RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 ADAMTS12P58397 1594 aa9.58□□□□□ -0.88
USP47-203ENST00000399455 MYO1BO43795 1136 aa9.58□□□□□ -0.88
USP47-203ENST00000399455 TRIM21P19474 475 aaKnown RBP9.58□□□□□ -0.88
USP47-203ENST00000399455 CDK5RAP3Q96JB5 506 aa9.58□□□□□ -0.88
USP47-203ENST00000399455 NCOA1Q15788 1441 aa9.58□□□□□ -0.88
USP47-203ENST00000399455 GNAI2P04899 355 aa9.58□□□□□ -0.88
USP47-203ENST00000399455 MPRIPQ6WCQ1 1025 aa9.58□□□□□ -0.88
USP47-203ENST00000399455 LRRC59Q96AG4 307 aaKnown RBP9.58□□□□□ -0.88
USP47-203ENST00000399455 NOP58Q9Y2X3 529 aaKnown RBP9.58□□□□□ -0.88
USP47-203ENST00000399455 EPS15P42566 896 aa9.57□□□□□ -0.88
USP47-203ENST00000399455 THOC2Q8NI27 1593 aaKnown RBP9.57□□□□□ -0.88
USP47-203ENST00000399455 A2MP01023 1474 aa9.57□□□□□ -0.88
USP47-203ENST00000399455 WASLO00401 505 aaPredicted RBP9.57□□□□□ -0.88
USP47-203ENST00000399455 FOXO3O43524 673 aa9.57□□□□□ -0.88
USP47-203ENST00000399455 FBXO31Q5XUX0 539 aaPredicted RBP9.57□□□□□ -0.88
USP47-203ENST00000399455 PLCH2O75038 1416 aa9.56□□□□□ -0.88
USP47-203ENST00000399455 TWISTNBQ3B726 338 aaPredicted RBP9.56□□□□□ -0.88
USP47-203ENST00000399455 MPHOSPH6Q99547 160 aaKnown RBP9.56□□□□□ -0.88
USP47-203ENST00000399455 ODF2Q5BJF6 829 aa9.56□□□□□ -0.88
USP47-203ENST00000399455 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.56□□□□□ -0.882e-6■■■■■ 96.1
USP47-203ENST00000399455 AMER1Q5JTC6 1135 aaPredicted RBP9.56□□□□□ -0.88
USP47-203ENST00000399455 AKAP2Q9Y2D5 859 aa9.56□□□□□ -0.88
USP47-203ENST00000399455 ZNF622Q969S3 477 aaKnown RBP eCLIP9.56□□□□□ -0.883e-7■■□□□ 12.5
USP47-203ENST00000399455 RAI14Q9P0K7 980 aa9.56□□□□□ -0.88
USP47-203ENST00000399455 RRS1Q15050 365 aaKnown RBP9.55□□□□□ -0.88
USP47-203ENST00000399455 SOGA3Q5TF21 947 aa9.55□□□□□ -0.88
USP47-203ENST00000399455 CRACR2BQ8N4Y2 399 aaPredicted RBP9.55□□□□□ -0.88
USP47-203ENST00000399455 SRCIN1Q9C0H9 1055 aa9.55□□□□□ -0.88
USP47-203ENST00000399455 ABCC10Q5T3U5 1492 aa9.55□□□□□ -0.88
USP47-203ENST00000399455 WAPLQ7Z5K2 1190 aa9.55□□□□□ -0.88
USP47-203ENST00000399455 BRD4O60885 1362 aaPredicted RBP9.55□□□□□ -0.88
USP47-203ENST00000399455 NCKAP5LQ9HCH0 1330 aa9.55□□□□□ -0.88
USP47-203ENST00000399455 PPP1R42Q7Z4L9 355 aa9.55□□□□□ -0.88
USP47-203ENST00000399455 STK32BQ9NY57 414 aa9.55□□□□□ -0.88
USP47-203ENST00000399455 C11orf95C9JLR9 678 aaPredicted RBP9.55□□□□□ -0.88
USP47-203ENST00000399455 CLEC11AQ9Y240 323 aa9.55□□□□□ -0.88
USP47-203ENST00000399455 TNIP1Q15025 636 aa9.55□□□□□ -0.88
USP47-203ENST00000399455 SURF6O75683 361 aaKnown RBP9.54□□□□□ -0.88
USP47-203ENST00000399455 NF2P35240 595 aa9.54□□□□□ -0.88
USP47-203ENST00000399455 TXLNAP40222 546 aa9.54□□□□□ -0.88
USP47-203ENST00000399455 PARP3Q9Y6F1 533 aa9.54□□□□□ -0.88
USP47-203ENST00000399455 TTC21BQ7Z4L5 1316 aa9.54□□□□□ -0.88
USP47-203ENST00000399455 GOLGA6L19H0YKK7 550 aa9.54□□□□□ -0.88
USP47-203ENST00000399455 PRKRIP1Q9H875 184 aaPredicted RBP9.54□□□□□ -0.88
USP47-203ENST00000399455 RIMS2Q9UQ26 1411 aa9.54□□□□□ -0.88
USP47-203ENST00000399455 RRP12Q5JTH9 1297 aaKnown RBP9.54□□□□□ -0.88
USP47-203ENST00000399455 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.54□□□□□ -0.88
USP47-203ENST00000399455 CT47A1Q5JQC4 288 aaPredicted RBP9.54□□□□□ -0.88
USP47-203ENST00000399455 HDAC9Q9UKV0 1011 aa9.54□□□□□ -0.88
USP47-203ENST00000399455 DDX46Q7L014 1031 aaKnown RBP9.54□□□□□ -0.88
USP47-203ENST00000399455 TMEM87AQ8NBN3 555 aa9.54□□□□□ -0.88
USP47-203ENST00000399455 CCDC70Q6NSX1 233 aa9.54□□□□□ -0.88
USP47-203ENST00000399455 SLKQ9H2G2 1235 aaPredicted RBP9.54□□□□□ -0.88
USP47-203ENST00000399455 SLC12A5Q9H2X9 1139 aa9.54□□□□□ -0.88
USP47-203ENST00000399455 COG6Q9Y2V7 657 aa9.54□□□□□ -0.88
USP47-203ENST00000399455 CCDC69A6NI79 296 aa9.53□□□□□ -0.88
USP47-203ENST00000399455 IPO7O95373 1038 aaKnown RBP9.53□□□□□ -0.88
USP47-203ENST00000399455 IFIT1P09914 478 aaKnown RBP9.53□□□□□ -0.88
USP47-203ENST00000399455 LRP2BPQ9P2M1 347 aa9.53□□□□□ -0.88
USP47-203ENST00000399455 NSD3Q9BZ95 1437 aa9.53□□□□□ -0.88
USP47-203ENST00000399455 LMOD1P29536 600 aaPredicted RBP9.53□□□□□ -0.88
USP47-203ENST00000399455 IFNL2Q8IZJ0 200 aa9.53□□□□□ -0.88
USP47-203ENST00000399455 SLC4A2P04920 1241 aa9.53□□□□□ -0.88
USP47-203ENST00000399455 ATF7IPQ6VMQ6 1270 aa9.53□□□□□ -0.88
USP47-203ENST00000399455 FMNL2Q96PY5 1086 aa9.53□□□□□ -0.88
USP47-203ENST00000399455 EHMT1Q9H9B1 1298 aa9.53□□□□□ -0.88
USP47-203ENST00000399455 CEP126Q9P2H0 1117 aa9.53□□□□□ -0.88
USP47-203ENST00000399455 SPDYE4A6NLX3 237 aa9.53□□□□□ -0.88
USP47-203ENST00000399455 CDCA7Q9BWT1 371 aaPredicted RBP9.53□□□□□ -0.88
USP47-203ENST00000399455 KIAA0556O60303 1618 aa9.53□□□□□ -0.88
USP47-203ENST00000399455 PPP2R1AP30153 589 aa9.53□□□□□ -0.88
USP47-203ENST00000399455 FCHSD2O94868 740 aa9.53□□□□□ -0.88
USP47-203ENST00000399455 KRT18P05783 430 aaKnown RBP9.53□□□□□ -0.88
USP47-203ENST00000399455 CT47B1P0C2W7 299 aaPredicted RBP9.53□□□□□ -0.88
USP47-203ENST00000399455 SLC5A1P13866 664 aa9.53□□□□□ -0.88
USP47-203ENST00000399455 DDB1Q16531 1140 aa9.52□□□□□ -0.88
USP47-203ENST00000399455 KIF7Q2M1P5 1343 aa9.52□□□□□ -0.88
USP47-203ENST00000399455 TTC21AQ8NDW8 1320 aa9.52□□□□□ -0.88
USP47-203ENST00000399455 ABCC2Q92887 1545 aa9.52□□□□□ -0.88
USP47-203ENST00000399455 DZIP1Q86YF9 867 aaKnown RBP9.52□□□□□ -0.89
USP47-203ENST00000399455 USP5P45974 858 aa9.52□□□□□ -0.89
USP47-203ENST00000399455 RDXP35241 583 aaKnown RBP9.52□□□□□ -0.89
USP47-203ENST00000399455 LARP1Q6PKG0 1096 aaKnown RBP9.52□□□□□ -0.89
USP47-203ENST00000399455 PAF1Q8N7H5 531 aa9.52□□□□□ -0.89
USP47-203ENST00000399455 CDC5LQ99459 802 aaKnown RBP9.52□□□□□ -0.89
USP47-203ENST00000399455 PTCD1O75127 700 aaKnown RBP9.52□□□□□ -0.89
USP47-203ENST00000399455 RRP1P56182 461 aaKnown RBP9.52□□□□□ -0.89
USP47-203ENST00000399455 METTL24Q5JXM2 366 aa9.52□□□□□ -0.89
USP47-203ENST00000399455 C19orf44Q9H6X5 657 aa9.52□□□□□ -0.89
USP47-203ENST00000399455 ZBED9Q6R2W3 1325 aa9.52□□□□□ -0.89
USP47-203ENST00000399455 ZNF76P36508 570 aa9.51□□□□□ -0.89
USP47-203ENST00000399455 ZNF219Q9P2Y4 722 aaPredicted RBP9.51□□□□□ -0.89
USP47-203ENST00000399455 PPP4R3AQ6IN85 833 aa9.51□□□□□ -0.89
USP47-203ENST00000399455 NYXQ9GZU5 481 aa9.51□□□□□ -0.89
USP47-203ENST00000399455 ATP10AO60312 1499 aa9.51□□□□□ -0.89
USP47-203ENST00000399455 BECN2A8MW95 431 aa9.51□□□□□ -0.89
USP47-203ENST00000399455 TDO2P48775 406 aa9.51□□□□□ -0.89
USP47-203ENST00000399455 GOLGA6L1Q8N7Z2 621 aa9.51□□□□□ -0.89
USP47-203ENST00000399455 SMC3Q9UQE7 1217 aa9.51□□□□□ -0.89
USP47-203ENST00000399455 NOS1P29475 1434 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms