RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 OVOS2A0A0G2JMS6 1433 aa17.99■□□□□ 0.47
SNORD88B-201ENST00000408454 OVOS2A0A0J9YW53 1432 aa17.99■□□□□ 0.47
SNORD88B-201ENST00000408454 OVOS2Q6IE36 1432 aa17.99■□□□□ 0.47
SNORD88B-201ENST00000408454 DDB1Q16531 1140 aa17.99■□□□□ 0.47
SNORD88B-201ENST00000408454 ARHGEF25Q86VW2 580 aa17.99■□□□□ 0.47
SNORD88B-201ENST00000408454 NBPF14Q5TI25 921 aa17.98■□□□□ 0.47
SNORD88B-201ENST00000408454 MON2Q7Z3U7 1717 aa17.98■□□□□ 0.47
SNORD88B-201ENST00000408454 DEFB132Q7Z7B7 95 aa17.97■□□□□ 0.47
SNORD88B-201ENST00000408454 CARD10Q9BWT7 1032 aa17.97■□□□□ 0.47
SNORD88B-201ENST00000408454 PARP4Q9UKK3 1724 aaKnown RBP17.95■□□□□ 0.46
SNORD88B-201ENST00000408454 APBA3O96018 575 aa17.95■□□□□ 0.46
SNORD88B-201ENST00000408454 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.95■□□□□ 0.46
SNORD88B-201ENST00000408454 COG3Q96JB2 828 aa17.94■□□□□ 0.46
SNORD88B-201ENST00000408454 ST20-MTHFSA0A0A6YYL1 179 aa17.93■□□□□ 0.46
SNORD88B-201ENST00000408454 TRIM37O94972 964 aa17.93■□□□□ 0.46
SNORD88B-201ENST00000408454 HMGB2P26583 209 aaKnown RBP17.93■□□□□ 0.46
SNORD88B-201ENST00000408454 USP54Q70EL1 1684 aa17.93■□□□□ 0.46
SNORD88B-201ENST00000408454 USP47Q96K76 1375 aa17.92■□□□□ 0.46
SNORD88B-201ENST00000408454 EXOC5O00471 708 aa17.92■□□□□ 0.46
SNORD88B-201ENST00000408454 SOX12O15370 315 aa17.92■□□□□ 0.46
SNORD88B-201ENST00000408454 EN1Q05925 392 aaPredicted RBP17.92■□□□□ 0.46
SNORD88B-201ENST00000408454 A0A1W2PP64 1363 aa17.91■□□□□ 0.46
SNORD88B-201ENST00000408454 ANKRD36BQ8N2N9 1353 aa17.91■□□□□ 0.46
SNORD88B-201ENST00000408454 BCL9O00512 1426 aa17.9■□□□□ 0.46
SNORD88B-201ENST00000408454 NFAT5O94916 1531 aa17.9■□□□□ 0.46
SNORD88B-201ENST00000408454 SLC12A5Q9H2X9 1139 aa17.9■□□□□ 0.46
SNORD88B-201ENST00000408454 ERBB3P21860 1342 aa17.88■□□□□ 0.45
SNORD88B-201ENST00000408454 SMG6Q86US8 1419 aaKnown RBP17.88■□□□□ 0.45
SNORD88B-201ENST00000408454 TNS1Q9HBL0 1735 aaKnown RBP17.87■□□□□ 0.45
SNORD88B-201ENST00000408454 EP400Q96L91 3159 aa17.87■□□□□ 0.45
SNORD88B-201ENST00000408454 PLSCR1O15162 318 aa17.87■□□□□ 0.45
SNORD88B-201ENST00000408454 FAM182BQ5T319 152 aa17.87■□□□□ 0.45
SNORD88B-201ENST00000408454 NME9Q86XW9 330 aa17.87■□□□□ 0.45
SNORD88B-201ENST00000408454 TESK2Q96S53 571 aa17.87■□□□□ 0.45
SNORD88B-201ENST00000408454 BCL11BQ9C0K0 894 aaPredicted RBP17.87■□□□□ 0.45
SNORD88B-201ENST00000408454 NLRP2Q9NX02 1062 aa17.87■□□□□ 0.45
SNORD88B-201ENST00000408454 LRP5O75197 1615 aa17.87■□□□□ 0.45
SNORD88B-201ENST00000408454 CAMKK2Q96RR4 588 aa17.86■□□□□ 0.45
SNORD88B-201ENST00000408454 RTL1A6NKG5 1358 aa17.86■□□□□ 0.45
SNORD88B-201ENST00000408454 CD163L1Q9NR16 1453 aa17.86■□□□□ 0.45
SNORD88B-201ENST00000408454 COL18A1P39060 1754 aa17.86■□□□□ 0.45
SNORD88B-201ENST00000408454 IL2RBP14784 551 aa17.85■□□□□ 0.45
SNORD88B-201ENST00000408454 TNS2Q63HR2 1409 aa17.85■□□□□ 0.45
SNORD88B-201ENST00000408454 FAM208AQ9UK61 1670 aaKnown RBP17.85■□□□□ 0.45
SNORD88B-201ENST00000408454 RGPD3A6NKT7 1758 aaPredicted RBP17.84■□□□□ 0.45
SNORD88B-201ENST00000408454 RGPD4Q7Z3J3 1758 aa17.84■□□□□ 0.45
SNORD88B-201ENST00000408454 LRRC37A3O60309 1634 aa17.84■□□□□ 0.45
SNORD88B-201ENST00000408454 KIF24Q5T7B8 1368 aa17.84■□□□□ 0.45
SNORD88B-201ENST00000408454 AMPHP49418 695 aa17.84■□□□□ 0.45
SNORD88B-201ENST00000408454 EZH2Q15910 746 aaKnown RBP17.84■□□□□ 0.45
SNORD88B-201ENST00000408454 IP6K1Q92551 441 aa17.84■□□□□ 0.45
SNORD88B-201ENST00000408454 PCGF6Q9BYE7 350 aa17.84■□□□□ 0.45
SNORD88B-201ENST00000408454 AXIN2Q9Y2T1 843 aa17.84■□□□□ 0.45
SNORD88B-201ENST00000408454 ANKRD24Q8TF21 1146 aa17.83■□□□□ 0.44
SNORD88B-201ENST00000408454 DCAF8L1A6NGE4 600 aa17.82■□□□□ 0.44
SNORD88B-201ENST00000408454 WNK3Q9BYP7 1800 aa17.82■□□□□ 0.44
SNORD88B-201ENST00000408454 CGNL1Q0VF96 1302 aa17.81■□□□□ 0.44
SNORD88B-201ENST00000408454 R3HDM1Q15032 1099 aaKnown RBP17.81■□□□□ 0.44
SNORD88B-201ENST00000408454 CCER1Q8TC90 406 aaPredicted RBP17.8■□□□□ 0.44
SNORD88B-201ENST00000408454 LTN1O94822 1766 aa17.79■□□□□ 0.44
SNORD88B-201ENST00000408454 PSDA5PKW4 1024 aaPredicted RBP17.79■□□□□ 0.44
SNORD88B-201ENST00000408454 EIF4G2P78344 907 aaKnown RBP eCLIP17.77■□□□□ 0.44
SNORD88B-201ENST00000408454 RREB1Q92766 1687 aa17.77■□□□□ 0.43
SNORD88B-201ENST00000408454 PEAK1Q9H792 1746 aa17.76■□□□□ 0.43
SNORD88B-201ENST00000408454 MARCH10Q8NA82 808 aaPredicted RBP17.76■□□□□ 0.43
SNORD88B-201ENST00000408454 SPON1Q9HCB6 807 aa17.76■□□□□ 0.43
SNORD88B-201ENST00000408454 RAPGEF4Q8WZA2 1011 aa17.75■□□□□ 0.43
SNORD88B-201ENST00000408454 STK32BQ9NY57 414 aa17.75■□□□□ 0.43
SNORD88B-201ENST00000408454 PPP1R1BQ9UD71 204 aaPredicted RBP17.75■□□□□ 0.43
SNORD88B-201ENST00000408454 HOXC9P31274 260 aa17.74■□□□□ 0.43
SNORD88B-201ENST00000408454 FLT4P35916 1363 aa17.74■□□□□ 0.43
SNORD88B-201ENST00000408454 MAP3K19Q56UN5 1328 aa17.73■□□□□ 0.43
SNORD88B-201ENST00000408454 RGPD5Q99666 1765 aa17.73■□□□□ 0.43
SNORD88B-201ENST00000408454 FYB1O15117 783 aa17.72■□□□□ 0.43
SNORD88B-201ENST00000408454 LTV1Q96GA3 475 aaPredicted RBP17.71■□□□□ 0.43
SNORD88B-201ENST00000408454 NUP188Q5SRE5 1749 aa17.71■□□□□ 0.43
SNORD88B-201ENST00000408454 INSRP06213 1382 aa17.7■□□□□ 0.42
SNORD88B-201ENST00000408454 SLC27A3Q5K4L6 730 aa17.7■□□□□ 0.42
SNORD88B-201ENST00000408454 GGNBP2Q9H3C7 697 aa17.7■□□□□ 0.42
SNORD88B-201ENST00000408454 NHSQ6T4R5 1651 aa17.69■□□□□ 0.42
SNORD88B-201ENST00000408454 KCNQ2O43526 872 aa17.69■□□□□ 0.42
SNORD88B-201ENST00000408454 TATP17735 454 aaPredicted RBP17.69■□□□□ 0.42
SNORD88B-201ENST00000408454 TXNRD1Q16881 649 aa17.69■□□□□ 0.42
SNORD88B-201ENST00000408454 ZCRB1Q8TBF4 217 aaKnown RBP17.69■□□□□ 0.42
SNORD88B-201ENST00000408454 SBF2Q86WG5 1849 aa17.69■□□□□ 0.42
SNORD88B-201ENST00000408454 NSD2O96028 1365 aa17.68■□□□□ 0.42
SNORD88B-201ENST00000408454 KIF20BQ96Q89 1820 aa17.68■□□□□ 0.42
SNORD88B-201ENST00000408454 NSD3Q9BZ95 1437 aa17.68■□□□□ 0.42
SNORD88B-201ENST00000408454 PLEKHG2Q9H7P9 1386 aa17.67■□□□□ 0.42
SNORD88B-201ENST00000408454 DDX54Q8TDD1 881 aaKnown RBP17.67■□□□□ 0.42
SNORD88B-201ENST00000408454 PCDH11XQ9BZA7 1347 aa17.67■□□□□ 0.42
SNORD88B-201ENST00000408454 PCDH11YQ9BZA8 1340 aa17.67■□□□□ 0.42
SNORD88B-201ENST00000408454 POLR3GLQ9BT43 218 aa17.65■□□□□ 0.42
SNORD88B-201ENST00000408454 SLC15A2Q16348 729 aa17.64■□□□□ 0.41
SNORD88B-201ENST00000408454 RRS1Q15050 365 aaKnown RBP17.63■□□□□ 0.41
SNORD88B-201ENST00000408454 SYTL4Q96C24 671 aaPredicted RBP17.63■□□□□ 0.41
SNORD88B-201ENST00000408454 SLC16A10Q8TF71 515 aa17.62■□□□□ 0.41
SNORD88B-201ENST00000408454 ACSBG1Q96GR2 724 aa17.62■□□□□ 0.41
SNORD88B-201ENST00000408454 SPG7Q9UQ90 795 aa17.62■□□□□ 0.41
SNORD88B-201ENST00000408454 MTFR1LQ9H019 292 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms