RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 MSL1Q68DK7 614 aa16.24■□□□□ 0.19
AFF3-202ENST00000409236 SFPQP23246 707 aaKnown RBP eCLIP16.24■□□□□ 0.19
AFF3-202ENST00000409236 TRIM22Q8IYM9 498 aa16.24■□□□□ 0.19
AFF3-202ENST00000409236 ME1P48163 572 aa16.24■□□□□ 0.19
AFF3-202ENST00000409236 UBE4AQ14139 1066 aa16.24■□□□□ 0.19
AFF3-202ENST00000409236 SOGA3Q5TF21 947 aa16.24■□□□□ 0.19
AFF3-202ENST00000409236 GSTTP1A0A1W2PQM5 241 aa16.24■□□□□ 0.19
AFF3-202ENST00000409236 CEP83Q9Y592 693 aa16.24■□□□□ 0.19
AFF3-202ENST00000409236 CCDC27Q2M243 656 aa16.23■□□□□ 0.19
AFF3-202ENST00000409236 PAIP2Q9BPZ3 127 aaKnown RBP16.23■□□□□ 0.19
AFF3-202ENST00000409236 CEP112Q8N8E3 955 aa16.23■□□□□ 0.19
AFF3-202ENST00000409236 GOLGA6L9A6NEM1 432 aa16.23■□□□□ 0.19
AFF3-202ENST00000409236 FIBPO43427 364 aa16.23■□□□□ 0.19
AFF3-202ENST00000409236 UBE2Q2Q8WVN8 375 aa16.23■□□□□ 0.19
AFF3-202ENST00000409236 ZFYP08048 801 aaPredicted RBP16.22■□□□□ 0.19
AFF3-202ENST00000409236 DYNC1I1O14576 645 aa16.21■□□□□ 0.19
AFF3-202ENST00000409236 UPF3BQ9BZI7 483 aaKnown RBP16.21■□□□□ 0.19
AFF3-202ENST00000409236 GOPCQ9HD26 462 aa16.21■□□□□ 0.19
AFF3-202ENST00000409236 TBC1D2BQ9UPU7 963 aa16.21■□□□□ 0.19
AFF3-202ENST00000409236 SMARCC1Q92922 1105 aaPredicted RBP16.21■□□□□ 0.19
AFF3-202ENST00000409236 GTPBP4Q9BZE4 634 aaKnown RBP16.21■□□□□ 0.19
AFF3-202ENST00000409236 ALS2CR12Q96Q35 445 aa16.21■□□□□ 0.19
AFF3-202ENST00000409236 BMP2KQ9NSY1 1161 aaPredicted RBP16.21■□□□□ 0.19
AFF3-202ENST00000409236 NEMFO60524 1076 aa16.21■□□□□ 0.18
AFF3-202ENST00000409236 TEFQ10587 303 aa16.21■□□□□ 0.18
AFF3-202ENST00000409236 COG6Q9Y2V7 657 aa16.21■□□□□ 0.18
AFF3-202ENST00000409236 TNNT1P13805 278 aa16.2■□□□□ 0.18
AFF3-202ENST00000409236 PKD2Q13563 968 aa16.2■□□□□ 0.18
AFF3-202ENST00000409236 EXOC6Q8TAG9 804 aa16.2■□□□□ 0.18
AFF3-202ENST00000409236 FSD2A1L4K1 749 aa16.2■□□□□ 0.18
AFF3-202ENST00000409236 VPS8Q8N3P4 1428 aa16.2■□□□□ 0.18
AFF3-202ENST00000409236 CCDC160A6NGH7 325 aa16.2■□□□□ 0.18
AFF3-202ENST00000409236 TDO2P48775 406 aa16.2■□□□□ 0.18
AFF3-202ENST00000409236 FAM184BQ9ULE4 1060 aa16.2■□□□□ 0.18
AFF3-202ENST00000409236 RSRC1Q96IZ7 334 aaKnown RBP16.2■□□□□ 0.18
AFF3-202ENST00000409236 IKQ13123 557 aaPredicted RBP16.19■□□□□ 0.18
AFF3-202ENST00000409236 RAB3GAP2Q9H2M9 1393 aa16.19■□□□□ 0.18
AFF3-202ENST00000409236 DNAJC21Q5F1R6 531 aaKnown RBP16.19■□□□□ 0.18
AFF3-202ENST00000409236 MCM5P33992 734 aa16.19■□□□□ 0.18
AFF3-202ENST00000409236 EIF5P55010 431 aaKnown RBP16.19■□□□□ 0.18
AFF3-202ENST00000409236 STMN4Q9H169 189 aaPredicted RBP16.19■□□□□ 0.18
AFF3-202ENST00000409236 CBX1P83916 185 aa16.18■□□□□ 0.18
AFF3-202ENST00000409236 MIPOL1Q8TD10 442 aa16.18■□□□□ 0.18
AFF3-202ENST00000409236 SUDS3Q9H7L9 328 aaPredicted RBP16.18■□□□□ 0.18
AFF3-202ENST00000409236 CIZ1Q9ULV3 898 aaPredicted RBP16.18■□□□□ 0.18
AFF3-202ENST00000409236 TSNARE1Q96NA8 513 aa16.18■□□□□ 0.18
AFF3-202ENST00000409236 NOL7Q9UMY1 257 aaKnown RBP16.18■□□□□ 0.18
AFF3-202ENST00000409236 EHBP1Q8NDI1 1231 aa16.18■□□□□ 0.18
AFF3-202ENST00000409236 ANAPC4Q9UJX5 808 aa16.18■□□□□ 0.18
AFF3-202ENST00000409236 PRDM2Q13029 1718 aa16.17■□□□□ 0.18
AFF3-202ENST00000409236 FGFR1OPO95684 399 aaKnown RBP16.17■□□□□ 0.18
AFF3-202ENST00000409236 FBF1Q8TES7 1133 aa16.17■□□□□ 0.18
AFF3-202ENST00000409236 VGFO15240 615 aaPredicted RBP16.17■□□□□ 0.18
AFF3-202ENST00000409236 NUP155O75694 1391 aa16.17■□□□□ 0.18
AFF3-202ENST00000409236 NBPF1Q3BBV0 1214 aa16.17■□□□□ 0.18
AFF3-202ENST00000409236 CEP131Q9UPN4 1083 aa16.17■□□□□ 0.18
AFF3-202ENST00000409236 IKBKGQ9Y6K9 419 aa16.17■□□□□ 0.18
AFF3-202ENST00000409236 CCDC18Q5T9S5 1454 aa16.17■□□□□ 0.18
AFF3-202ENST00000409236 WASHC4Q2M389 1173 aa16.17■□□□□ 0.18
AFF3-202ENST00000409236 CCDC57Q2TAC2 916 aa16.17■□□□□ 0.18
AFF3-202ENST00000409236 NGDNQ8NEJ9 315 aaKnown RBP16.17■□□□□ 0.18
AFF3-202ENST00000409236 NUP62CLQ9H1M0 184 aa16.17■□□□□ 0.18
AFF3-202ENST00000409236 PLIN1O60240 522 aa16.16■□□□□ 0.18
AFF3-202ENST00000409236 FERMT1Q9BQL6 677 aa16.16■□□□□ 0.18
AFF3-202ENST00000409236 COG3Q96JB2 828 aa16.16■□□□□ 0.18
AFF3-202ENST00000409236 SARNPP82979 210 aaKnown RBP16.16■□□□□ 0.18
AFF3-202ENST00000409236 GTF2F1P35269 517 aaKnown RBP eCLIP16.15■□□□□ 0.18
AFF3-202ENST00000409236 PRDM10Q9NQV6 1147 aa16.15■□□□□ 0.18
AFF3-202ENST00000409236 MKRN1Q9UHC7 482 aaKnown RBP16.15■□□□□ 0.18
AFF3-202ENST00000409236 CCDC178Q5BJE1 867 aa16.15■□□□□ 0.18
AFF3-202ENST00000409236 TTC14Q96N46 770 aa16.15■□□□□ 0.18
AFF3-202ENST00000409236 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.15■□□□□ 0.18
AFF3-202ENST00000409236 MAP3K11Q16584 847 aa16.15■□□□□ 0.18
AFF3-202ENST00000409236 BCL2L13Q9BXK5 485 aa16.15■□□□□ 0.18
AFF3-202ENST00000409236 RBM28Q9NW13 759 aaKnown RBP16.15■□□□□ 0.18
AFF3-202ENST00000409236 PLEKHH1Q9ULM0 1364 aa16.15■□□□□ 0.18
AFF3-202ENST00000409236 RRBP1Q9P2E9 1410 aaKnown RBP16.15■□□□□ 0.18
AFF3-202ENST00000409236 SPATA32Q96LK8 384 aa16.15■□□□□ 0.18
AFF3-202ENST00000409236 CCDC150Q8NCX0 1101 aa16.15■□□□□ 0.18
AFF3-202ENST00000409236 CYP46A1Q9Y6A2 500 aa16.15■□□□□ 0.18
AFF3-202ENST00000409236 CCDC144AA2RUR9 1427 aa16.15■□□□□ 0.18
AFF3-202ENST00000409236 PAFAH1B1P43034 410 aa16.14■□□□□ 0.18
AFF3-202ENST00000409236 FSD1Q9BTV5 496 aa16.14■□□□□ 0.18
AFF3-202ENST00000409236 HOMER2Q9NSB8 354 aa16.14■□□□□ 0.18
AFF3-202ENST00000409236 PAXBP1Q9Y5B6 917 aa16.14■□□□□ 0.18
AFF3-202ENST00000409236 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.14■□□□□ 0.17
AFF3-202ENST00000409236 IL27Q8NEV9 243 aa16.14■□□□□ 0.17
AFF3-202ENST00000409236 RAB3IL1Q8TBN0 382 aa16.14■□□□□ 0.17
AFF3-202ENST00000409236 GSDMDP57764 484 aa16.14■□□□□ 0.17
AFF3-202ENST00000409236 RNF168Q8IYW5 571 aaPredicted RBP16.14■□□□□ 0.17
AFF3-202ENST00000409236 RRP7AQ9Y3A4 280 aaKnown RBP16.14■□□□□ 0.17
AFF3-202ENST00000409236 USO1O60763 962 aaKnown RBP16.14■□□□□ 0.17
AFF3-202ENST00000409236 IBSPP21815 317 aaPredicted RBP16.14■□□□□ 0.17
AFF3-202ENST00000409236 FKBP15Q5T1M5 1219 aa16.14■□□□□ 0.17
AFF3-202ENST00000409236 WASF1Q92558 559 aa16.14■□□□□ 0.17
AFF3-202ENST00000409236 TACC1O75410 805 aa16.14■□□□□ 0.17
AFF3-202ENST00000409236 NEK4P51957 841 aa16.14■□□□□ 0.17
AFF3-202ENST00000409236 CCDC158Q5M9N0 1113 aa16.14■□□□□ 0.17
AFF3-202ENST00000409236 PPP4R3BQ5MIZ7 849 aa16.14■□□□□ 0.17
AFF3-202ENST00000409236 KRT222Q8N1A0 295 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms