RNA–Protein interactions for RNA: ENST00000406386.7

TRIOBP-204, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIOBP, Length 10,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-204ENST00000406386 NEK4P51957 841 aa13.33□□□□□ -0.27
TRIOBP-204ENST00000406386 DDX23Q9BUQ8 820 aaKnown RBP13.33□□□□□ -0.28
TRIOBP-204ENST00000406386 MYH10P35580 1976 aa13.33□□□□□ -0.28
TRIOBP-204ENST00000406386 MYO10Q9HD67 2058 aa13.33□□□□□ -0.28
TRIOBP-204ENST00000406386 POTEB2H3BUK9 544 aa13.33□□□□□ -0.28
TRIOBP-204ENST00000406386 ATP2B1P20020 1258 aa13.33□□□□□ -0.28
TRIOBP-204ENST00000406386 ESPNB1AK53 854 aa13.33□□□□□ -0.28
TRIOBP-204ENST00000406386 HOOK3Q86VS8 718 aa13.33□□□□□ -0.28
TRIOBP-204ENST00000406386 CGNQ9P2M7 1197 aaKnown RBP13.33□□□□□ -0.28
TRIOBP-204ENST00000406386 SPECC1LQ69YQ0 1117 aa13.33□□□□□ -0.28
TRIOBP-204ENST00000406386 RUNDC1Q96C34 613 aa13.33□□□□□ -0.28
TRIOBP-204ENST00000406386 CFAP65Q6ZU64 1925 aaKnown RBP13.32□□□□□ -0.28
TRIOBP-204ENST00000406386 RIPK4P57078 832 aa13.32□□□□□ -0.28
TRIOBP-204ENST00000406386 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.32□□□□□ -0.28
TRIOBP-204ENST00000406386 SFPQP23246 707 aaKnown RBP eCLIP13.32□□□□□ -0.28
TRIOBP-204ENST00000406386 GNL3LQ9NVN8 582 aaKnown RBP13.32□□□□□ -0.28
TRIOBP-204ENST00000406386 SMTNL1A8MU46 457 aa13.32□□□□□ -0.28
TRIOBP-204ENST00000406386 ZSCAN12O43309 604 aa13.32□□□□□ -0.28
TRIOBP-204ENST00000406386 SEPT6Q14141 434 aa13.32□□□□□ -0.28
TRIOBP-204ENST00000406386 C6orf163Q5TEZ5 329 aa13.32□□□□□ -0.28
TRIOBP-204ENST00000406386 SPA17Q15506 151 aa13.32□□□□□ -0.28
TRIOBP-204ENST00000406386 KIF18AQ8NI77 898 aa13.32□□□□□ -0.28
TRIOBP-204ENST00000406386 BMP2KQ9NSY1 1161 aaPredicted RBP13.32□□□□□ -0.28
TRIOBP-204ENST00000406386 RRBP1Q9P2E9 1410 aaKnown RBP13.32□□□□□ -0.28
TRIOBP-204ENST00000406386 CYP46A1Q9Y6A2 500 aa13.32□□□□□ -0.28
TRIOBP-204ENST00000406386 DIAPH1O60610 1272 aaKnown RBP13.31□□□□□ -0.28
TRIOBP-204ENST00000406386 SSR1P43307 286 aaKnown RBP13.31□□□□□ -0.28
TRIOBP-204ENST00000406386 CEBPZQ03701 1054 aaKnown RBP13.31□□□□□ -0.28
TRIOBP-204ENST00000406386 NOL7Q9UMY1 257 aaKnown RBP13.31□□□□□ -0.28
TRIOBP-204ENST00000406386 KIF5CO60282 957 aa13.31□□□□□ -0.28
TRIOBP-204ENST00000406386 RNF187Q5TA31 235 aaPredicted RBP13.31□□□□□ -0.28
TRIOBP-204ENST00000406386 PDS5BQ9NTI5 1447 aa13.31□□□□□ -0.28
TRIOBP-204ENST00000406386 WASHC2CQ9Y4E1 1318 aa13.31□□□□□ -0.28
TRIOBP-204ENST00000406386 UPF3BQ9BZI7 483 aaKnown RBP13.31□□□□□ -0.28
TRIOBP-204ENST00000406386 GSTTP1A0A1W2PQM5 241 aa13.3□□□□□ -0.28
TRIOBP-204ENST00000406386 EIF5P55010 431 aaKnown RBP13.3□□□□□ -0.28
TRIOBP-204ENST00000406386 CCDC113Q9H0I3 377 aa13.3□□□□□ -0.28
TRIOBP-204ENST00000406386 BBXQ8WY36 941 aaPredicted RBP13.3□□□□□ -0.28
TRIOBP-204ENST00000406386 NECTIN2Q92692 538 aa13.3□□□□□ -0.28
TRIOBP-204ENST00000406386 PRKRIP1Q9H875 184 aaPredicted RBP13.3□□□□□ -0.28
TRIOBP-204ENST00000406386 GPATCH11Q8N954 259 aa13.3□□□□□ -0.28
TRIOBP-204ENST00000406386 TAOK3Q9H2K8 898 aa13.3□□□□□ -0.28
TRIOBP-204ENST00000406386 IPO4Q8TEX9 1081 aaKnown RBP13.3□□□□□ -0.28
TRIOBP-204ENST00000406386 TSPYL4Q9UJ04 414 aa13.3□□□□□ -0.28
TRIOBP-204ENST00000406386 CCDC88BA6NC98 1476 aa13.3□□□□□ -0.28
TRIOBP-204ENST00000406386 IL27Q8NEV9 243 aa13.29□□□□□ -0.28
TRIOBP-204ENST00000406386 FILIP1Q7Z7B0 1213 aa13.29□□□□□ -0.28
TRIOBP-204ENST00000406386 SETD1BQ9UPS6 1966 aaKnown RBP13.29□□□□□ -0.28
TRIOBP-204ENST00000406386 TRHP20396 242 aaPredicted RBP13.29□□□□□ -0.28
TRIOBP-204ENST00000406386 ZSCAN30Q86W11 494 aa13.29□□□□□ -0.28
TRIOBP-204ENST00000406386 ST20-MTHFSA0A0A6YYL1 179 aa13.29□□□□□ -0.28
TRIOBP-204ENST00000406386 CASQ1P31415 396 aa13.29□□□□□ -0.28
TRIOBP-204ENST00000406386 NACAP1Q9BZK3 213 aa13.29□□□□□ -0.28
TRIOBP-204ENST00000406386 ZHX3Q9H4I2 956 aa13.29□□□□□ -0.28
TRIOBP-204ENST00000406386 GNAI3P08754 354 aa13.29□□□□□ -0.28
TRIOBP-204ENST00000406386 MTMR7Q9Y216 660 aa13.29□□□□□ -0.28
TRIOBP-204ENST00000406386 SYTL4Q96C24 671 aaPredicted RBP13.28□□□□□ -0.28
TRIOBP-204ENST00000406386 CIZ1Q9ULV3 898 aaPredicted RBP13.28□□□□□ -0.28
TRIOBP-204ENST00000406386 APAF1O14727 1248 aa13.28□□□□□ -0.28
TRIOBP-204ENST00000406386 NUP62CLQ9H1M0 184 aa13.28□□□□□ -0.28
TRIOBP-204ENST00000406386 SMARCA4P51532 1647 aa13.28□□□□□ -0.28
TRIOBP-204ENST00000406386 CCDC57Q2TAC2 916 aa13.28□□□□□ -0.28
TRIOBP-204ENST00000406386 RIC3Q7Z5B4 369 aa13.28□□□□□ -0.28
TRIOBP-204ENST00000406386 SPATA32Q96LK8 384 aa13.28□□□□□ -0.28
TRIOBP-204ENST00000406386 DAAM2Q86T65 1068 aa13.28□□□□□ -0.28
TRIOBP-204ENST00000406386 UBE4AQ14139 1066 aa13.28□□□□□ -0.28
TRIOBP-204ENST00000406386 MATR3P43243 847 aaKnown RBP eCLIP13.27□□□□□ -0.28
TRIOBP-204ENST00000406386 CCDC83Q8IWF9 413 aa13.27□□□□□ -0.28
TRIOBP-204ENST00000406386 PTPN14Q15678 1187 aa13.27□□□□□ -0.28
TRIOBP-204ENST00000406386 RAPGEF2Q9Y4G8 1499 aa13.27□□□□□ -0.29
TRIOBP-204ENST00000406386 PANK1Q8TE04 598 aa13.27□□□□□ -0.29
TRIOBP-204ENST00000406386 CTR9Q6PD62 1173 aa13.27□□□□□ -0.29
TRIOBP-204ENST00000406386 UBE2Q2Q8WVN8 375 aa13.27□□□□□ -0.29
TRIOBP-204ENST00000406386 SREK1Q8WXA9 508 aaKnown RBP13.27□□□□□ -0.29
TRIOBP-204ENST00000406386 MAP3K11Q16584 847 aa13.26□□□□□ -0.29
TRIOBP-204ENST00000406386 CCDC69A6NI79 296 aa13.26□□□□□ -0.29
TRIOBP-204ENST00000406386 WASF1Q92558 559 aa13.26□□□□□ -0.29
TRIOBP-204ENST00000406386 ALS2CR12Q96Q35 445 aa13.26□□□□□ -0.29
TRIOBP-204ENST00000406386 GOPCQ9HD26 462 aa13.26□□□□□ -0.29
TRIOBP-204ENST00000406386 FERP16591 822 aa13.26□□□□□ -0.29
TRIOBP-204ENST00000406386 CEP112Q8N8E3 955 aa13.26□□□□□ -0.29
TRIOBP-204ENST00000406386 CEP131Q9UPN4 1083 aa13.26□□□□□ -0.29
TRIOBP-204ENST00000406386 TRAK1Q9UPV9 953 aa13.26□□□□□ -0.29
TRIOBP-204ENST00000406386 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.26□□□□□ -0.29
TRIOBP-204ENST00000406386 V9GYY5 206 aaPredicted RBP13.26□□□□□ -0.29
TRIOBP-204ENST00000406386 CNTLNQ9NXG0 1405 aa13.25□□□□□ -0.29
TRIOBP-204ENST00000406386 SCAPERQ9BY12 1400 aa13.25□□□□□ -0.29
TRIOBP-204ENST00000406386 K7ELQ4 463 aaPredicted RBP13.25□□□□□ -0.29
TRIOBP-204ENST00000406386 WDR66Q8TBY9 1149 aa13.25□□□□□ -0.29
TRIOBP-204ENST00000406386 MNAT1P51948 309 aa13.25□□□□□ -0.29
TRIOBP-204ENST00000406386 CFAP100Q494V2 611 aa13.25□□□□□ -0.29
TRIOBP-204ENST00000406386 FGFR1OPO95684 399 aaKnown RBP13.25□□□□□ -0.29
TRIOBP-204ENST00000406386 SMG6Q86US8 1419 aaKnown RBP13.25□□□□□ -0.29
TRIOBP-204ENST00000406386 BRD4O60885 1362 aaPredicted RBP13.24□□□□□ -0.29
TRIOBP-204ENST00000406386 DDX12PQ92771 950 aa13.24□□□□□ -0.29
TRIOBP-204ENST00000406386 ZWINTO95229 277 aa13.24□□□□□ -0.29
TRIOBP-204ENST00000406386 LARP1BQ659C4 914 aaKnown RBP13.24□□□□□ -0.29
TRIOBP-204ENST00000406386 KIF6Q6ZMV9 814 aa13.24□□□□□ -0.29
TRIOBP-204ENST00000406386 DNAJC2Q99543 621 aaKnown RBP13.24□□□□□ -0.29
TRIOBP-204ENST00000406386 NAA15Q9BXJ9 866 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms