RNA–Protein interactions for RNA: ENST00000399892.6

SEH1L-202, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best) BASIC

Gene SEH1L, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-202ENST00000399892 LMO7Q8WWI1 1683 aa24.05■■□□□ 1.44
SEH1L-202ENST00000399892 COL18A1P39060 1754 aa24.04■■□□□ 1.44
SEH1L-202ENST00000399892 BCL9LQ86UU0 1499 aa24.04■■□□□ 1.44
SEH1L-202ENST00000399892 CCDC9Q9Y3X0 531 aaKnown RBP24.04■■□□□ 1.44
SEH1L-202ENST00000399892 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.04■■□□□ 1.44
SEH1L-202ENST00000399892 CAMTA1Q9Y6Y1 1673 aa24.04■■□□□ 1.44
SEH1L-202ENST00000399892 TRPC5Q9UL62 973 aaPredicted RBP24.03■■□□□ 1.44
SEH1L-202ENST00000399892 ABCC6O95255 1503 aa24.03■■□□□ 1.44
SEH1L-202ENST00000399892 QTRT2Q9H974 415 aaKnown RBP24.03■■□□□ 1.44
SEH1L-202ENST00000399892 AXIN2Q9Y2T1 843 aa24.03■■□□□ 1.44
SEH1L-202ENST00000399892 IP6K1Q92551 441 aa24.02■■□□□ 1.44
SEH1L-202ENST00000399892 EMILIN1Q9Y6C2 1016 aa24.02■■□□□ 1.44
SEH1L-202ENST00000399892 NRAPQ86VF7 1730 aa24.02■■□□□ 1.44
SEH1L-202ENST00000399892 RTL1A6NKG5 1358 aa24.01■■□□□ 1.43
SEH1L-202ENST00000399892 CSB-PGBD3P0DP91 1061 aa24.01■■□□□ 1.43
SEH1L-202ENST00000399892 RGS17Q9UGC6 210 aaPredicted RBP24.01■■□□□ 1.43
SEH1L-202ENST00000399892 HOXC9P31274 260 aa24■■□□□ 1.43
SEH1L-202ENST00000399892 POLKQ9UBT6 870 aa24■■□□□ 1.43
SEH1L-202ENST00000399892 FLT4P35916 1363 aa24■■□□□ 1.43
SEH1L-202ENST00000399892 BLMP54132 1417 aaPredicted RBP24■■□□□ 1.43
SEH1L-202ENST00000399892 KIF24Q5T7B8 1368 aa24■■□□□ 1.43
SEH1L-202ENST00000399892 COL5A2P05997 1499 aaPredicted RBP23.99■■□□□ 1.43
SEH1L-202ENST00000399892 LTV1Q96GA3 475 aaPredicted RBP23.98■■□□□ 1.43
SEH1L-202ENST00000399892 PEAK1Q9H792 1746 aa23.97■■□□□ 1.43
SEH1L-202ENST00000399892 VPS72Q15906 364 aa23.97■■□□□ 1.43
SEH1L-202ENST00000399892 ANKRD24Q8TF21 1146 aa23.96■■□□□ 1.43
SEH1L-202ENST00000399892 ATRNO75882 1429 aa23.96■■□□□ 1.43
SEH1L-202ENST00000399892 LARP1Q6PKG0 1096 aaKnown RBP23.96■■□□□ 1.43
SEH1L-202ENST00000399892 POTEAQ6S8J7 498 aa23.96■■□□□ 1.43
SEH1L-202ENST00000399892 TOM1L2Q6ZVM7 507 aa23.96■■□□□ 1.43
SEH1L-202ENST00000399892 SMG6Q86US8 1419 aaKnown RBP23.95■■□□□ 1.43
SEH1L-202ENST00000399892 HSP90AB2PQ58FF8 381 aa23.95■■□□□ 1.42
SEH1L-202ENST00000399892 USP35Q9P2H5 1018 aa23.95■■□□□ 1.42
SEH1L-202ENST00000399892 ERBB3P21860 1342 aa23.95■■□□□ 1.42
SEH1L-202ENST00000399892 WDR17Q8IZU2 1322 aa23.95■■□□□ 1.42
SEH1L-202ENST00000399892 GJD4Q96KN9 370 aaPredicted RBP23.94■■□□□ 1.42
SEH1L-202ENST00000399892 INSRP06213 1382 aa23.94■■□□□ 1.42
SEH1L-202ENST00000399892 RXRBP28702 533 aa23.94■■□□□ 1.42
SEH1L-202ENST00000399892 MTHFSP49914 203 aa23.94■■□□□ 1.42
SEH1L-202ENST00000399892 RBM6P78332 1123 aaKnown RBP23.93■■□□□ 1.42
SEH1L-202ENST00000399892 RALBP1Q15311 655 aa23.93■■□□□ 1.42
SEH1L-202ENST00000399892 CRB1P82279 1406 aa23.92■■□□□ 1.42
SEH1L-202ENST00000399892 NLRP2Q9NX02 1062 aa23.92■■□□□ 1.42
SEH1L-202ENST00000399892 PARD3Q8TEW0 1356 aa23.92■■□□□ 1.42
SEH1L-202ENST00000399892 SPATA31A5Q5VU36 1347 aa23.91■■□□□ 1.42
SEH1L-202ENST00000399892 SPATA31A7Q8IWB4 1347 aa23.91■■□□□ 1.42
SEH1L-202ENST00000399892 FAM208AQ9UK61 1670 aaKnown RBP23.9■■□□□ 1.42
SEH1L-202ENST00000399892 CDK12Q9NYV4 1490 aaPredicted RBP23.9■■□□□ 1.42
SEH1L-202ENST00000399892 PPP2R1AP30153 589 aa23.89■■□□□ 1.42
SEH1L-202ENST00000399892 SPATA31A1Q5TZJ5 1347 aa23.89■■□□□ 1.42
SEH1L-202ENST00000399892 A0A0G2JS52 829 aa23.88■■□□□ 1.41
SEH1L-202ENST00000399892 MYT1Q01538 1121 aa23.88■■□□□ 1.41
SEH1L-202ENST00000399892 CFAP53Q96M91 514 aa23.87■■□□□ 1.41
SEH1L-202ENST00000399892 GLI3P10071 1580 aa23.87■■□□□ 1.41
SEH1L-202ENST00000399892 TCP11L2Q8N4U5 519 aa23.87■■□□□ 1.41
SEH1L-202ENST00000399892 CARD10Q9BWT7 1032 aa23.87■■□□□ 1.41
SEH1L-202ENST00000399892 RGPD2P0DJD1 1756 aa23.86■■□□□ 1.41
SEH1L-202ENST00000399892 ANP32CO43423 234 aa23.86■■□□□ 1.41
SEH1L-202ENST00000399892 PRKRIP1Q9H875 184 aaPredicted RBP23.86■■□□□ 1.41
SEH1L-202ENST00000399892 FAM98CQ17RN3 349 aaKnown RBP23.85■■□□□ 1.41
SEH1L-202ENST00000399892 THRAP3Q9Y2W1 955 aaKnown RBP23.85■■□□□ 1.41
SEH1L-202ENST00000399892 EIF4A2Q14240 407 aaKnown RBP23.84■■□□□ 1.41
SEH1L-202ENST00000399892 MYBBP1AQ9BQG0 1328 aaKnown RBP23.83■■□□□ 1.41
SEH1L-202ENST00000399892 DIAPH1O60610 1272 aaKnown RBP23.81■■□□□ 1.4
SEH1L-202ENST00000399892 NBPF6Q5VWK0 638 aa23.81■■□□□ 1.4
SEH1L-202ENST00000399892 NBPF4Q96M43 638 aa23.81■■□□□ 1.4
SEH1L-202ENST00000399892 BARGINQ6ZT62 677 aa23.8■■□□□ 1.4
SEH1L-202ENST00000399892 USHBP1Q8N6Y0 703 aa23.8■■□□□ 1.4
SEH1L-202ENST00000399892 EYA1Q99502 592 aa23.78■■□□□ 1.4
SEH1L-202ENST00000399892 SEPT12Q8IYM1 358 aa23.77■■□□□ 1.4
SEH1L-202ENST00000399892 WNK3Q9BYP7 1800 aa23.77■■□□□ 1.4
SEH1L-202ENST00000399892 CDCA7Q9BWT1 371 aaPredicted RBP23.77■■□□□ 1.4
SEH1L-202ENST00000399892 ONECUT3O60422 494 aaPredicted RBP23.76■■□□□ 1.39
SEH1L-202ENST00000399892 IL2RBP14784 551 aa23.76■■□□□ 1.39
SEH1L-202ENST00000399892 IL13P35225 146 aa23.76■■□□□ 1.39
SEH1L-202ENST00000399892 RGS12O14924 1447 aa23.76■■□□□ 1.39
SEH1L-202ENST00000399892 U2SURPO15042 1029 aaKnown RBP23.75■■□□□ 1.39
SEH1L-202ENST00000399892 RAPGEF4Q8WZA2 1011 aa23.75■■□□□ 1.39
SEH1L-202ENST00000399892 NUDCQ9Y266 331 aa23.75■■□□□ 1.39
SEH1L-202ENST00000399892 COL3A1P02461 1466 aaPredicted RBP23.73■■□□□ 1.39
SEH1L-202ENST00000399892 IGSF1Q8N6C5 1336 aa23.73■■□□□ 1.39
SEH1L-202ENST00000399892 THSD7AQ9UPZ6 1657 aa23.73■■□□□ 1.39
SEH1L-202ENST00000399892 DIEXFQ68CQ4 756 aaKnown RBP23.73■■□□□ 1.39
SEH1L-202ENST00000399892 BRWD3Q6RI45 1802 aa23.72■■□□□ 1.39
SEH1L-202ENST00000399892 PARP4Q9UKK3 1724 aaKnown RBP23.71■■□□□ 1.39
SEH1L-202ENST00000399892 TATP17735 454 aaPredicted RBP23.71■■□□□ 1.39
SEH1L-202ENST00000399892 DDB1Q16531 1140 aa23.71■■□□□ 1.39
SEH1L-202ENST00000399892 PDE3BQ13370 1112 aa23.7■■□□□ 1.39
SEH1L-202ENST00000399892 SULT6B1Q6IMI4 303 aa23.7■■□□□ 1.39
SEH1L-202ENST00000399892 EXOC5O00471 708 aa23.7■■□□□ 1.38
SEH1L-202ENST00000399892 RGPD1P0DJD0 1748 aa23.7■■□□□ 1.38
SEH1L-202ENST00000399892 DISP2A7MBM2 1401 aa23.69■■□□□ 1.38
SEH1L-202ENST00000399892 NCAPD2Q15021 1401 aa23.68■■□□□ 1.38
SEH1L-202ENST00000399892 HMOX1P09601 288 aa23.68■■□□□ 1.38
SEH1L-202ENST00000399892 U2AF1L5P0DN76 240 aaPredicted RBP23.68■■□□□ 1.38
SEH1L-202ENST00000399892 U2AF1Q01081 240 aaKnown RBP eCLIP23.68■■□□□ 1.382e-8■■■□□ 14.9
SEH1L-202ENST00000399892 KRT27Q7Z3Y8 459 aa23.68■■□□□ 1.38
SEH1L-202ENST00000399892 LRRC37A3O60309 1634 aa23.67■■□□□ 1.38
SEH1L-202ENST00000399892 MEGF6O75095 1541 aa23.67■■□□□ 1.38
SEH1L-202ENST00000399892 ILDR2Q71H61 639 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms