RNA–Protein interactions for RNA: ENST00000405444.3

TBC1D1-204, Transcript of TBC1 domain family member 1, humanhuman

TSL 4

Gene TBC1D1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-204ENST00000405444 WDR17Q8IZU2 1322 aa23.82■■□□□ 1.4
TBC1D1-204ENST00000405444 TOM1L2Q6ZVM7 507 aa23.81■■□□□ 1.4
TBC1D1-204ENST00000405444 TMC1Q8TDI8 760 aa23.81■■□□□ 1.4
TBC1D1-204ENST00000405444 CDCA7Q9BWT1 371 aaPredicted RBP23.81■■□□□ 1.4
TBC1D1-204ENST00000405444 EDC4Q6P2E9 1401 aaKnown RBP23.81■■□□□ 1.4
TBC1D1-204ENST00000405444 EN1Q05925 392 aaPredicted RBP23.79■■□□□ 1.4
TBC1D1-204ENST00000405444 TRIM37O94972 964 aa23.78■■□□□ 1.4
TBC1D1-204ENST00000405444 TESK2Q96S53 571 aa23.78■■□□□ 1.4
TBC1D1-204ENST00000405444 AXIN2Q9Y2T1 843 aa23.78■■□□□ 1.4
TBC1D1-204ENST00000405444 SRCAPQ6ZRS2 3230 aa23.77■■□□□ 1.4
TBC1D1-204ENST00000405444 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.77■■□□□ 1.4
TBC1D1-204ENST00000405444 SLC12A5Q9H2X9 1139 aa23.77■■□□□ 1.4
TBC1D1-204ENST00000405444 OVOS2A0A0G2JMS6 1433 aa23.76■■□□□ 1.39
TBC1D1-204ENST00000405444 OVOS2A0A0J9YW53 1432 aa23.76■■□□□ 1.39
TBC1D1-204ENST00000405444 OVOS2Q6IE36 1432 aa23.76■■□□□ 1.39
TBC1D1-204ENST00000405444 WNK3Q9BYP7 1800 aa23.75■■□□□ 1.39
TBC1D1-204ENST00000405444 ST20-MTHFSA0A0A6YYL1 179 aa23.75■■□□□ 1.39
TBC1D1-204ENST00000405444 CAMKK2Q96RR4 588 aa23.75■■□□□ 1.39
TBC1D1-204ENST00000405444 CARD10Q9BWT7 1032 aa23.75■■□□□ 1.39
TBC1D1-204ENST00000405444 TIMELESSQ9UNS1 1208 aa23.75■■□□□ 1.39
TBC1D1-204ENST00000405444 A0A1W2PP64 1363 aa23.75■■□□□ 1.39
TBC1D1-204ENST00000405444 LRRC37A3O60309 1634 aa23.74■■□□□ 1.39
TBC1D1-204ENST00000405444 SOX12O15370 315 aa23.74■■□□□ 1.39
TBC1D1-204ENST00000405444 APBA3O96018 575 aa23.74■■□□□ 1.39
TBC1D1-204ENST00000405444 DDB1Q16531 1140 aa23.74■■□□□ 1.39
TBC1D1-204ENST00000405444 CLSPNQ9HAW4 1339 aa23.74■■□□□ 1.39
TBC1D1-204ENST00000405444 CSB-PGBD3P0DP91 1061 aa23.73■■□□□ 1.39
TBC1D1-204ENST00000405444 CCDC7Q96M83 1385 aa23.73■■□□□ 1.39
TBC1D1-204ENST00000405444 LRP5O75197 1615 aa23.73■■□□□ 1.39
TBC1D1-204ENST00000405444 RGPD5Q99666 1765 aa23.73■■□□□ 1.39
TBC1D1-204ENST00000405444 NME9Q86XW9 330 aa23.72■■□□□ 1.39
TBC1D1-204ENST00000405444 PEAK1Q9H792 1746 aa23.71■■□□□ 1.39
TBC1D1-204ENST00000405444 EZH2Q15910 746 aaKnown RBP23.71■■□□□ 1.39
TBC1D1-204ENST00000405444 BCL9O00512 1426 aa23.7■■□□□ 1.38
TBC1D1-204ENST00000405444 RREB1Q92766 1687 aa23.69■■□□□ 1.38
TBC1D1-204ENST00000405444 LTN1O94822 1766 aa23.68■■□□□ 1.38
TBC1D1-204ENST00000405444 USP47Q96K76 1375 aa23.68■■□□□ 1.38
TBC1D1-204ENST00000405444 TMF1P82094 1093 aa23.68■■□□□ 1.38
TBC1D1-204ENST00000405444 ERBB3P21860 1342 aa23.67■■□□□ 1.38
TBC1D1-204ENST00000405444 ANKRD36BQ8N2N9 1353 aa23.66■■□□□ 1.38
TBC1D1-204ENST00000405444 RGPD3A6NKT7 1758 aaPredicted RBP23.66■■□□□ 1.38
TBC1D1-204ENST00000405444 RGPD4Q7Z3J3 1758 aa23.66■■□□□ 1.38
TBC1D1-204ENST00000405444 PSDA5PKW4 1024 aaPredicted RBP23.66■■□□□ 1.38
TBC1D1-204ENST00000405444 CDCA8Q53HL2 280 aa23.66■■□□□ 1.38
TBC1D1-204ENST00000405444 SBF2Q86WG5 1849 aa23.64■■□□□ 1.38
TBC1D1-204ENST00000405444 EXOC5O00471 708 aa23.64■■□□□ 1.37
TBC1D1-204ENST00000405444 NBPF14Q5TI25 921 aa23.63■■□□□ 1.37
TBC1D1-204ENST00000405444 NUP188Q5SRE5 1749 aa23.62■■□□□ 1.37
TBC1D1-204ENST00000405444 TNS2Q63HR2 1409 aa23.62■■□□□ 1.37
TBC1D1-204ENST00000405444 PLSCR1O15162 318 aa23.62■■□□□ 1.37
TBC1D1-204ENST00000405444 R3HDM1Q15032 1099 aaKnown RBP23.62■■□□□ 1.37
TBC1D1-204ENST00000405444 COG3Q96JB2 828 aa23.62■■□□□ 1.37
TBC1D1-204ENST00000405444 BCL11BQ9C0K0 894 aaPredicted RBP23.62■■□□□ 1.37
TBC1D1-204ENST00000405444 MARCH10Q8NA82 808 aaPredicted RBP23.61■■□□□ 1.37
TBC1D1-204ENST00000405444 ANKRD24Q8TF21 1146 aa23.6■■□□□ 1.37
TBC1D1-204ENST00000405444 NLRP2Q9NX02 1062 aa23.6■■□□□ 1.37
TBC1D1-204ENST00000405444 FAM208AQ9UK61 1670 aaKnown RBP23.6■■□□□ 1.37
TBC1D1-204ENST00000405444 IP6K1Q92551 441 aa23.59■■□□□ 1.37
TBC1D1-204ENST00000405444 IL2RBP14784 551 aa23.57■■□□□ 1.36
TBC1D1-204ENST00000405444 RTL1A6NKG5 1358 aa23.54■■□□□ 1.36
TBC1D1-204ENST00000405444 PCGF6Q9BYE7 350 aa23.53■■□□□ 1.36
TBC1D1-204ENST00000405444 MAP3K19Q56UN5 1328 aa23.52■■□□□ 1.36
TBC1D1-204ENST00000405444 AMPHP49418 695 aa23.51■■□□□ 1.35
TBC1D1-204ENST00000405444 FYB1O15117 783 aa23.5■■□□□ 1.35
TBC1D1-204ENST00000405444 HOXC9P31274 260 aa23.5■■□□□ 1.35
TBC1D1-204ENST00000405444 NHSQ6T4R5 1651 aa23.5■■□□□ 1.35
TBC1D1-204ENST00000405444 KIF20BQ96Q89 1820 aa23.47■■□□□ 1.35
TBC1D1-204ENST00000405444 KIF24Q5T7B8 1368 aa23.47■■□□□ 1.35
TBC1D1-204ENST00000405444 MYOM1P52179 1685 aa23.46■■□□□ 1.35
TBC1D1-204ENST00000405444 PTF1AQ7RTS3 328 aa23.46■■□□□ 1.35
TBC1D1-204ENST00000405444 SMG6Q86US8 1419 aaKnown RBP23.45■■□□□ 1.34
TBC1D1-204ENST00000405444 GGNBP2Q9H3C7 697 aa23.45■■□□□ 1.34
TBC1D1-204ENST00000405444 LTV1Q96GA3 475 aaPredicted RBP23.44■■□□□ 1.34
TBC1D1-204ENST00000405444 TXNRD1Q16881 649 aa23.43■■□□□ 1.34
TBC1D1-204ENST00000405444 PROM2Q8N271 834 aa23.42■■□□□ 1.34
TBC1D1-204ENST00000405444 SPON1Q9HCB6 807 aa23.42■■□□□ 1.34
TBC1D1-204ENST00000405444 CGNL1Q0VF96 1302 aa23.41■■□□□ 1.34
TBC1D1-204ENST00000405444 KCNQ2O43526 872 aa23.41■■□□□ 1.34
TBC1D1-204ENST00000405444 RRS1Q15050 365 aaKnown RBP23.41■■□□□ 1.34
TBC1D1-204ENST00000405444 NSD3Q9BZ95 1437 aa23.4■■□□□ 1.34
TBC1D1-204ENST00000405444 INSRP06213 1382 aa23.4■■□□□ 1.34
TBC1D1-204ENST00000405444 FLT4P35916 1363 aa23.4■■□□□ 1.34
TBC1D1-204ENST00000405444 FBLN1P23142 703 aa23.39■■□□□ 1.33
TBC1D1-204ENST00000405444 ACSBG1Q96GR2 724 aa23.39■■□□□ 1.33
TBC1D1-204ENST00000405444 CARD14Q9BXL6 1004 aa23.39■■□□□ 1.33
TBC1D1-204ENST00000405444 ANO8Q9HCE9 1232 aaPredicted RBP23.39■■□□□ 1.33
TBC1D1-204ENST00000405444 STK32BQ9NY57 414 aa23.38■■□□□ 1.33
TBC1D1-204ENST00000405444 BTAF1O14981 1849 aa23.38■■□□□ 1.33
TBC1D1-204ENST00000405444 EIF4G2P78344 907 aaKnown RBP eCLIP23.37■■□□□ 1.33
TBC1D1-204ENST00000405444 CCER1Q8TC90 406 aaPredicted RBP23.37■■□□□ 1.33
TBC1D1-204ENST00000405444 CASZ1Q86V15 1759 aa23.37■■□□□ 1.33
TBC1D1-204ENST00000405444 ZCRB1Q8TBF4 217 aaKnown RBP23.36■■□□□ 1.33
TBC1D1-204ENST00000405444 DDX54Q8TDD1 881 aaKnown RBP23.36■■□□□ 1.33
TBC1D1-204ENST00000405444 RGPD2P0DJD1 1756 aa23.36■■□□□ 1.33
TBC1D1-204ENST00000405444 SLC15A2Q16348 729 aa23.35■■□□□ 1.33
TBC1D1-204ENST00000405444 MEGF6O75095 1541 aa23.34■■□□□ 1.33
TBC1D1-204ENST00000405444 NBPF6Q5VWK0 638 aa23.34■■□□□ 1.33
TBC1D1-204ENST00000405444 RAPGEF4Q8WZA2 1011 aa23.34■■□□□ 1.33
TBC1D1-204ENST00000405444 NBPF4Q96M43 638 aa23.34■■□□□ 1.33
TBC1D1-204ENST00000405444 KAT6BQ8WYB5 2073 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms