RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 ZNF692Q9BU19 519 aaPredicted RBP13.62□□□□□ -0.23
NIF3L1-202ENST00000409020 AXIN2Q9Y2T1 843 aa13.62□□□□□ -0.23
NIF3L1-202ENST00000409020 A0A1W2PP64 1363 aa13.61□□□□□ -0.23
NIF3L1-202ENST00000409020 NME9Q86XW9 330 aa13.6□□□□□ -0.23
NIF3L1-202ENST00000409020 NFAT5O94916 1531 aa13.6□□□□□ -0.23
NIF3L1-202ENST00000409020 COL18A1P39060 1754 aa13.6□□□□□ -0.23
NIF3L1-202ENST00000409020 CCDC125Q86Z20 511 aa13.59□□□□□ -0.23
NIF3L1-202ENST00000409020 TTC21AQ8NDW8 1320 aa13.59□□□□□ -0.23
NIF3L1-202ENST00000409020 AATKQ6ZMQ8 1374 aa13.59□□□□□ -0.23
NIF3L1-202ENST00000409020 ARHGEF25Q86VW2 580 aa13.59□□□□□ -0.23
NIF3L1-202ENST00000409020 USP47Q96K76 1375 aa13.59□□□□□ -0.23
NIF3L1-202ENST00000409020 ANP32EQ9BTT0 268 aa13.59□□□□□ -0.23
NIF3L1-202ENST00000409020 BARGINQ6ZT62 677 aa13.57□□□□□ -0.24
NIF3L1-202ENST00000409020 TCP11L2Q8N4U5 519 aa13.57□□□□□ -0.24
NIF3L1-202ENST00000409020 CRB1P82279 1406 aa13.56□□□□□ -0.24
NIF3L1-202ENST00000409020 EDC4Q6P2E9 1401 aaKnown RBP13.55□□□□□ -0.24
NIF3L1-202ENST00000409020 USP31Q70CQ4 1352 aa13.55□□□□□ -0.24
NIF3L1-202ENST00000409020 HDGFL2Q7Z4V5 671 aaPredicted RBP13.55□□□□□ -0.24
NIF3L1-202ENST00000409020 KCNH5Q8NCM2 988 aa13.55□□□□□ -0.24
NIF3L1-202ENST00000409020 RGPD5Q99666 1765 aa13.54□□□□□ -0.24
NIF3L1-202ENST00000409020 EN1Q05925 392 aaPredicted RBP13.54□□□□□ -0.24
NIF3L1-202ENST00000409020 SF3B2Q13435 895 aaKnown RBP13.54□□□□□ -0.24
NIF3L1-202ENST00000409020 USP54Q70EL1 1684 aa13.54□□□□□ -0.24
NIF3L1-202ENST00000409020 TNS1Q9HBL0 1735 aaKnown RBP13.54□□□□□ -0.24
NIF3L1-202ENST00000409020 WDR17Q8IZU2 1322 aa13.54□□□□□ -0.24
NIF3L1-202ENST00000409020 TRIM37O94972 964 aa13.53□□□□□ -0.24
NIF3L1-202ENST00000409020 TOM1L2Q6ZVM7 507 aa13.53□□□□□ -0.24
NIF3L1-202ENST00000409020 PUS7Q96PZ0 661 aaKnown RBP13.53□□□□□ -0.24
NIF3L1-202ENST00000409020 TERF2IPQ9NYB0 399 aa13.53□□□□□ -0.24
NIF3L1-202ENST00000409020 OVOS2A0A0J9YW53 1432 aa13.53□□□□□ -0.24
NIF3L1-202ENST00000409020 OVOS2Q6IE36 1432 aa13.53□□□□□ -0.24
NIF3L1-202ENST00000409020 FBLN1P23142 703 aa13.53□□□□□ -0.24
NIF3L1-202ENST00000409020 ZEB1P37275 1124 aaPredicted RBP13.53□□□□□ -0.24
NIF3L1-202ENST00000409020 THRAP3Q9Y2W1 955 aaKnown RBP13.53□□□□□ -0.24
NIF3L1-202ENST00000409020 LRRC37A3O60309 1634 aa13.52□□□□□ -0.24
NIF3L1-202ENST00000409020 PARP4Q9UKK3 1724 aaKnown RBP13.52□□□□□ -0.25
NIF3L1-202ENST00000409020 PDE3BQ13370 1112 aa13.52□□□□□ -0.25
NIF3L1-202ENST00000409020 RGPD1P0DJD0 1748 aa13.51□□□□□ -0.25
NIF3L1-202ENST00000409020 CLSPNQ9HAW4 1339 aa13.51□□□□□ -0.25
NIF3L1-202ENST00000409020 UTRNP46939 3433 aa13.51□□□□□ -0.25
NIF3L1-202ENST00000409020 CSB-PGBD3P0DP91 1061 aa13.5□□□□□ -0.25
NIF3L1-202ENST00000409020 BAG6P46379 1132 aa13.5□□□□□ -0.25
NIF3L1-202ENST00000409020 TMF1P82094 1093 aa13.5□□□□□ -0.25
NIF3L1-202ENST00000409020 FAM196AQ6ZSG2 479 aa13.5□□□□□ -0.25
NIF3L1-202ENST00000409020 EZH2Q15910 746 aaKnown RBP13.5□□□□□ -0.25
NIF3L1-202ENST00000409020 CCER1Q8TC90 406 aaPredicted RBP13.5□□□□□ -0.25
NIF3L1-202ENST00000409020 NINLQ9Y2I6 1382 aa13.5□□□□□ -0.25
NIF3L1-202ENST00000409020 LTN1O94822 1766 aa13.49□□□□□ -0.25
NIF3L1-202ENST00000409020 WNK3Q9BYP7 1800 aa13.49□□□□□ -0.25
NIF3L1-202ENST00000409020 ANKRD36BQ8N2N9 1353 aa13.49□□□□□ -0.25
NIF3L1-202ENST00000409020 PSDA5PKW4 1024 aaPredicted RBP13.49□□□□□ -0.25
NIF3L1-202ENST00000409020 PTF1AQ7RTS3 328 aa13.49□□□□□ -0.25
NIF3L1-202ENST00000409020 TIMELESSQ9UNS1 1208 aa13.49□□□□□ -0.25
NIF3L1-202ENST00000409020 PEAK1Q9H792 1746 aa13.49□□□□□ -0.25
NIF3L1-202ENST00000409020 DISP2A7MBM2 1401 aa13.49□□□□□ -0.25
NIF3L1-202ENST00000409020 CARD10Q9BWT7 1032 aa13.48□□□□□ -0.25
NIF3L1-202ENST00000409020 ERBB3P21860 1342 aa13.48□□□□□ -0.25
NIF3L1-202ENST00000409020 DDB1Q16531 1140 aa13.47□□□□□ -0.25
NIF3L1-202ENST00000409020 MARCH10Q8NA82 808 aaPredicted RBP13.47□□□□□ -0.25
NIF3L1-202ENST00000409020 ABCC6O95255 1503 aa13.47□□□□□ -0.25
NIF3L1-202ENST00000409020 MYOM1P52179 1685 aa13.47□□□□□ -0.25
NIF3L1-202ENST00000409020 APBA3O96018 575 aa13.47□□□□□ -0.25
NIF3L1-202ENST00000409020 MYCNP04198 464 aaPredicted RBP13.47□□□□□ -0.25
NIF3L1-202ENST00000409020 ANKRD24Q8TF21 1146 aa13.47□□□□□ -0.25
NIF3L1-202ENST00000409020 CAMKK2Q96RR4 588 aa13.47□□□□□ -0.25
NIF3L1-202ENST00000409020 GGNBP2Q9H3C7 697 aa13.47□□□□□ -0.25
NIF3L1-202ENST00000409020 OVOS2A0A0G2JMS6 1433 aa13.45□□□□□ -0.26
NIF3L1-202ENST00000409020 FYB1O15117 783 aa13.45□□□□□ -0.26
NIF3L1-202ENST00000409020 COG3Q96JB2 828 aa13.45□□□□□ -0.26
NIF3L1-202ENST00000409020 CARD14Q9BXL6 1004 aa13.45□□□□□ -0.26
NIF3L1-202ENST00000409020 NLRP2Q9NX02 1062 aa13.45□□□□□ -0.26
NIF3L1-202ENST00000409020 MAP3K19Q56UN5 1328 aa13.45□□□□□ -0.26
NIF3L1-202ENST00000409020 DCAF8L1A6NGE4 600 aa13.44□□□□□ -0.26
NIF3L1-202ENST00000409020 LTV1Q96GA3 475 aaPredicted RBP13.44□□□□□ -0.26
NIF3L1-202ENST00000409020 GOLGB1Q14789 3259 aaKnown RBP13.44□□□□□ -0.26
NIF3L1-202ENST00000409020 RRS1Q15050 365 aaKnown RBP13.44□□□□□ -0.26
NIF3L1-202ENST00000409020 R3HDM1Q15032 1099 aaKnown RBP13.43□□□□□ -0.26
NIF3L1-202ENST00000409020 IP6K1Q92551 441 aa13.43□□□□□ -0.26
NIF3L1-202ENST00000409020 CCDC7Q96M83 1385 aa13.43□□□□□ -0.26
NIF3L1-202ENST00000409020 TNS2Q63HR2 1409 aa13.42□□□□□ -0.26
NIF3L1-202ENST00000409020 HOXC9P31274 260 aa13.42□□□□□ -0.26
NIF3L1-202ENST00000409020 UBE2Q2Q8WVN8 375 aa13.42□□□□□ -0.26
NIF3L1-202ENST00000409020 GTF3C3Q9Y5Q9 886 aa13.42□□□□□ -0.26
NIF3L1-202ENST00000409020 NSD3Q9BZ95 1437 aa13.42□□□□□ -0.26
NIF3L1-202ENST00000409020 RREB1Q92766 1687 aa13.41□□□□□ -0.26
NIF3L1-202ENST00000409020 HSPA5P11021 654 aaKnown RBP13.41□□□□□ -0.26
NIF3L1-202ENST00000409020 POLR3GLQ9BT43 218 aa13.41□□□□□ -0.26
NIF3L1-202ENST00000409020 CDCA7Q9BWT1 371 aaPredicted RBP13.41□□□□□ -0.26
NIF3L1-202ENST00000409020 SBF2Q86WG5 1849 aa13.41□□□□□ -0.26
NIF3L1-202ENST00000409020 EXOC5O00471 708 aa13.4□□□□□ -0.26
NIF3L1-202ENST00000409020 CDCA8Q53HL2 280 aa13.4□□□□□ -0.26
NIF3L1-202ENST00000409020 NUP188Q5SRE5 1749 aa13.4□□□□□ -0.26
NIF3L1-202ENST00000409020 KIF20BQ96Q89 1820 aa13.39□□□□□ -0.27
NIF3L1-202ENST00000409020 KCNQ2O43526 872 aa13.39□□□□□ -0.27
NIF3L1-202ENST00000409020 IL2RBP14784 551 aa13.39□□□□□ -0.27
NIF3L1-202ENST00000409020 C11orf95C9JLR9 678 aaPredicted RBP13.38□□□□□ -0.27
NIF3L1-202ENST00000409020 AMPHP49418 695 aa13.38□□□□□ -0.27
NIF3L1-202ENST00000409020 BCL11BQ9C0K0 894 aaPredicted RBP13.38□□□□□ -0.27
NIF3L1-202ENST00000409020 FAM208AQ9UK61 1670 aaKnown RBP13.38□□□□□ -0.27
NIF3L1-202ENST00000409020 BCL9O00512 1426 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms