RNA–Protein interactions for RNA: ENST00000403683.1

HIST2H3A-201, Transcript of histone cluster 2 H3 family member a, humanhuman

APPRIS P1 BASIC

Gene HIST2H3A, Length 1,656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3A-201ENST00000403683 RUNDC1Q96C34 613 aa33.39■■■□□ 2.94
HIST2H3A-201ENST00000403683 PNNQ9H307 717 aaKnown RBP33.39■■■□□ 2.94
HIST2H3A-201ENST00000403683 IP6K1Q92551 441 aa33.38■■■□□ 2.93
HIST2H3A-201ENST00000403683 ARHGEF25Q86VW2 580 aa33.37■■■□□ 2.93
HIST2H3A-201ENST00000403683 LTV1Q96GA3 475 aaPredicted RBP33.37■■■□□ 2.93
HIST2H3A-201ENST00000403683 MED1Q15648 1581 aaPredicted RBP33.36■■■□□ 2.93
HIST2H3A-201ENST00000403683 RTL1A6NKG5 1358 aa33.36■■■□□ 2.93
HIST2H3A-201ENST00000403683 APAF1O14727 1248 aa33.36■■■□□ 2.93
HIST2H3A-201ENST00000403683 HMOX1P09601 288 aa33.36■■■□□ 2.93
HIST2H3A-201ENST00000403683 IQSEC2Q5JU85 1478 aa33.35■■■□□ 2.93
HIST2H3A-201ENST00000403683 NEFMP07197 916 aa33.34■■■□□ 2.93
HIST2H3A-201ENST00000403683 FCHSD2O94868 740 aa33.33■■■□□ 2.93
HIST2H3A-201ENST00000403683 LTN1O94822 1766 aa33.32■■■□□ 2.92
HIST2H3A-201ENST00000403683 MAPK8IP3Q9UPT6 1336 aa33.32■■■□□ 2.92
HIST2H3A-201ENST00000403683 AHDC1Q5TGY3 1603 aaPredicted RBP33.31■■■□□ 2.92
HIST2H3A-201ENST00000403683 PRKAR2BP31323 418 aa33.28■■■□□ 2.92
HIST2H3A-201ENST00000403683 SULT6B1Q6IMI4 303 aa33.28■■■□□ 2.92
HIST2H3A-201ENST00000403683 TCP11L2Q8N4U5 519 aa33.28■■■□□ 2.92
HIST2H3A-201ENST00000403683 NEUROD2Q15784 382 aa33.27■■■□□ 2.92
HIST2H3A-201ENST00000403683 RSPH6AQ9H0K4 717 aa33.27■■■□□ 2.92
HIST2H3A-201ENST00000403683 PHRF1Q9P1Y6 1649 aaKnown RBP33.27■■■□□ 2.92
HIST2H3A-201ENST00000403683 PLEKHF1Q96S99 279 aa33.25■■■□□ 2.91
HIST2H3A-201ENST00000403683 EYA1Q99502 592 aa33.24■■■□□ 2.91
HIST2H3A-201ENST00000403683 RRP7AQ9Y3A4 280 aaKnown RBP33.24■■■□□ 2.91
HIST2H3A-201ENST00000403683 KIAA0232Q92628 1395 aa33.24■■■□□ 2.91
HIST2H3A-201ENST00000403683 CHRNA2Q15822 529 aa33.23■■■□□ 2.91
HIST2H3A-201ENST00000403683 PHLPP1O60346 1717 aa33.23■■■□□ 2.91
HIST2H3A-201ENST00000403683 PRDM11Q9NQV5 511 aa33.23■■■□□ 2.91
HIST2H3A-201ENST00000403683 AEBP1Q8IUX7 1158 aa33.22■■■□□ 2.91
HIST2H3A-201ENST00000403683 NGEFQ8N5V2 710 aa33.21■■■□□ 2.91
HIST2H3A-201ENST00000403683 AXIN2Q9Y2T1 843 aa33.21■■■□□ 2.91
HIST2H3A-201ENST00000403683 ANKRD24Q8TF21 1146 aa33.2■■■□□ 2.91
HIST2H3A-201ENST00000403683 CPDO75976 1380 aa33.19■■■□□ 2.9
HIST2H3A-201ENST00000403683 IGSF1Q8N6C5 1336 aa33.17■■■□□ 2.9
HIST2H3A-201ENST00000403683 CRYBG1Q9Y4K1 1723 aa33.17■■■□□ 2.9
HIST2H3A-201ENST00000403683 TMPOP42166 694 aaKnown RBP33.15■■■□□ 2.9
HIST2H3A-201ENST00000403683 PHACTR3Q96KR7 559 aa33.15■■■□□ 2.9
HIST2H3A-201ENST00000403683 CSB-PGBD3P0DP91 1061 aa33.14■■■□□ 2.9
HIST2H3A-201ENST00000403683 PDE3BQ13370 1112 aa33.14■■■□□ 2.9
HIST2H3A-201ENST00000403683 USHBP1Q8N6Y0 703 aa33.14■■■□□ 2.9
HIST2H3A-201ENST00000403683 NBPF6Q5VWK0 638 aa33.13■■■□□ 2.89
HIST2H3A-201ENST00000403683 NBPF4Q96M43 638 aa33.13■■■□□ 2.89
HIST2H3A-201ENST00000403683 COL16A1Q07092 1604 aaPredicted RBP33.12■■■□□ 2.89
HIST2H3A-201ENST00000403683 RIPK4P57078 832 aa33.12■■■□□ 2.89
HIST2H3A-201ENST00000403683 RGPD1P0DJD0 1748 aa33.1■■■□□ 2.89
HIST2H3A-201ENST00000403683 ERBB3P21860 1342 aa33.1■■■□□ 2.89
HIST2H3A-201ENST00000403683 NFE2L2Q16236 605 aa33.09■■■□□ 2.89
HIST2H3A-201ENST00000403683 WWC1Q8IX03 1113 aa33.09■■■□□ 2.89
HIST2H3A-201ENST00000403683 NLRP2Q9NX02 1062 aa33.09■■■□□ 2.89
HIST2H3A-201ENST00000403683 GOLGA2Q08379 1002 aa33.08■■■□□ 2.89
HIST2H3A-201ENST00000403683 ABCA3Q99758 1704 aa33.07■■■□□ 2.88
HIST2H3A-201ENST00000403683 KDRP35968 1356 aa33.07■■■□□ 2.88
HIST2H3A-201ENST00000403683 NUTM2BA6NNL0 878 aaPredicted RBP33.07■■■□□ 2.88
HIST2H3A-201ENST00000403683 NUTM2EB1AL46 878 aaPredicted RBP33.07■■■□□ 2.88
HIST2H3A-201ENST00000403683 NUTM2AQ8IVF1 878 aaPredicted RBP33.07■■■□□ 2.88
HIST2H3A-201ENST00000403683 CDCA7LQ96GN5 454 aa33.07■■■□□ 2.88
HIST2H3A-201ENST00000403683 FAM83GA6ND36 823 aa33.06■■■□□ 2.88
HIST2H3A-201ENST00000403683 CCDC27Q2M243 656 aa33.06■■■□□ 2.88
HIST2H3A-201ENST00000403683 NCBP3Q53F19 620 aaKnown RBP33.05■■■□□ 2.88
HIST2H3A-201ENST00000403683 ZNF521Q96K83 1311 aa33.05■■■□□ 2.88
HIST2H3A-201ENST00000403683 RGPD5Q99666 1765 aa33.05■■■□□ 2.88
HIST2H3A-201ENST00000403683 EVA1CP58658 441 aa33.04■■■□□ 2.88
HIST2H3A-201ENST00000403683 ABCC6O95255 1503 aa33.04■■■□□ 2.88
HIST2H3A-201ENST00000403683 COL22A1Q8NFW1 1626 aaPredicted RBP33.03■■■□□ 2.88
HIST2H3A-201ENST00000403683 COL18A1P39060 1754 aa33.03■■■□□ 2.88
HIST2H3A-201ENST00000403683 ADAMTS2O95450 1211 aa33.02■■■□□ 2.88
HIST2H3A-201ENST00000403683 STRN4Q9NRL3 753 aa33.01■■■□□ 2.87
HIST2H3A-201ENST00000403683 TRIM35Q9UPQ4 493 aa33■■■□□ 2.87
HIST2H3A-201ENST00000403683 WDR63Q8IWG1 891 aa32.99■■■□□ 2.87
HIST2H3A-201ENST00000403683 JCADQ9P266 1359 aa32.98■■■□□ 2.87
HIST2H3A-201ENST00000403683 LMOD3Q0VAK6 560 aa32.98■■■□□ 2.87
HIST2H3A-201ENST00000403683 PHF23Q9BUL5 403 aaPredicted RBP32.98■■■□□ 2.87
HIST2H3A-201ENST00000403683 TOM1L2Q6ZVM7 507 aa32.97■■■□□ 2.87
HIST2H3A-201ENST00000403683 GAS2L2Q8NHY3 880 aa32.97■■■□□ 2.87
HIST2H3A-201ENST00000403683 CAMTA1Q9Y6Y1 1673 aa32.97■■■□□ 2.87
HIST2H3A-201ENST00000403683 MTHFSDQ2M296 383 aaKnown RBP32.97■■■□□ 2.87
HIST2H3A-201ENST00000403683 BTG4Q9NY30 223 aa32.97■■■□□ 2.87
HIST2H3A-201ENST00000403683 RGPD2P0DJD1 1756 aa32.97■■■□□ 2.87
HIST2H3A-201ENST00000403683 E9PSI1 815 aa32.96■■■□□ 2.87
HIST2H3A-201ENST00000403683 WDR17Q8IZU2 1322 aa32.95■■■□□ 2.87
HIST2H3A-201ENST00000403683 HSPA1LP34931 641 aa32.95■■■□□ 2.87
HIST2H3A-201ENST00000403683 SLFN5Q08AF3 891 aa32.94■■■□□ 2.86
HIST2H3A-201ENST00000403683 RAPGEF4Q8WZA2 1011 aa32.94■■■□□ 2.86
HIST2H3A-201ENST00000403683 COL5A2P05997 1499 aaPredicted RBP32.92■■■□□ 2.86
HIST2H3A-201ENST00000403683 PLEKHO1Q53GL0 409 aaPredicted RBP32.91■■■□□ 2.86
HIST2H3A-201ENST00000403683 SPINK5Q9NQ38 1064 aaPredicted RBP32.91■■■□□ 2.86
HIST2H3A-201ENST00000403683 LMO7Q8WWI1 1683 aa32.91■■■□□ 2.86
HIST2H3A-201ENST00000403683 RTF1Q92541 710 aaKnown RBP32.91■■■□□ 2.86
HIST2H3A-201ENST00000403683 CALD1Q05682 793 aaKnown RBP32.89■■■□□ 2.86
HIST2H3A-201ENST00000403683 LARP1Q6PKG0 1096 aaKnown RBP32.89■■■□□ 2.86
HIST2H3A-201ENST00000403683 TATP17735 454 aaPredicted RBP32.88■■■□□ 2.85
HIST2H3A-201ENST00000403683 AMOTQ4VCS5 1084 aa32.88■■■□□ 2.85
HIST2H3A-201ENST00000403683 NCAPD2Q15021 1401 aa32.88■■■□□ 2.85
HIST2H3A-201ENST00000403683 COL14A1Q05707 1796 aaKnown RBP32.88■■■□□ 2.85
HIST2H3A-201ENST00000403683 DUSP27Q5VZP5 1158 aa32.88■■■□□ 2.85
HIST2H3A-201ENST00000403683 THUMPD2Q9BTF0 503 aaKnown RBP32.88■■■□□ 2.85
HIST2H3A-201ENST00000403683 FAM208AQ9UK61 1670 aaKnown RBP32.87■■■□□ 2.85
HIST2H3A-201ENST00000403683 DCTN1Q14203 1278 aa32.87■■■□□ 2.85
HIST2H3A-201ENST00000403683 MYH16Q9H6N6 1097 aa32.87■■■□□ 2.85
HIST2H3A-201ENST00000403683 LAS1LQ9Y4W2 734 aaKnown RBP32.86■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms