RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 RGPD1P0DJD0 1748 aa20.85■□□□□ 0.93
SMIM11A-203ENST00000399299 ZBTB7CA1YPR0 619 aa20.85■□□□□ 0.93
SMIM11A-203ENST00000399299 NME9Q86XW9 330 aa20.85■□□□□ 0.93
SMIM11A-203ENST00000399299 USP35Q9P2H5 1018 aa20.85■□□□□ 0.93
SMIM11A-203ENST00000399299 OVOS2A0A0J9YW53 1432 aa20.85■□□□□ 0.93
SMIM11A-203ENST00000399299 OVOS2Q6IE36 1432 aa20.85■□□□□ 0.93
SMIM11A-203ENST00000399299 ANKRD36BQ8N2N9 1353 aa20.85■□□□□ 0.93
SMIM11A-203ENST00000399299 CDCA8Q53HL2 280 aa20.84■□□□□ 0.93
SMIM11A-203ENST00000399299 LTN1O94822 1766 aa20.84■□□□□ 0.93
SMIM11A-203ENST00000399299 WNK3Q9BYP7 1800 aa20.83■□□□□ 0.93
SMIM11A-203ENST00000399299 WDR17Q8IZU2 1322 aa20.83■□□□□ 0.93
SMIM11A-203ENST00000399299 ZRANB1Q9UGI0 708 aa20.83■□□□□ 0.93
SMIM11A-203ENST00000399299 AXIN2Q9Y2T1 843 aa20.83■□□□□ 0.93
SMIM11A-203ENST00000399299 SOX12O15370 315 aa20.82■□□□□ 0.92
SMIM11A-203ENST00000399299 SF3B2Q13435 895 aaKnown RBP20.82■□□□□ 0.92
SMIM11A-203ENST00000399299 TNS1Q9HBL0 1735 aaKnown RBP20.8■□□□□ 0.92
SMIM11A-203ENST00000399299 MYOM1P52179 1685 aa20.8■□□□□ 0.92
SMIM11A-203ENST00000399299 TOM1L2Q6ZVM7 507 aa20.79■□□□□ 0.92
SMIM11A-203ENST00000399299 LRRC37A3O60309 1634 aa20.78■□□□□ 0.92
SMIM11A-203ENST00000399299 PDE3BQ13370 1112 aa20.77■□□□□ 0.92
SMIM11A-203ENST00000399299 FAM182BQ5T319 152 aa20.77■□□□□ 0.92
SMIM11A-203ENST00000399299 FAM196AQ6ZSG2 479 aa20.77■□□□□ 0.92
SMIM11A-203ENST00000399299 DISP2A7MBM2 1401 aa20.77■□□□□ 0.91
SMIM11A-203ENST00000399299 BAG6P46379 1132 aa20.76■□□□□ 0.91
SMIM11A-203ENST00000399299 DEFB132Q7Z7B7 95 aa20.76■□□□□ 0.91
SMIM11A-203ENST00000399299 CARD10Q9BWT7 1032 aa20.76■□□□□ 0.91
SMIM11A-203ENST00000399299 CCDC7Q96M83 1385 aa20.74■□□□□ 0.91
SMIM11A-203ENST00000399299 KIF20BQ96Q89 1820 aa20.74■□□□□ 0.91
SMIM11A-203ENST00000399299 CSB-PGBD3P0DP91 1061 aa20.74■□□□□ 0.91
SMIM11A-203ENST00000399299 COG3Q96JB2 828 aa20.74■□□□□ 0.91
SMIM11A-203ENST00000399299 CDCA7Q9BWT1 371 aaPredicted RBP20.74■□□□□ 0.91
SMIM11A-203ENST00000399299 PEAK1Q9H792 1746 aa20.74■□□□□ 0.91
SMIM11A-203ENST00000399299 ERBB3P21860 1342 aa20.74■□□□□ 0.91
SMIM11A-203ENST00000399299 C11orf95C9JLR9 678 aaPredicted RBP20.73■□□□□ 0.91
SMIM11A-203ENST00000399299 FAM208AQ9UK61 1670 aaKnown RBP20.73■□□□□ 0.91
SMIM11A-203ENST00000399299 EIF4G2P78344 907 aaKnown RBP eCLIP20.71■□□□□ 0.91
SMIM11A-203ENST00000399299 OVOS2A0A0G2JMS6 1433 aa20.7■□□□□ 0.9
SMIM11A-203ENST00000399299 DDB1Q16531 1140 aa20.7■□□□□ 0.9
SMIM11A-203ENST00000399299 FYB1O15117 783 aa20.69■□□□□ 0.9
SMIM11A-203ENST00000399299 IP6K1Q92551 441 aa20.69■□□□□ 0.9
SMIM11A-203ENST00000399299 TRIM37O94972 964 aa20.68■□□□□ 0.9
SMIM11A-203ENST00000399299 SBF2Q86WG5 1849 aa20.68■□□□□ 0.9
SMIM11A-203ENST00000399299 ANKRD24Q8TF21 1146 aa20.67■□□□□ 0.9
SMIM11A-203ENST00000399299 BCL9O00512 1426 aa20.67■□□□□ 0.9
SMIM11A-203ENST00000399299 HSPA5P11021 654 aaKnown RBP20.66■□□□□ 0.9
SMIM11A-203ENST00000399299 EN1Q05925 392 aaPredicted RBP20.66■□□□□ 0.9
SMIM11A-203ENST00000399299 GGNBP2Q9H3C7 697 aa20.66■□□□□ 0.9
SMIM11A-203ENST00000399299 MAP3K19Q56UN5 1328 aa20.66■□□□□ 0.9
SMIM11A-203ENST00000399299 RTL1A6NKG5 1358 aa20.66■□□□□ 0.9
SMIM11A-203ENST00000399299 PARD3Q8TEW0 1356 aa20.66■□□□□ 0.9
SMIM11A-203ENST00000399299 TNS2Q63HR2 1409 aa20.66■□□□□ 0.9
SMIM11A-203ENST00000399299 NSD3Q9BZ95 1437 aa20.66■□□□□ 0.9
SMIM11A-203ENST00000399299 NLRP2Q9NX02 1062 aa20.65■□□□□ 0.9
SMIM11A-203ENST00000399299 CARD14Q9BXL6 1004 aa20.64■□□□□ 0.89
SMIM11A-203ENST00000399299 RREB1Q92766 1687 aa20.64■□□□□ 0.89
SMIM11A-203ENST00000399299 HOXC9P31274 260 aa20.63■□□□□ 0.89
SMIM11A-203ENST00000399299 RGPD3A6NKT7 1758 aaPredicted RBP20.63■□□□□ 0.89
SMIM11A-203ENST00000399299 RGPD4Q7Z3J3 1758 aa20.63■□□□□ 0.89
SMIM11A-203ENST00000399299 SRCAPQ6ZRS2 3230 aa20.62■□□□□ 0.89
SMIM11A-203ENST00000399299 CAMKK2Q96RR4 588 aa20.62■□□□□ 0.89
SMIM11A-203ENST00000399299 KIF24Q5T7B8 1368 aa20.61■□□□□ 0.89
SMIM11A-203ENST00000399299 EXOC5O00471 708 aa20.61■□□□□ 0.89
SMIM11A-203ENST00000399299 APBA3O96018 575 aa20.61■□□□□ 0.89
SMIM11A-203ENST00000399299 AMPHP49418 695 aa20.61■□□□□ 0.89
SMIM11A-203ENST00000399299 MARCH10Q8NA82 808 aaPredicted RBP20.61■□□□□ 0.89
SMIM11A-203ENST00000399299 IL2RBP14784 551 aa20.6■□□□□ 0.89
SMIM11A-203ENST00000399299 FBLN1P23142 703 aa20.6■□□□□ 0.89
SMIM11A-203ENST00000399299 EZH2Q15910 746 aaKnown RBP20.6■□□□□ 0.89
SMIM11A-203ENST00000399299 ANKRD26Q9UPS8 1709 aa20.59■□□□□ 0.89
SMIM11A-203ENST00000399299 RGPD2P0DJD1 1756 aa20.59■□□□□ 0.89
SMIM11A-203ENST00000399299 NUP188Q5SRE5 1749 aa20.58■□□□□ 0.89
SMIM11A-203ENST00000399299 CGNL1Q0VF96 1302 aa20.58■□□□□ 0.89
SMIM11A-203ENST00000399299 RRS1Q15050 365 aaKnown RBP20.58■□□□□ 0.89
SMIM11A-203ENST00000399299 FLT4P35916 1363 aa20.57■□□□□ 0.88
SMIM11A-203ENST00000399299 LTV1Q96GA3 475 aaPredicted RBP20.56■□□□□ 0.88
SMIM11A-203ENST00000399299 POLR3GLQ9BT43 218 aa20.56■□□□□ 0.88
SMIM11A-203ENST00000399299 BCL11BQ9C0K0 894 aaPredicted RBP20.56■□□□□ 0.88
SMIM11A-203ENST00000399299 NHSQ6T4R5 1651 aa20.55■□□□□ 0.88
SMIM11A-203ENST00000399299 SMG6Q86US8 1419 aaKnown RBP20.55■□□□□ 0.88
SMIM11A-203ENST00000399299 INSRP06213 1382 aa20.55■□□□□ 0.88
SMIM11A-203ENST00000399299 PLSCR1O15162 318 aa20.54■□□□□ 0.88
SMIM11A-203ENST00000399299 MAP2P11137 1827 aaKnown RBP20.53■□□□□ 0.88
SMIM11A-203ENST00000399299 LRP5O75197 1615 aa20.53■□□□□ 0.88
SMIM11A-203ENST00000399299 SHANK3Q9BYB0 1731 aa20.5■□□□□ 0.87
SMIM11A-203ENST00000399299 PSDA5PKW4 1024 aaPredicted RBP20.5■□□□□ 0.87
SMIM11A-203ENST00000399299 HSP90AB2PQ58FF8 381 aa20.5■□□□□ 0.87
SMIM11A-203ENST00000399299 NSD2O96028 1365 aa20.49■□□□□ 0.87
SMIM11A-203ENST00000399299 MEGF6O75095 1541 aa20.49■□□□□ 0.87
SMIM11A-203ENST00000399299 NBPF6Q5VWK0 638 aa20.49■□□□□ 0.87
SMIM11A-203ENST00000399299 PTF1AQ7RTS3 328 aa20.49■□□□□ 0.87
SMIM11A-203ENST00000399299 NBPF4Q96M43 638 aa20.49■□□□□ 0.87
SMIM11A-203ENST00000399299 PANK3Q9H999 370 aa20.49■□□□□ 0.87
SMIM11A-203ENST00000399299 EMILIN1Q9Y6C2 1016 aa20.49■□□□□ 0.87
SMIM11A-203ENST00000399299 R3HDM1Q15032 1099 aaKnown RBP20.48■□□□□ 0.87
SMIM11A-203ENST00000399299 BTAF1O14981 1849 aa20.46■□□□□ 0.87
SMIM11A-203ENST00000399299 NBPF14Q5TI25 921 aa20.46■□□□□ 0.87
SMIM11A-203ENST00000399299 WASHC2AQ641Q2 1341 aa20.46■□□□□ 0.87
SMIM11A-203ENST00000399299 NCAPD2Q15021 1401 aa20.45■□□□□ 0.86
SMIM11A-203ENST00000399299 KCNQ2O43526 872 aa20.44■□□□□ 0.86
SMIM11A-203ENST00000399299 ZCRB1Q8TBF4 217 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms