RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 NUTM2EB1AL46 878 aaPredicted RBP20.45■□□□□ 0.86
AP1S3-204ENST00000409375 HOXC9P31274 260 aa20.45■□□□□ 0.86
AP1S3-204ENST00000409375 NUTM2AQ8IVF1 878 aaPredicted RBP20.45■□□□□ 0.86
AP1S3-204ENST00000409375 PEAK1Q9H792 1746 aa20.44■□□□□ 0.86
AP1S3-204ENST00000409375 DIAPH1O60610 1272 aaKnown RBP20.44■□□□□ 0.86
AP1S3-204ENST00000409375 COL14A1Q05707 1796 aaKnown RBP20.44■□□□□ 0.86
AP1S3-204ENST00000409375 WDR43Q15061 677 aaKnown RBP eCLIP20.42■□□□□ 0.86
AP1S3-204ENST00000409375 ADAMTS2O95450 1211 aa20.41■□□□□ 0.86
AP1S3-204ENST00000409375 HSP90AB2PQ58FF8 381 aa20.41■□□□□ 0.86
AP1S3-204ENST00000409375 COL3A1P02461 1466 aaPredicted RBP20.41■□□□□ 0.86
AP1S3-204ENST00000409375 COL18A1P39060 1754 aa20.4■□□□□ 0.86
AP1S3-204ENST00000409375 CHRNA2Q15822 529 aa20.4■□□□□ 0.86
AP1S3-204ENST00000409375 CCDC184Q52MB2 194 aa20.39■□□□□ 0.85
AP1S3-204ENST00000409375 MEX3CQ5U5Q3 659 aaKnown RBP20.39■□□□□ 0.85
AP1S3-204ENST00000409375 LMO7Q8WWI1 1683 aa20.38■□□□□ 0.85
AP1S3-204ENST00000409375 FAM208AQ9UK61 1670 aaKnown RBP20.38■□□□□ 0.85
AP1S3-204ENST00000409375 FAM83GA6ND36 823 aa20.37■□□□□ 0.85
AP1S3-204ENST00000409375 U2SURPO15042 1029 aaKnown RBP20.37■□□□□ 0.85
AP1S3-204ENST00000409375 EIF4A2Q14240 407 aaKnown RBP20.37■□□□□ 0.85
AP1S3-204ENST00000409375 ANKRD24Q8TF21 1146 aa20.37■□□□□ 0.85
AP1S3-204ENST00000409375 RGPD5Q99666 1765 aa20.36■□□□□ 0.85
AP1S3-204ENST00000409375 ERBB3P21860 1342 aa20.36■□□□□ 0.85
AP1S3-204ENST00000409375 CSB-PGBD3P0DP91 1061 aa20.36■□□□□ 0.85
AP1S3-204ENST00000409375 PNISRQ8TF01 805 aaKnown RBP20.36■□□□□ 0.85
AP1S3-204ENST00000409375 NWD2Q9ULI1 1742 aa20.36■□□□□ 0.85
AP1S3-204ENST00000409375 PLCH1Q4KWH8 1693 aa20.35■□□□□ 0.85
AP1S3-204ENST00000409375 IL13P35225 146 aa20.35■□□□□ 0.85
AP1S3-204ENST00000409375 EVA1CP58658 441 aa20.35■□□□□ 0.85
AP1S3-204ENST00000409375 LTV1Q96GA3 475 aaPredicted RBP20.35■□□□□ 0.85
AP1S3-204ENST00000409375 PNNQ9H307 717 aaKnown RBP20.35■□□□□ 0.85
AP1S3-204ENST00000409375 LRP6O75581 1613 aa20.35■□□□□ 0.85
AP1S3-204ENST00000409375 U2AF1L5P0DN76 240 aaPredicted RBP20.34■□□□□ 0.85
AP1S3-204ENST00000409375 U2AF1Q01081 240 aaKnown RBP eCLIP20.34■□□□□ 0.85
AP1S3-204ENST00000409375 NGLY1Q96IV0 654 aa20.34■□□□□ 0.85
AP1S3-204ENST00000409375 BTG4Q9NY30 223 aa20.34■□□□□ 0.85
AP1S3-204ENST00000409375 AXIN2Q9Y2T1 843 aa20.34■□□□□ 0.85
AP1S3-204ENST00000409375 CAMTA1Q9Y6Y1 1673 aa20.34■□□□□ 0.85
AP1S3-204ENST00000409375 COL5A2P05997 1499 aaPredicted RBP20.33■□□□□ 0.85
AP1S3-204ENST00000409375 FAM9BQ8IZU0 186 aa20.33■□□□□ 0.85
AP1S3-204ENST00000409375 C8orf37Q96NL8 207 aa20.33■□□□□ 0.85
AP1S3-204ENST00000409375 NEFMP07197 916 aa20.32■□□□□ 0.84
AP1S3-204ENST00000409375 WDR17Q8IZU2 1322 aa20.31■□□□□ 0.84
AP1S3-204ENST00000409375 STRN4Q9NRL3 753 aa20.3■□□□□ 0.84
AP1S3-204ENST00000409375 NLRP2Q9NX02 1062 aa20.3■□□□□ 0.84
AP1S3-204ENST00000409375 SLIT2O94813 1529 aa20.3■□□□□ 0.84
AP1S3-204ENST00000409375 RGPD1P0DJD0 1748 aa20.3■□□□□ 0.84
AP1S3-204ENST00000409375 IGSF1Q8N6C5 1336 aa20.29■□□□□ 0.84
AP1S3-204ENST00000409375 FCHSD2O94868 740 aa20.29■□□□□ 0.84
AP1S3-204ENST00000409375 TOM1L2Q6ZVM7 507 aa20.29■□□□□ 0.84
AP1S3-204ENST00000409375 EYA1Q99502 592 aa20.29■□□□□ 0.84
AP1S3-204ENST00000409375 FNBP4Q8N3X1 1017 aaPredicted RBP20.28■□□□□ 0.84
AP1S3-204ENST00000409375 ADAMTS8Q9UP79 889 aa20.28■□□□□ 0.84
AP1S3-204ENST00000409375 CRB1P82279 1406 aa20.27■□□□□ 0.84
AP1S3-204ENST00000409375 NRAPQ86VF7 1730 aa20.27■□□□□ 0.84
AP1S3-204ENST00000409375 SULT6B1Q6IMI4 303 aa20.26■□□□□ 0.83
AP1S3-204ENST00000409375 UNC5CLQ8IV45 518 aa20.26■□□□□ 0.83
AP1S3-204ENST00000409375 CARD10Q9BWT7 1032 aa20.26■□□□□ 0.83
AP1S3-204ENST00000409375 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.26■□□□□ 0.83
AP1S3-204ENST00000409375 KDRP35968 1356 aa20.25■□□□□ 0.83
AP1S3-204ENST00000409375 NBPF6Q5VWK0 638 aa20.25■□□□□ 0.83
AP1S3-204ENST00000409375 NBPF4Q96M43 638 aa20.25■□□□□ 0.83
AP1S3-204ENST00000409375 USP21Q9UK80 565 aa20.25■□□□□ 0.83
AP1S3-204ENST00000409375 RGPD2P0DJD1 1756 aa20.25■□□□□ 0.83
AP1S3-204ENST00000409375 MAPK8IP3Q9UPT6 1336 aa20.25■□□□□ 0.83
AP1S3-204ENST00000409375 HMOX1P09601 288 aa20.24■□□□□ 0.83
AP1S3-204ENST00000409375 NCAPD2Q15021 1401 aa20.24■□□□□ 0.83
AP1S3-204ENST00000409375 PLEKHG2Q9H7P9 1386 aa20.23■□□□□ 0.83
AP1S3-204ENST00000409375 LARP1Q6PKG0 1096 aaKnown RBP20.23■□□□□ 0.83
AP1S3-204ENST00000409375 AFF2P51816 1311 aa20.23■□□□□ 0.83
AP1S3-204ENST00000409375 PRKAR2BP31323 418 aa20.22■□□□□ 0.83
AP1S3-204ENST00000409375 RAPGEF4Q8WZA2 1011 aa20.22■□□□□ 0.83
AP1S3-204ENST00000409375 RUNDC1Q96C34 613 aa20.22■□□□□ 0.83
AP1S3-204ENST00000409375 RSPH6AQ9H0K4 717 aa20.22■□□□□ 0.83
AP1S3-204ENST00000409375 CCDC9Q9Y3X0 531 aaKnown RBP20.22■□□□□ 0.83
AP1S3-204ENST00000409375 VPS72Q15906 364 aa20.21■□□□□ 0.83
AP1S3-204ENST00000409375 USHBP1Q8N6Y0 703 aa20.21■□□□□ 0.83
AP1S3-204ENST00000409375 THRAP3Q9Y2W1 955 aaKnown RBP20.21■□□□□ 0.83
AP1S3-204ENST00000409375 BCL9LQ86UU0 1499 aa20.2■□□□□ 0.82
AP1S3-204ENST00000409375 TATP17735 454 aaPredicted RBP20.19■□□□□ 0.82
AP1S3-204ENST00000409375 ZNF772Q68DY9 489 aaPredicted RBP20.19■□□□□ 0.82
AP1S3-204ENST00000409375 AEBP1Q8IUX7 1158 aa20.19■□□□□ 0.82
AP1S3-204ENST00000409375 TCP11L2Q8N4U5 519 aa20.18■□□□□ 0.82
AP1S3-204ENST00000409375 CDCA7Q9BWT1 371 aaPredicted RBP20.18■□□□□ 0.82
AP1S3-204ENST00000409375 TRPC5Q9UL62 973 aaPredicted RBP20.18■□□□□ 0.82
AP1S3-204ENST00000409375 PARP4Q9UKK3 1724 aaKnown RBP20.18■□□□□ 0.82
AP1S3-204ENST00000409375 IL2RBP14784 551 aa20.17■□□□□ 0.82
AP1S3-204ENST00000409375 AMOTQ4VCS5 1084 aa20.17■□□□□ 0.82
AP1S3-204ENST00000409375 CCDC146Q8IYE0 955 aa20.17■□□□□ 0.82
AP1S3-204ENST00000409375 NGEFQ8N5V2 710 aa20.17■□□□□ 0.82
AP1S3-204ENST00000409375 USP35Q9P2H5 1018 aa20.17■□□□□ 0.82
AP1S3-204ENST00000409375 SPATA31A1Q5TZJ5 1347 aa20.17■□□□□ 0.82
AP1S3-204ENST00000409375 SPATA31A5Q5VU36 1347 aa20.17■□□□□ 0.82
AP1S3-204ENST00000409375 SPATA31A7Q8IWB4 1347 aa20.17■□□□□ 0.82
AP1S3-204ENST00000409375 ILDR1Q86SU0 546 aaPredicted RBP20.16■□□□□ 0.82
AP1S3-204ENST00000409375 PLEKHF1Q96S99 279 aa20.16■□□□□ 0.82
AP1S3-204ENST00000409375 PLEKHO1Q53GL0 409 aaPredicted RBP20.15■□□□□ 0.82
AP1S3-204ENST00000409375 ATRNO75882 1429 aa20.14■□□□□ 0.81
AP1S3-204ENST00000409375 GAS2L2Q8NHY3 880 aa20.14■□□□□ 0.81
AP1S3-204ENST00000409375 PHF23Q9BUL5 403 aaPredicted RBP20.14■□□□□ 0.81
AP1S3-204ENST00000409375 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms