RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 EVI5LQ96CN4 794 aa5.17□□□□□ -1.58
CLHC1-201ENST00000401408 CDCA7Q9BWT1 371 aaPredicted RBP5.17□□□□□ -1.58
CLHC1-201ENST00000401408 TSPYL2Q9H2G4 693 aaPredicted RBP5.17□□□□□ -1.58
CLHC1-201ENST00000401408 PREX2Q70Z35 1606 aa5.17□□□□□ -1.58
CLHC1-201ENST00000401408 FAM193AP78312 1265 aa5.17□□□□□ -1.58
CLHC1-201ENST00000401408 CCDC181Q5TID7 509 aa5.17□□□□□ -1.58
CLHC1-201ENST00000401408 FTSJ3Q8IY81 847 aaKnown RBP5.17□□□□□ -1.58
CLHC1-201ENST00000401408 SAMD9LQ8IVG5 1584 aa5.17□□□□□ -1.58
CLHC1-201ENST00000401408 CDK12Q9NYV4 1490 aaPredicted RBP5.17□□□□□ -1.58
CLHC1-201ENST00000401408 PPFIA4O75335 1185 aa5.16□□□□□ -1.58
CLHC1-201ENST00000401408 CSB-PGBD3P0DP91 1061 aa5.16□□□□□ -1.58
CLHC1-201ENST00000401408 FOXD4Q12950 439 aaPredicted RBP5.16□□□□□ -1.58
CLHC1-201ENST00000401408 RBM46Q8TBY0 533 aaKnown RBP5.16□□□□□ -1.58
CLHC1-201ENST00000401408 INO80Q9ULG1 1556 aaPredicted RBP5.16□□□□□ -1.58
CLHC1-201ENST00000401408 VGFO15240 615 aaPredicted RBP5.16□□□□□ -1.58
CLHC1-201ENST00000401408 MAP3K13O43283 966 aa5.16□□□□□ -1.58
CLHC1-201ENST00000401408 CREB3O43889 395 aa5.16□□□□□ -1.58
CLHC1-201ENST00000401408 ZNF16P17020 682 aaPredicted RBP5.16□□□□□ -1.58
CLHC1-201ENST00000401408 DPH6Q7L8W6 267 aa5.16□□□□□ -1.58
CLHC1-201ENST00000401408 SMC5Q8IY18 1101 aa5.16□□□□□ -1.58
CLHC1-201ENST00000401408 VTI1AQ96AJ9 217 aa5.16□□□□□ -1.58
CLHC1-201ENST00000401408 METTL14Q9HCE5 456 aaKnown RBP5.16□□□□□ -1.58
CLHC1-201ENST00000401408 MAGEC2Q9UBF1 373 aaPredicted RBP5.16□□□□□ -1.58
CLHC1-201ENST00000401408 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.16□□□□□ -1.58
CLHC1-201ENST00000401408 ARHGAP5Q13017 1502 aa5.16□□□□□ -1.58
CLHC1-201ENST00000401408 LRRIQ1Q96JM4 1722 aa5.15□□□□□ -1.58
CLHC1-201ENST00000401408 NPHP4O75161 1426 aaPredicted RBP5.15□□□□□ -1.58
CLHC1-201ENST00000401408 IRX5P78411 483 aaPredicted RBP5.15□□□□□ -1.58
CLHC1-201ENST00000401408 NAALADL2Q58DX5 795 aa5.15□□□□□ -1.58
CLHC1-201ENST00000401408 RTL5Q5HYW3 569 aaPredicted RBP5.15□□□□□ -1.58
CLHC1-201ENST00000401408 MTA3Q9BTC8 594 aa5.15□□□□□ -1.58
CLHC1-201ENST00000401408 HCSTQ9UBK5 93 aa5.15□□□□□ -1.58
CLHC1-201ENST00000401408 COG6Q9Y2V7 657 aa5.15□□□□□ -1.58
CLHC1-201ENST00000401408 ROBO1Q9Y6N7 1651 aa5.15□□□□□ -1.58
CLHC1-201ENST00000401408 CDC42BPAQ5VT25 1732 aa5.15□□□□□ -1.59
CLHC1-201ENST00000401408 SH3BP5O60239 455 aa5.15□□□□□ -1.59
CLHC1-201ENST00000401408 KRBA2Q6ZNG9 492 aa5.15□□□□□ -1.59
CLHC1-201ENST00000401408 CCER1Q8TC90 406 aaPredicted RBP5.15□□□□□ -1.59
CLHC1-201ENST00000401408 GPATCH3Q96I76 525 aa5.15□□□□□ -1.59
CLHC1-201ENST00000401408 ESF1Q9H501 851 aaKnown RBP5.15□□□□□ -1.59
CLHC1-201ENST00000401408 PHF14O94880 888 aa5.14□□□□□ -1.59
CLHC1-201ENST00000401408 ZFYVE27Q5T4F4 411 aa5.14□□□□□ -1.59
CLHC1-201ENST00000401408 PBXIP1Q96AQ6 731 aa5.14□□□□□ -1.59
CLHC1-201ENST00000401408 CALR3Q96L12 384 aaKnown RBP5.14□□□□□ -1.59
CLHC1-201ENST00000401408 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.14□□□□□ -1.59
CLHC1-201ENST00000401408 TROQ12816 1431 aaPredicted RBP5.14□□□□□ -1.59
CLHC1-201ENST00000401408 CEP350Q5VT06 3117 aa5.14□□□□□ -1.59
CLHC1-201ENST00000401408 FAM135AQ9P2D6 1515 aa5.14□□□□□ -1.59
CLHC1-201ENST00000401408 LRP6O75581 1613 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 PARNO95453 639 aaKnown RBP5.13□□□□□ -1.59
CLHC1-201ENST00000401408 SBNO2Q9Y2G9 1366 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 PZPP20742 1482 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 COL16A1Q07092 1604 aaPredicted RBP5.13□□□□□ -1.59
CLHC1-201ENST00000401408 CCDC194A0A1B0GVG4 234 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 CCER2I3L3R5 266 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 TBC1D12O60347 775 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 PAX3P23760 479 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 ARID4AP29374 1257 aaPredicted RBP5.13□□□□□ -1.59
CLHC1-201ENST00000401408 RINLQ6ZS11 566 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 PARP9Q8IXQ6 854 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.13□□□□□ -1.595e-7■□□□□ 10.4
CLHC1-201ENST00000401408 PNMA2Q9UL42 364 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 RPS6KL1Q9Y6S9 549 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 NLRP1Q9C000 1473 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 ATP7AQ04656 1500 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 MAP3K1Q13233 1512 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 KDM5DQ9BY66 1539 aa5.13□□□□□ -1.59
CLHC1-201ENST00000401408 VARS2Q5ST30 1063 aaKnown RBP5.12□□□□□ -1.59
CLHC1-201ENST00000401408 ANKLE2Q86XL3 938 aa5.12□□□□□ -1.59
CLHC1-201ENST00000401408 PMM1Q92871 262 aa5.12□□□□□ -1.59
CLHC1-201ENST00000401408 SPOCK3Q9BQ16 436 aa5.12□□□□□ -1.59
CLHC1-201ENST00000401408 BCL2L13Q9BXK5 485 aa5.12□□□□□ -1.59
CLHC1-201ENST00000401408 SETBP1Q9Y6X0 1596 aa5.12□□□□□ -1.59
CLHC1-201ENST00000401408 ADGBQ8N7X0 1667 aa5.12□□□□□ -1.59
CLHC1-201ENST00000401408 hCG_2014768A0A024R1R8 64 aa5.12□□□□□ -1.59
CLHC1-201ENST00000401408 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.12□□□□□ -1.59
CLHC1-201ENST00000401408 IGBP1P78318 339 aa5.12□□□□□ -1.59
CLHC1-201ENST00000401408 MYBPC2Q14324 1141 aa5.12□□□□□ -1.59
CLHC1-201ENST00000401408 WDR78Q5VTH9 848 aa5.12□□□□□ -1.59
CLHC1-201ENST00000401408 TSHZ1Q6ZSZ6 1077 aa5.12□□□□□ -1.59
CLHC1-201ENST00000401408 TMA7Q9Y2S6 64 aaKnown RBP5.12□□□□□ -1.59
CLHC1-201ENST00000401408 A2MP01023 1474 aa5.12□□□□□ -1.59
CLHC1-201ENST00000401408 UGGT1Q9NYU2 1555 aa5.12□□□□□ -1.59
CLHC1-201ENST00000401408 SHPRHQ149N8 1683 aa5.11□□□□□ -1.59
CLHC1-201ENST00000401408 TNRQ92752 1358 aa5.11□□□□□ -1.59
CLHC1-201ENST00000401408 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.11□□□□□ -1.59
CLHC1-201ENST00000401408 EIF3JO75822 258 aaKnown RBP5.11□□□□□ -1.59
CLHC1-201ENST00000401408 HOXB1P14653 301 aaPredicted RBP5.11□□□□□ -1.59
CLHC1-201ENST00000401408 ANKRD13DQ6ZTN6 518 aa5.11□□□□□ -1.59
CLHC1-201ENST00000401408 ZBTB47Q9UFB7 747 aaPredicted RBP5.11□□□□□ -1.59
CLHC1-201ENST00000401408 SALL2Q9Y467 1007 aaPredicted RBP5.11□□□□□ -1.59
CLHC1-201ENST00000401408 PHLPP1O60346 1717 aa5.11□□□□□ -1.59
CLHC1-201ENST00000401408 APLP1P51693 650 aa5.11□□□□□ -1.59
CLHC1-201ENST00000401408 GSE1Q14687 1217 aa5.11□□□□□ -1.59
CLHC1-201ENST00000401408 LARGE2Q8N3Y3 721 aa5.11□□□□□ -1.59
CLHC1-201ENST00000401408 GIPC2Q8TF65 315 aa5.11□□□□□ -1.59
CLHC1-201ENST00000401408 CHMP4BQ9H444 224 aaKnown RBP5.11□□□□□ -1.59
CLHC1-201ENST00000401408 LRP5O75197 1615 aa5.1□□□□□ -1.59
CLHC1-201ENST00000401408 ARHGAP23Q9P227 1491 aa5.1□□□□□ -1.59
CLHC1-201ENST00000401408 MIA2Q96PC5 1412 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms