RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 ZKSCAN1P17029 563 aaPredicted RBP13.17□□□□□ -0.3
CACNA1C-217ENST00000399641 SART3Q15020 963 aaKnown RBP13.17□□□□□ -0.3
CACNA1C-217ENST00000399641 HMOX1P09601 288 aa13.17□□□□□ -0.3
CACNA1C-217ENST00000399641 ZNF710Q8N1W2 664 aa13.17□□□□□ -0.3
CACNA1C-217ENST00000399641 PIBF1Q8WXW3 757 aa13.17□□□□□ -0.3
CACNA1C-217ENST00000399641 DRC1Q96MC2 740 aa13.17□□□□□ -0.3
CACNA1C-217ENST00000399641 SMC3Q9UQE7 1217 aa13.17□□□□□ -0.3
CACNA1C-217ENST00000399641 ATXN8OSP0DMR3 200 aa13.16□□□□□ -0.3
CACNA1C-217ENST00000399641 ZNF622Q969S3 477 aaKnown RBP eCLIP13.16□□□□□ -0.3
CACNA1C-217ENST00000399641 DNA2P51530 1060 aa13.16□□□□□ -0.3
CACNA1C-217ENST00000399641 MIA2Q96PC5 1412 aa13.16□□□□□ -0.3
CACNA1C-217ENST00000399641 ZNF652Q9Y2D9 606 aa13.16□□□□□ -0.3
CACNA1C-217ENST00000399641 ARL1P40616 181 aaPredicted RBP13.16□□□□□ -0.3
CACNA1C-217ENST00000399641 RPGRQ92834 1020 aaKnown RBP13.16□□□□□ -0.3
CACNA1C-217ENST00000399641 SLC26A8Q96RN1 970 aa13.15□□□□□ -0.3
CACNA1C-217ENST00000399641 TRIM5Q9C035 493 aa13.15□□□□□ -0.3
CACNA1C-217ENST00000399641 RNF187Q5TA31 235 aaPredicted RBP13.15□□□□□ -0.3
CACNA1C-217ENST00000399641 RNF20Q5VTR2 975 aa13.15□□□□□ -0.3
CACNA1C-217ENST00000399641 LRRCC1Q9C099 1032 aa13.15□□□□□ -0.3
CACNA1C-217ENST00000399641 TTC36A6NLP5 189 aa13.14□□□□□ -0.31
CACNA1C-217ENST00000399641 ZC3H6P61129 1189 aaKnown RBP13.14□□□□□ -0.31
CACNA1C-217ENST00000399641 NFKBIBQ15653 356 aa13.14□□□□□ -0.31
CACNA1C-217ENST00000399641 CHMP5Q9NZZ3 219 aa13.14□□□□□ -0.31
CACNA1C-217ENST00000399641 CTNNBL1Q8WYA6 563 aaPredicted RBP13.14□□□□□ -0.31
CACNA1C-217ENST00000399641 CRACR2BQ8N4Y2 399 aaPredicted RBP13.14□□□□□ -0.31
CACNA1C-217ENST00000399641 SETD5Q9C0A6 1442 aa13.14□□□□□ -0.31
CACNA1C-217ENST00000399641 TERF1P54274 439 aa13.13□□□□□ -0.31
CACNA1C-217ENST00000399641 BANK1Q8NDB2 785 aa13.13□□□□□ -0.31
CACNA1C-217ENST00000399641 FHOD3Q2V2M9 1422 aa13.13□□□□□ -0.31
CACNA1C-217ENST00000399641 SSBP05455 408 aaKnown RBP eCLIP13.13□□□□□ -0.31
CACNA1C-217ENST00000399641 ZNF76P36508 570 aa13.13□□□□□ -0.31
CACNA1C-217ENST00000399641 SKOR2Q2VWA4 1001 aaPredicted RBP13.13□□□□□ -0.31
CACNA1C-217ENST00000399641 ZMYND15Q9H091 742 aa13.13□□□□□ -0.31
CACNA1C-217ENST00000399641 RIPK4P57078 832 aa13.13□□□□□ -0.31
CACNA1C-217ENST00000399641 SEPT6Q14141 434 aa13.13□□□□□ -0.31
CACNA1C-217ENST00000399641 SDF4Q9BRK5 362 aa13.13□□□□□ -0.31
CACNA1C-217ENST00000399641 ANKIB1Q9P2G1 1089 aa13.13□□□□□ -0.31
CACNA1C-217ENST00000399641 CABP2Q9NPB3 220 aa13.13□□□□□ -0.31
CACNA1C-217ENST00000399641 TSHZ2Q9NRE2 1034 aa13.13□□□□□ -0.31
CACNA1C-217ENST00000399641 FANCD2Q9BXW9 1451 aa13.12□□□□□ -0.31
CACNA1C-217ENST00000399641 LIG1P18858 919 aa13.12□□□□□ -0.31
CACNA1C-217ENST00000399641 FILIP1LQ4L180 1135 aa13.12□□□□□ -0.31
CACNA1C-217ENST00000399641 WWC3Q9ULE0 1092 aa13.12□□□□□ -0.31
CACNA1C-217ENST00000399641 C8orf37Q96NL8 207 aa13.12□□□□□ -0.31
CACNA1C-217ENST00000399641 ST20-MTHFSA0A0A6YYL1 179 aa13.12□□□□□ -0.31
CACNA1C-217ENST00000399641 E9PSI1 815 aa13.12□□□□□ -0.31
CACNA1C-217ENST00000399641 MTHFSP49914 203 aa13.12□□□□□ -0.31
CACNA1C-217ENST00000399641 CCDC158Q5M9N0 1113 aa13.12□□□□□ -0.31
CACNA1C-217ENST00000399641 NAT10Q9H0A0 1025 aaKnown RBP13.12□□□□□ -0.31
CACNA1C-217ENST00000399641 SERPINC1P01008 464 aa13.11□□□□□ -0.31
CACNA1C-217ENST00000399641 STAC3Q96MF2 364 aa13.11□□□□□ -0.31
CACNA1C-217ENST00000399641 FAM184BQ9ULE4 1060 aa13.11□□□□□ -0.31
CACNA1C-217ENST00000399641 ERC2O15083 957 aa13.11□□□□□ -0.31
CACNA1C-217ENST00000399641 ECM2O94769 699 aaPredicted RBP13.11□□□□□ -0.31
CACNA1C-217ENST00000399641 PPP6R1Q9UPN7 881 aa13.11□□□□□ -0.31
CACNA1C-217ENST00000399641 DNAI2Q9GZS0 605 aa13.11□□□□□ -0.31
CACNA1C-217ENST00000399641 IGHMBP2P38935 993 aaKnown RBP13.11□□□□□ -0.31
CACNA1C-217ENST00000399641 PRDM2Q13029 1718 aa13.1□□□□□ -0.31
CACNA1C-217ENST00000399641 MACROD2A1Z1Q3 448 aa13.1□□□□□ -0.31
CACNA1C-217ENST00000399641 ATP2C2O75185 946 aa13.1□□□□□ -0.31
CACNA1C-217ENST00000399641 STARD3NLO95772 234 aa13.1□□□□□ -0.31
CACNA1C-217ENST00000399641 PANK3Q9H999 370 aa13.1□□□□□ -0.31
CACNA1C-217ENST00000399641 MYL6BP14649 208 aa13.1□□□□□ -0.31
CACNA1C-217ENST00000399641 TMOD3Q9NYL9 352 aa13.1□□□□□ -0.31
CACNA1C-217ENST00000399641 RABEP1Q15276 862 aa13.1□□□□□ -0.31
CACNA1C-217ENST00000399641 ZNF354CQ86Y25 554 aa13.09□□□□□ -0.31
CACNA1C-217ENST00000399641 GAS2L2Q8NHY3 880 aa13.09□□□□□ -0.31
CACNA1C-217ENST00000399641 ZNHIT6Q9NWK9 470 aaKnown RBP13.09□□□□□ -0.31
CACNA1C-217ENST00000399641 CCDC39Q9UFE4 941 aa13.09□□□□□ -0.31
CACNA1C-217ENST00000399641 PABPN1LA6NDY0 278 aaKnown RBP13.09□□□□□ -0.31
CACNA1C-217ENST00000399641 FAM161AQ3B820 660 aa13.09□□□□□ -0.31
CACNA1C-217ENST00000399641 NUCB2P80303 420 aa13.09□□□□□ -0.31
CACNA1C-217ENST00000399641 PPP4R3AQ6IN85 833 aa13.08□□□□□ -0.31
CACNA1C-217ENST00000399641 ZBTB9Q96C00 473 aa13.08□□□□□ -0.31
CACNA1C-217ENST00000399641 STK3Q13188 491 aa13.08□□□□□ -0.32
CACNA1C-217ENST00000399641 TMEM132EQ6IEE7 984 aa13.08□□□□□ -0.32
CACNA1C-217ENST00000399641 ERC1Q8IUD2 1116 aa13.08□□□□□ -0.32
CACNA1C-217ENST00000399641 UBTFL1P0CB47 393 aaPredicted RBP13.08□□□□□ -0.32
CACNA1C-217ENST00000399641 DESP17661 470 aa13.08□□□□□ -0.32
CACNA1C-217ENST00000399641 CCDC178Q5BJE1 867 aa13.08□□□□□ -0.32
CACNA1C-217ENST00000399641 NAP1L3Q99457 506 aaPredicted RBP13.08□□□□□ -0.32
CACNA1C-217ENST00000399641 ABCC8Q09428 1581 aa13.08□□□□□ -0.32
CACNA1C-217ENST00000399641 MYO1BO43795 1136 aa13.08□□□□□ -0.32
CACNA1C-217ENST00000399641 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.07□□□□□ -0.32
CACNA1C-217ENST00000399641 ZNF530Q6P9A1 599 aaPredicted RBP13.07□□□□□ -0.32
CACNA1C-217ENST00000399641 RAI14Q9P0K7 980 aa13.07□□□□□ -0.32
CACNA1C-217ENST00000399641 DAAM2Q86T65 1068 aa13.07□□□□□ -0.32
CACNA1C-217ENST00000399641 ROCK1Q13464 1354 aa13.07□□□□□ -0.32
CACNA1C-217ENST00000399641 SH3BP5O60239 455 aa13.07□□□□□ -0.32
CACNA1C-217ENST00000399641 LMOD1P29536 600 aaPredicted RBP13.07□□□□□ -0.32
CACNA1C-217ENST00000399641 CCDC57Q2TAC2 916 aa13.07□□□□□ -0.32
CACNA1C-217ENST00000399641 TRMT1LQ7Z2T5 733 aaKnown RBP13.07□□□□□ -0.32
CACNA1C-217ENST00000399641 GGNBP2Q9H3C7 697 aa13.07□□□□□ -0.32
CACNA1C-217ENST00000399641 EXOC5O00471 708 aa13.06□□□□□ -0.32
CACNA1C-217ENST00000399641 PSMC4P43686 418 aa13.06□□□□□ -0.32
CACNA1C-217ENST00000399641 CFAP58Q5T655 872 aa13.06□□□□□ -0.32
CACNA1C-217ENST00000399641 RFC4P35249 363 aa13.06□□□□□ -0.32
CACNA1C-217ENST00000399641 PPFIBP1Q86W92 1011 aa13.06□□□□□ -0.32
CACNA1C-217ENST00000399641 RBM28Q9NW13 759 aaKnown RBP13.06□□□□□ -0.32
CACNA1C-217ENST00000399641 API5Q9BZZ5 524 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms