RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 ATRNO75882 1429 aa23.47■■□□□ 1.35
PTCHD3P3-201ENST00000403073 AMPHP49418 695 aa23.46■■□□□ 1.35
PTCHD3P3-201ENST00000403073 PLCH1Q4KWH8 1693 aa23.46■■□□□ 1.35
PTCHD3P3-201ENST00000403073 RXRBP28702 533 aa23.45■■□□□ 1.34
PTCHD3P3-201ENST00000403073 IP6K1Q92551 441 aa23.45■■□□□ 1.34
PTCHD3P3-201ENST00000403073 GJD4Q96KN9 370 aaPredicted RBP23.45■■□□□ 1.34
PTCHD3P3-201ENST00000403073 LARP1Q6PKG0 1096 aaKnown RBP23.44■■□□□ 1.34
PTCHD3P3-201ENST00000403073 HOXC9P31274 260 aa23.43■■□□□ 1.34
PTCHD3P3-201ENST00000403073 RBM6P78332 1123 aaKnown RBP23.43■■□□□ 1.34
PTCHD3P3-201ENST00000403073 EMILIN1Q9Y6C2 1016 aa23.43■■□□□ 1.34
PTCHD3P3-201ENST00000403073 LMO7Q8WWI1 1683 aa23.43■■□□□ 1.34
PTCHD3P3-201ENST00000403073 PPM1GO15355 546 aaPredicted RBP23.42■■□□□ 1.34
PTCHD3P3-201ENST00000403073 POLKQ9UBT6 870 aa23.42■■□□□ 1.34
PTCHD3P3-201ENST00000403073 COL5A2P05997 1499 aaPredicted RBP23.42■■□□□ 1.34
PTCHD3P3-201ENST00000403073 NPC1L1Q9UHC9 1359 aa23.41■■□□□ 1.34
PTCHD3P3-201ENST00000403073 ILDR2Q71H61 639 aa23.41■■□□□ 1.34
PTCHD3P3-201ENST00000403073 COL18A1P39060 1754 aa23.41■■□□□ 1.34
PTCHD3P3-201ENST00000403073 NWD2Q9ULI1 1742 aa23.41■■□□□ 1.34
PTCHD3P3-201ENST00000403073 CSB-PGBD3P0DP91 1061 aa23.4■■□□□ 1.34
PTCHD3P3-201ENST00000403073 LTV1Q96GA3 475 aaPredicted RBP23.4■■□□□ 1.34
PTCHD3P3-201ENST00000403073 USP35Q9P2H5 1018 aa23.4■■□□□ 1.34
PTCHD3P3-201ENST00000403073 SPATA31A5Q5VU36 1347 aa23.39■■□□□ 1.34
PTCHD3P3-201ENST00000403073 SPATA31A7Q8IWB4 1347 aa23.39■■□□□ 1.34
PTCHD3P3-201ENST00000403073 HSP90AB2PQ58FF8 381 aa23.39■■□□□ 1.33
PTCHD3P3-201ENST00000403073 ANKRD24Q8TF21 1146 aa23.39■■□□□ 1.33
PTCHD3P3-201ENST00000403073 NRAPQ86VF7 1730 aa23.39■■□□□ 1.33
PTCHD3P3-201ENST00000403073 TOM1L2Q6ZVM7 507 aa23.38■■□□□ 1.33
PTCHD3P3-201ENST00000403073 SPATA31A1Q5TZJ5 1347 aa23.37■■□□□ 1.33
PTCHD3P3-201ENST00000403073 WDR17Q8IZU2 1322 aa23.37■■□□□ 1.33
PTCHD3P3-201ENST00000403073 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.36■■□□□ 1.33
PTCHD3P3-201ENST00000403073 RTL1A6NKG5 1358 aa23.36■■□□□ 1.33
PTCHD3P3-201ENST00000403073 ERBB3P21860 1342 aa23.35■■□□□ 1.33
PTCHD3P3-201ENST00000403073 BLMP54132 1417 aaPredicted RBP23.35■■□□□ 1.33
PTCHD3P3-201ENST00000403073 ABCC6O95255 1503 aa23.35■■□□□ 1.33
PTCHD3P3-201ENST00000403073 ANKRD26Q9UPS8 1709 aa23.35■■□□□ 1.33
PTCHD3P3-201ENST00000403073 LTN1O94822 1766 aa23.35■■□□□ 1.33
PTCHD3P3-201ENST00000403073 FAM98CQ17RN3 349 aaKnown RBP23.34■■□□□ 1.33
PTCHD3P3-201ENST00000403073 NLRP2Q9NX02 1062 aa23.34■■□□□ 1.33
PTCHD3P3-201ENST00000403073 FLT4P35916 1363 aa23.34■■□□□ 1.33
PTCHD3P3-201ENST00000403073 CRB1P82279 1406 aa23.33■■□□□ 1.33
PTCHD3P3-201ENST00000403073 GLI3P10071 1580 aa23.33■■□□□ 1.33
PTCHD3P3-201ENST00000403073 KIF24Q5T7B8 1368 aa23.33■■□□□ 1.33
PTCHD3P3-201ENST00000403073 INSRP06213 1382 aa23.32■■□□□ 1.32
PTCHD3P3-201ENST00000403073 TCP11L2Q8N4U5 519 aa23.32■■□□□ 1.32
PTCHD3P3-201ENST00000403073 PEAK1Q9H792 1746 aa23.31■■□□□ 1.32
PTCHD3P3-201ENST00000403073 ONECUT3O60422 494 aaPredicted RBP23.31■■□□□ 1.32
PTCHD3P3-201ENST00000403073 MTHFSP49914 203 aa23.31■■□□□ 1.32
PTCHD3P3-201ENST00000403073 CARD10Q9BWT7 1032 aa23.31■■□□□ 1.32
PTCHD3P3-201ENST00000403073 A0A0G2JS52 829 aa23.29■■□□□ 1.32
PTCHD3P3-201ENST00000403073 MYT1Q01538 1121 aa23.29■■□□□ 1.32
PTCHD3P3-201ENST00000403073 SEPT12Q8IYM1 358 aa23.29■■□□□ 1.32
PTCHD3P3-201ENST00000403073 RGPD5Q99666 1765 aa23.29■■□□□ 1.32
PTCHD3P3-201ENST00000403073 RGS12O14924 1447 aa23.28■■□□□ 1.32
PTCHD3P3-201ENST00000403073 BARGINQ6ZT62 677 aa23.28■■□□□ 1.32
PTCHD3P3-201ENST00000403073 THRAP3Q9Y2W1 955 aaKnown RBP23.28■■□□□ 1.32
PTCHD3P3-201ENST00000403073 SMG6Q86US8 1419 aaKnown RBP23.27■■□□□ 1.32
PTCHD3P3-201ENST00000403073 NBPF6Q5VWK0 638 aa23.27■■□□□ 1.32
PTCHD3P3-201ENST00000403073 NBPF4Q96M43 638 aa23.27■■□□□ 1.32
PTCHD3P3-201ENST00000403073 CDK12Q9NYV4 1490 aaPredicted RBP23.26■■□□□ 1.31
PTCHD3P3-201ENST00000403073 PPP2R1AP30153 589 aa23.26■■□□□ 1.31
PTCHD3P3-201ENST00000403073 EIF4A2Q14240 407 aaKnown RBP23.25■■□□□ 1.31
PTCHD3P3-201ENST00000403073 USHBP1Q8N6Y0 703 aa23.24■■□□□ 1.31
PTCHD3P3-201ENST00000403073 PARD3Q8TEW0 1356 aa23.24■■□□□ 1.31
PTCHD3P3-201ENST00000403073 MAP2P11137 1827 aaKnown RBP23.23■■□□□ 1.31
PTCHD3P3-201ENST00000403073 RALBP1Q15311 655 aa23.21■■□□□ 1.31
PTCHD3P3-201ENST00000403073 EYA1Q99502 592 aa23.21■■□□□ 1.31
PTCHD3P3-201ENST00000403073 IL13P35225 146 aa23.19■■□□□ 1.3
PTCHD3P3-201ENST00000403073 IL2RBP14784 551 aa23.18■■□□□ 1.3
PTCHD3P3-201ENST00000403073 CDCA7Q9BWT1 371 aaPredicted RBP23.18■■□□□ 1.3
PTCHD3P3-201ENST00000403073 KRT27Q7Z3Y8 459 aa23.17■■□□□ 1.3
PTCHD3P3-201ENST00000403073 DISP2A7MBM2 1401 aa23.16■■□□□ 1.3
PTCHD3P3-201ENST00000403073 DIAPH1O60610 1272 aaKnown RBP23.16■■□□□ 1.3
PTCHD3P3-201ENST00000403073 DDB1Q16531 1140 aa23.16■■□□□ 1.3
PTCHD3P3-201ENST00000403073 PRKRIP1Q9H875 184 aaPredicted RBP23.16■■□□□ 1.3
PTCHD3P3-201ENST00000403073 FAM182BQ5T319 152 aa23.15■■□□□ 1.3
PTCHD3P3-201ENST00000403073 CFAP53Q96M91 514 aa23.15■■□□□ 1.3
PTCHD3P3-201ENST00000403073 THSD7AQ9UPZ6 1657 aa23.15■■□□□ 1.3
PTCHD3P3-201ENST00000403073 EXOC5O00471 708 aa23.14■■□□□ 1.29
PTCHD3P3-201ENST00000403073 PDE3BQ13370 1112 aa23.14■■□□□ 1.29
PTCHD3P3-201ENST00000403073 RAPGEF4Q8WZA2 1011 aa23.13■■□□□ 1.29
PTCHD3P3-201ENST00000403073 IGSF1Q8N6C5 1336 aa23.12■■□□□ 1.29
PTCHD3P3-201ENST00000403073 FAM208AQ9UK61 1670 aaKnown RBP23.12■■□□□ 1.29
PTCHD3P3-201ENST00000403073 MYBBP1AQ9BQG0 1328 aaKnown RBP23.11■■□□□ 1.29
PTCHD3P3-201ENST00000403073 TATP17735 454 aaPredicted RBP23.11■■□□□ 1.29
PTCHD3P3-201ENST00000403073 AEBP1Q8IUX7 1158 aa23.11■■□□□ 1.29
PTCHD3P3-201ENST00000403073 RGPD2P0DJD1 1756 aa23.11■■□□□ 1.29
PTCHD3P3-201ENST00000403073 COL3A1P02461 1466 aaPredicted RBP23.11■■□□□ 1.29
PTCHD3P3-201ENST00000403073 SULT6B1Q6IMI4 303 aa23.1■■□□□ 1.29
PTCHD3P3-201ENST00000403073 NCAPD2Q15021 1401 aa23.09■■□□□ 1.29
PTCHD3P3-201ENST00000403073 MEGF6O75095 1541 aa23.09■■□□□ 1.29
PTCHD3P3-201ENST00000403073 U2SURPO15042 1029 aaKnown RBP23.09■■□□□ 1.29
PTCHD3P3-201ENST00000403073 MARCH10Q8NA82 808 aaPredicted RBP23.08■■□□□ 1.29
PTCHD3P3-201ENST00000403073 HMOX1P09601 288 aa23.07■■□□□ 1.28
PTCHD3P3-201ENST00000403073 ZCRB1Q8TBF4 217 aaKnown RBP23.07■■□□□ 1.28
PTCHD3P3-201ENST00000403073 DDX54Q8TDD1 881 aaKnown RBP23.07■■□□□ 1.28
PTCHD3P3-201ENST00000403073 ANP32CO43423 234 aa23.06■■□□□ 1.28
PTCHD3P3-201ENST00000403073 NUDCQ9Y266 331 aa23.05■■□□□ 1.28
PTCHD3P3-201ENST00000403073 OVOS2A0A0G2JMS6 1433 aa23.05■■□□□ 1.28
PTCHD3P3-201ENST00000403073 BRWD3Q6RI45 1802 aa23.05■■□□□ 1.28
PTCHD3P3-201ENST00000403073 PARP4Q9UKK3 1724 aaKnown RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms