WWI1 1683 aa22.41■■□□□ 1.18
TSPAN4-208ENST00000409531 RALBP1Q15311 655 aa22.4■■□□□ 1.18
TSPAN4-208ENST00000409531 USP35Q9P2H5 1018 aa22.4■■□□□ 1.18
TSPAN4-208ENST00000409531 NFAT5O94916 1531 aa22.4■■□□□ 1.18
TSPAN4-208ENST00000409531 A0A0G2JS52 829 aa22.39■■□□□ 1.18
TSPAN4-208ENST00000409531 MYT1Q01538 1121 aa22.39■■□□□ 1.18
TSPAN4-208ENST00000409531 CNGB1Q14028 1251 aaPredicted RBP22.39■■□□□ 1.18
TSPAN4-208ENST00000409531 COL5A2P05997 1499 aaPredicted RBP22.38■■□□□ 1.17
TSPAN4-208ENST00000409531 PARD3Q8TEW0 1356 aa22.38■■□□□ 1.17
TSPAN4-208ENST00000409531 BARGINQ6ZT62 677 aa22.37■■□□□ 1.17
TSPAN4-208ENST00000409531 TCP11L2Q8N4U5 519 aa22.37■■□□□ 1.17
TSPAN4-208ENST00000409531 PRKRIP1Q9H875 184 aaPredicted RBP22.37■■□□□ 1.17
TSPAN4-208ENST00000409531 THRAP3Q9Y2W1 955 aaKnown RBP22.37■■□□□ 1.17
TSPAN4-208ENST00000409531 COL18A1P39060 1754 aa22.36■■□□□ 1.17
TSPAN4-208ENST00000409531 TOM1L2Q6ZVM7 507 aa22.35■■□□□ 1.17
TSPAN4-208ENST00000409531 KRT27Q7Z3Y8 459 aa22.35■■□□□ 1.17
TSPAN4-208ENST00000409531 MAP2P11137 1827 aaKnown RBP22.35■■□□□ 1.17
TSPAN4-208ENST00000409531 WDR17Q8IZU2 1322 aa22.35■■□□□ 1.17
TSPAN4-208ENST00000409531 CRB1P82279 1406 aa22.34■■□□□ 1.17
TSPAN4-208ENST00000409531 CSB-PGBD3P0DP91 1061 aa22.33■■□□□ 1.17
TSPAN4-208ENST00000409531 FBLN1P23142 703 aa22.32■■□□□ 1.16
TSPAN4-208ENST00000409531 IP6K1Q92551 441 aa22.32■■□□□ 1.16
TSPAN4-208ENST00000409531 TNNT2P45379 298 aaPredicted RBP22.31■■□□□ 1.16
TSPAN4-208ENST00000409531 MAP3K19Q56UN5 1328 aa22.31■■□□□ 1.16
TSPAN4-208ENST00000409531 MYBBP1AQ9BQG0 1328 aaKnown RBP22.31■■□□□ 1.16
TSPAN4-208ENST00000409531 CARD10Q9BWT7 1032 aa22.31■■□□□ 1.16
TSPAN4-208ENST00000409531 ABCC6O95255 1503 aa22.3■■□□□ 1.16
TSPAN4-208ENST00000409531 LTN1O94822 1766 aa22.3■■□□□ 1.16
TSPAN4-208ENST00000409531 SRCAPQ6ZRS2 3230 aa22.3■■□□□ 1.16
TSPAN4-208ENST00000409531 CCDC125Q86Z20 511 aa22.3■■□□□ 1.16
TSPAN4-208ENST00000409531 AMPHP49418 695 aa22.29■■□□□ 1.16
TSPAN4-208ENST00000409531 BRWD3Q6RI45 1802 aa22.28■■□□□ 1.16
TSPAN4-208ENST00000409531 ERBB3P21860 1342 aa22.28■■□□□ 1.16
TSPAN4-208ENST00000409531 ANKRD24Q8TF21 1146 aa22.28■■□□□ 1.16
TSPAN4-208ENST00000409531 PPP2R1AP30153 589 aa22.27■■□□□ 1.16
TSPAN4-208ENST00000409531 RRS1Q15050 365 aaKnown RBP22.27■■□□□ 1.16
TSPAN4-208ENST00000409531 HOXC9P31274 260 aa22.26■■□□□ 1.15
TSPAN4-208ENST00000409531 PDE3BQ13370 1112 aa22.26■■□□□ 1.15
TSPAN4-208ENST00000409531 RGPD5Q99666 1765 aa22.26■■□□□ 1.15
TSPAN4-208ENST00000409531 BLMP54132 1417 aaPredicted RBP22.26■■□□□ 1.15
TSPAN4-208ENST00000409531 THSD7AQ9UPZ6 1657 aa22.25■■□□□ 1.15
TSPAN4-208ENST00000409531 CDCA7Q9BWT1 371 aaPredicted RBP22.25■■□□□ 1.15
TSPAN4-208ENST00000409531 NLRP2Q9NX02 1062 aa22.25■■□□□ 1.15
TSPAN4-208ENST00000409531 KIF24Q5T7B8 1368 aa22.24■■□□□ 1.15
TSPAN4-208ENST00000409531 SMG6Q86US8 1419 aaKnown RBP22.24■■□□□ 1.15
TSPAN4-208ENST00000409531 FAM182BQ5T319 152 aa22.23■■□□□ 1.15
TSPAN4-208ENST00000409531 LTV1Q96GA3 475 aaPredicted RBP22.23■■□□□ 1.15
TSPAN4-208ENST00000409531 POLKQ9UBT6 870 aa22.23■■□□□ 1.15
TSPAN4-208ENST00000409531 EP400Q96L91 3159 aa22.23■■□□□ 1.15
TSPAN4-208ENST00000409531 RTL1A6NKG5 1358 aa22.23■■□□□ 1.15
TSPAN4-208ENST00000409531 MTHFSP49914 203 aa22.21■■□□□ 1.15
TSPAN4-208ENST00000409531 DDB1Q16531 1140 aa22.21■■□□□ 1.15
TSPAN4-208ENST00000409531 FAM196AQ6ZSG2 479 aa22.21■■□□□ 1.15
TSPAN4-208ENST00000409531 EMILIN1Q9Y6C2 1016 aa22.21■■□□□ 1.15
TSPAN4-208ENST00000409531 FLT4P35916 1363 aa22.21■■□□□ 1.15
TSPAN4-208ENST00000409531 PPM1GO15355 546 aaPredicted RBP22.2■■□□□ 1.14
TSPAN4-208ENST00000409531 CFAP53Q96M91 514 aa22.2■■□□□ 1.14
TSPAN4-208ENST00000409531 MIER1Q8N108 512 aa22.19■■□□□ 1.14
TSPAN4-208ENST00000409531 PEAK1Q9H792 1746 aa22.18■■□□□ 1.14
TSPAN4-208ENST00000409531 EXOC5O00471 708 aa22.18■■□□□ 1.14
TSPAN4-208ENST00000409531 SF3B2Q13435 895 aaKnown RBP22.18■■□□□ 1.14
TSPAN4-208ENST00000409531 HSP90AB2PQ58FF8 381 aa22.18■■□□□ 1.14
TSPAN4-208ENST00000409531 CCER2I3L3R5 266 aa22.16■■□□□ 1.14
TSPAN4-208ENST00000409531 INSRP06213 1382 aa22.16■■□□□ 1.14
TSPAN4-208ENST00000409531 IL2RBP14784 551 aa22.15■■□□□ 1.14
TSPAN4-208ENST00000409531 DISP2A7MBM2 1401 aa22.14■■□□□ 1.14
TSPAN4-208ENST00000409531 PARP4Q9UKK3 1724 aaKnown RBP22.14■■□□□ 1.13
TSPAN4-208ENST00000409531 NBPF6Q5VWK0 638 aa22.12■■□□□ 1.13
TSPAN4-208ENST00000409531 NBPF4Q96M43 638 aa22.12■■□□□ 1.13
TSPAN4-208ENST00000409531 TRIM37O94972 964 aa22.11■■□□□ 1.13
TSPAN4-208ENST00000409531 MARCH10Q8NA82 808 aaPredicted RBP22.11■■□□□ 1.13
TSPAN4-208ENST00000409531 MRS2Q9HD23 443 aa22.11■■□□□ 1.13
TSPAN4-208ENST00000409531 DEFB132Q7Z7B7 95 aa22.1■■□□□ 1.13
TSPAN4-208ENST00000409531 COL3A1P02461 1466 aaPredicted RBP22.1■■□□□ 1.13
TSPAN4-208ENST00000409531 FAM208AQ9UK61 1670 aaKnown RBP22.1■■□□□ 1.13
TSPAN4-208ENST00000409531 DIAPH1O60610 1272 aaKnown RBP22.09■■□□□ 1.13
TSPAN4-208ENST00000409531 BAG6P46379 1132 aa22.09■■□□□ 1.13
TSPAN4-208ENST00000409531 NUDCQ9Y266 331 aa22.08■■□□□ 1.13
TSPAN4-208ENST00000409531 OVOS2A0A0G2JMS6 1433 aa22.08■■□□□ 1.12
TSPAN4-208ENST00000409531 LRRC37A3O60309 1634 aa22.07■■□□□ 1.12
TSPAN4-208ENST00000409531 EIF4A2Q14240 407 aaKnown RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms