RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 RBM6P78332 1123 aaKnown RBP20.22■□□□□ 0.83
SUMO1-207ENST00000409498 IP6K1Q92551 441 aa20.22■□□□□ 0.83
SUMO1-207ENST00000409498 GJD4Q96KN9 370 aaPredicted RBP20.22■□□□□ 0.83
SUMO1-207ENST00000409498 MAP3K19Q56UN5 1328 aa20.22■□□□□ 0.83
SUMO1-207ENST00000409498 RTL1A6NKG5 1358 aa20.21■□□□□ 0.83
SUMO1-207ENST00000409498 BLMP54132 1417 aaPredicted RBP20.21■□□□□ 0.83
SUMO1-207ENST00000409498 FBLN1P23142 703 aa20.21■□□□□ 0.83
SUMO1-207ENST00000409498 CDK12Q9NYV4 1490 aaPredicted RBP20.2■□□□□ 0.82
SUMO1-207ENST00000409498 RXRBP28702 533 aa20.2■□□□□ 0.82
SUMO1-207ENST00000409498 RGPD5Q99666 1765 aa20.2■□□□□ 0.82
SUMO1-207ENST00000409498 ZNF316A6NFI3 1004 aaPredicted RBP20.19■□□□□ 0.82
SUMO1-207ENST00000409498 GLI3P10071 1580 aa20.19■□□□□ 0.82
SUMO1-207ENST00000409498 SPATA31A5Q5VU36 1347 aa20.19■□□□□ 0.82
SUMO1-207ENST00000409498 SPATA31A7Q8IWB4 1347 aa20.19■□□□□ 0.82
SUMO1-207ENST00000409498 MAP2P11137 1827 aaKnown RBP20.18■□□□□ 0.82
SUMO1-207ENST00000409498 ONECUT3O60422 494 aaPredicted RBP20.18■□□□□ 0.82
SUMO1-207ENST00000409498 HOXC9P31274 260 aa20.18■□□□□ 0.82
SUMO1-207ENST00000409498 RRS1Q15050 365 aaKnown RBP20.18■□□□□ 0.82
SUMO1-207ENST00000409498 MORC1Q86VD1 984 aa20.18■□□□□ 0.82
SUMO1-207ENST00000409498 ZBTB7CA1YPR0 619 aa20.17■□□□□ 0.82
SUMO1-207ENST00000409498 EVA1CP58658 441 aa20.17■□□□□ 0.82
SUMO1-207ENST00000409498 WDR17Q8IZU2 1322 aa20.17■□□□□ 0.82
SUMO1-207ENST00000409498 SMG6Q86US8 1419 aaKnown RBP20.17■□□□□ 0.82
SUMO1-207ENST00000409498 POLKQ9UBT6 870 aa20.16■□□□□ 0.82
SUMO1-207ENST00000409498 ERBB3P21860 1342 aa20.16■□□□□ 0.82
SUMO1-207ENST00000409498 SPATA31A1Q5TZJ5 1347 aa20.16■□□□□ 0.82
SUMO1-207ENST00000409498 PEAK1Q9H792 1746 aa20.16■□□□□ 0.82
SUMO1-207ENST00000409498 AMPHP49418 695 aa20.15■□□□□ 0.82
SUMO1-207ENST00000409498 LARP1Q6PKG0 1096 aaKnown RBP20.15■□□□□ 0.82
SUMO1-207ENST00000409498 STRN4Q9NRL3 753 aa20.15■□□□□ 0.82
SUMO1-207ENST00000409498 FLT4P35916 1363 aa20.15■□□□□ 0.82
SUMO1-207ENST00000409498 CRB1P82279 1406 aa20.15■□□□□ 0.82
SUMO1-207ENST00000409498 INSRP06213 1382 aa20.14■□□□□ 0.81
SUMO1-207ENST00000409498 DDX10Q13206 875 aaKnown RBP20.14■□□□□ 0.81
SUMO1-207ENST00000409498 THRAP3Q9Y2W1 955 aaKnown RBP20.14■□□□□ 0.81
SUMO1-207ENST00000409498 CC2D1BQ5T0F9 858 aaKnown RBP20.13■□□□□ 0.81
SUMO1-207ENST00000409498 EMILIN1Q9Y6C2 1016 aa20.13■□□□□ 0.81
SUMO1-207ENST00000409498 BARGINQ6ZT62 677 aa20.12■□□□□ 0.81
SUMO1-207ENST00000409498 ILDR2Q71H61 639 aa20.12■□□□□ 0.81
SUMO1-207ENST00000409498 ANKRD24Q8TF21 1146 aa20.12■□□□□ 0.81
SUMO1-207ENST00000409498 CARD10Q9BWT7 1032 aa20.12■□□□□ 0.81
SUMO1-207ENST00000409498 FAM208AQ9UK61 1670 aaKnown RBP20.12■□□□□ 0.81
SUMO1-207ENST00000409498 HSP90AB2PQ58FF8 381 aa20.1■□□□□ 0.81
SUMO1-207ENST00000409498 CCDC9Q9Y3X0 531 aaKnown RBP20.1■□□□□ 0.81
SUMO1-207ENST00000409498 RGS12O14924 1447 aa20.1■□□□□ 0.81
SUMO1-207ENST00000409498 TNNT2P45379 298 aaPredicted RBP20.09■□□□□ 0.81
SUMO1-207ENST00000409498 TOM1L2Q6ZVM7 507 aa20.09■□□□□ 0.81
SUMO1-207ENST00000409498 TCP11L2Q8N4U5 519 aa20.09■□□□□ 0.81
SUMO1-207ENST00000409498 THSD7AQ9UPZ6 1657 aa20.08■□□□□ 0.81
SUMO1-207ENST00000409498 CSB-PGBD3P0DP91 1061 aa20.07■□□□□ 0.8
SUMO1-207ENST00000409498 PARD3Q8TEW0 1356 aa20.06■□□□□ 0.8
SUMO1-207ENST00000409498 FAM98CQ17RN3 349 aaKnown RBP20.05■□□□□ 0.8
SUMO1-207ENST00000409498 CDCA7Q9BWT1 371 aaPredicted RBP20.05■□□□□ 0.8
SUMO1-207ENST00000409498 WNK3Q9BYP7 1800 aa20.04■□□□□ 0.8
SUMO1-207ENST00000409498 DISP2A7MBM2 1401 aa20.04■□□□□ 0.8
SUMO1-207ENST00000409498 SEPT12Q8IYM1 358 aa20.04■□□□□ 0.8
SUMO1-207ENST00000409498 NCAPD2Q15021 1401 aa20.03■□□□□ 0.8
SUMO1-207ENST00000409498 PPM1GO15355 546 aaPredicted RBP20.03■□□□□ 0.8
SUMO1-207ENST00000409498 MTHFSP49914 203 aa20.03■□□□□ 0.8
SUMO1-207ENST00000409498 NLRP2Q9NX02 1062 aa20.03■□□□□ 0.8
SUMO1-207ENST00000409498 USP35Q9P2H5 1018 aa20.03■□□□□ 0.8
SUMO1-207ENST00000409498 PARP4Q9UKK3 1724 aaKnown RBP20.02■□□□□ 0.8
SUMO1-207ENST00000409498 NBPF6Q5VWK0 638 aa20.02■□□□□ 0.8
SUMO1-207ENST00000409498 LTV1Q96GA3 475 aaPredicted RBP20.02■□□□□ 0.8
SUMO1-207ENST00000409498 NBPF4Q96M43 638 aa20.02■□□□□ 0.8
SUMO1-207ENST00000409498 RGPD2P0DJD1 1756 aa20.02■□□□□ 0.8
SUMO1-207ENST00000409498 PPP2R1AP30153 589 aa20.01■□□□□ 0.79
SUMO1-207ENST00000409498 EIF4A2Q14240 407 aaKnown RBP20.01■□□□□ 0.79
SUMO1-207ENST00000409498 RALBP1Q15311 655 aa20.01■□□□□ 0.79
SUMO1-207ENST00000409498 BRWD3Q6RI45 1802 aa20■□□□□ 0.79
SUMO1-207ENST00000409498 IL13P35225 146 aa19.98■□□□□ 0.79
SUMO1-207ENST00000409498 EYA1Q99502 592 aa19.98■□□□□ 0.79
SUMO1-207ENST00000409498 IL2RBP14784 551 aa19.97■□□□□ 0.79
SUMO1-207ENST00000409498 COL3A1P02461 1466 aaPredicted RBP19.97■□□□□ 0.79
SUMO1-207ENST00000409498 CNGB1Q14028 1251 aaPredicted RBP19.96■□□□□ 0.79
SUMO1-207ENST00000409498 KRT27Q7Z3Y8 459 aa19.96■□□□□ 0.79
SUMO1-207ENST00000409498 IGSF1Q8N6C5 1336 aa19.96■□□□□ 0.79
SUMO1-207ENST00000409498 RGPD1P0DJD0 1748 aa19.96■□□□□ 0.79
SUMO1-207ENST00000409498 PLEKHG2Q9H7P9 1386 aa19.95■□□□□ 0.79
SUMO1-207ENST00000409498 LRRC37A3O60309 1634 aa19.95■□□□□ 0.78
SUMO1-207ENST00000409498 DDB1Q16531 1140 aa19.94■□□□□ 0.78
SUMO1-207ENST00000409498 PRKRIP1Q9H875 184 aaPredicted RBP19.94■□□□□ 0.78
SUMO1-207ENST00000409498 DIAPH1O60610 1272 aaKnown RBP19.93■□□□□ 0.78
SUMO1-207ENST00000409498 A0A0G2JS52 829 aa19.92■□□□□ 0.78
SUMO1-207ENST00000409498 EXOC5O00471 708 aa19.92■□□□□ 0.78
SUMO1-207ENST00000409498 MYT1Q01538 1121 aa19.92■□□□□ 0.78
SUMO1-207ENST00000409498 KDRP35968 1356 aa19.92■□□□□ 0.78
SUMO1-207ENST00000409498 OVOS2A0A0G2JMS6 1433 aa19.92■□□□□ 0.78
SUMO1-207ENST00000409498 TNS2Q63HR2 1409 aa19.92■□□□□ 0.78
SUMO1-207ENST00000409498 MEGF6O75095 1541 aa19.92■□□□□ 0.78
SUMO1-207ENST00000409498 USHBP1Q8N6Y0 703 aa19.91■□□□□ 0.78
SUMO1-207ENST00000409498 CFAP53Q96M91 514 aa19.91■□□□□ 0.78
SUMO1-207ENST00000409498 MYBBP1AQ9BQG0 1328 aaKnown RBP19.91■□□□□ 0.78
SUMO1-207ENST00000409498 BCL9O00512 1426 aa19.91■□□□□ 0.78
SUMO1-207ENST00000409498 PDE3BQ13370 1112 aa19.9■□□□□ 0.78
SUMO1-207ENST00000409498 RAPGEF4Q8WZA2 1011 aa19.89■□□□□ 0.77
SUMO1-207ENST00000409498 SOCS7O14512 581 aa19.88■□□□□ 0.77
SUMO1-207ENST00000409498 TATP17735 454 aaPredicted RBP19.88■□□□□ 0.77
SUMO1-207ENST00000409498 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.88■□□□□ 0.77
SUMO1-207ENST00000409498 MARCH10Q8NA82 808 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms