RNA–Protein interactions for RNA: ENST00000399240.5

RUNX1-205, Transcript of runt related transcription factor 1, human

TSL 3 BASIC

Gene RUNX1, Length 1,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUNX1-205	ENST00000399240	KIF24	Q5T7B8	1368 aa		32.95	■■■□□ 2.86
RUNX1-205	ENST00000399240	COL14A1	Q05707	1796 aa	Known RBP	32.94	■■■□□ 2.86
RUNX1-205	ENST00000399240	HOXC9	P31274	260 aa		32.94	■■■□□ 2.86
RUNX1-205	ENST00000399240	RTL1	A6NKG5	1358 aa		32.94	■■■□□ 2.86
RUNX1-205	ENST00000399240	FAM83G	A6ND36	823 aa		32.93	■■■□□ 2.86
RUNX1-205	ENST00000399240	ABCC6	O95255	1503 aa		32.93	■■■□□ 2.86
RUNX1-205	ENST00000399240	HSP90AB2P	Q58FF8	381 aa		32.92	■■■□□ 2.86
RUNX1-205	ENST00000399240	IP6K1	Q92551	441 aa		32.92	■■■□□ 2.86
RUNX1-205	ENST00000399240	AXIN2	Q9Y2T1	843 aa		32.92	■■■□□ 2.86
RUNX1-205	ENST00000399240	PLCH1	Q4KWH8	1693 aa		32.92	■■■□□ 2.86
RUNX1-205	ENST00000399240	COL3A1	P02461	1466 aa	Predicted RBP	32.92	■■■□□ 2.86
RUNX1-205	ENST00000399240	CAMTA1	Q9Y6Y1	1673 aa		32.9	■■■□□ 2.86
RUNX1-205	ENST00000399240	INSR	P06213	1382 aa		32.89	■■■□□ 2.86
RUNX1-205	ENST00000399240	BLM	P54132	1417 aa	Predicted RBP	32.87	■■■□□ 2.85
RUNX1-205	ENST00000399240	ILDR1	Q86SU0	546 aa	Predicted RBP	32.86	■■■□□ 2.85
RUNX1-205	ENST00000399240	CFAP53	Q96M91	514 aa		32.84	■■■□□ 2.85
RUNX1-205	ENST00000399240	CCER2	I3L3R5	266 aa		32.83	■■■□□ 2.85
RUNX1-205	ENST00000399240	RGPD2	P0DJD1	1756 aa		32.83	■■■□□ 2.85
RUNX1-205	ENST00000399240	C8orf37	Q96NL8	207 aa		32.83	■■■□□ 2.85
RUNX1-205	ENST00000399240	MRS2	Q9HD23	443 aa		32.83	■■■□□ 2.85
RUNX1-205	ENST00000399240	NWD2	Q9ULI1	1742 aa		32.83	■■■□□ 2.85
RUNX1-205	ENST00000399240	NRAP	Q86VF7	1730 aa		32.82	■■■□□ 2.84
RUNX1-205	ENST00000399240	COL5A2	P05997	1499 aa	Predicted RBP	32.81	■■■□□ 2.84
RUNX1-205	ENST00000399240	EIF4A2	Q14240	407 aa	Known RBP	32.81	■■■□□ 2.84
RUNX1-205	ENST00000399240	LTV1	Q96GA3	475 aa	Predicted RBP	32.81	■■■□□ 2.84
RUNX1-205	ENST00000399240	BTG4	Q9NY30	223 aa		32.81	■■■□□ 2.84
RUNX1-205	ENST00000399240	SLIT2	O94813	1529 aa		32.81	■■■□□ 2.84
RUNX1-205	ENST00000399240	MEX3C	Q5U5Q3	659 aa	Known RBP	32.79	■■■□□ 2.84
RUNX1-205	ENST00000399240	ERBB3	P21860	1342 aa		32.79	■■■□□ 2.84
RUNX1-205	ENST00000399240	DIAPH1	O60610	1272 aa	Known RBP	32.79	■■■□□ 2.84
RUNX1-205	ENST00000399240	ANKRD24	Q8TF21	1146 aa		32.79	■■■□□ 2.84
RUNX1-205	ENST00000399240	IL13	P35225	146 aa		32.78	■■■□□ 2.84
RUNX1-205	ENST00000399240	NGLY1	Q96IV0	654 aa		32.78	■■■□□ 2.84
RUNX1-205	ENST00000399240	RGPD1	P0DJD0	1748 aa		32.77	■■■□□ 2.84
RUNX1-205	ENST00000399240	FAM208A	Q9UK61	1670 aa	Known RBP	32.75	■■■□□ 2.83
RUNX1-205	ENST00000399240	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32.73	■■■□□ 2.83
RUNX1-205	ENST00000399240	STRN4	Q9NRL3	753 aa		32.73	■■■□□ 2.83
RUNX1-205	ENST00000399240	BCL9L	Q86UU0	1499 aa		32.72	■■■□□ 2.83
RUNX1-205	ENST00000399240	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.71	■■■□□ 2.83
RUNX1-205	ENST00000399240	WDR17	Q8IZU2	1322 aa		32.7	■■■□□ 2.83
RUNX1-205	ENST00000399240	EVA1C	P58658	441 aa		32.7	■■■□□ 2.82
RUNX1-205	ENST00000399240	PNISR	Q8TF01	805 aa	Known RBP	32.7	■■■□□ 2.82
RUNX1-205	ENST00000399240	CSB-PGBD3	P0DP91	1061 aa		32.69	■■■□□ 2.82
RUNX1-205	ENST00000399240	LARP1	Q6PKG0	1096 aa	Known RBP	32.69	■■■□□ 2.82
RUNX1-205	ENST00000399240	EYA1	Q99502	592 aa		32.69	■■■□□ 2.82
RUNX1-205	ENST00000399240	U2SURP	O15042	1029 aa	Known RBP	32.68	■■■□□ 2.82
RUNX1-205	ENST00000399240	NBPF6	Q5VWK0	638 aa		32.68	■■■□□ 2.82
RUNX1-205	ENST00000399240	NBPF4	Q96M43	638 aa		32.68	■■■□□ 2.82
RUNX1-205	ENST00000399240	AFF2	P51816	1311 aa		32.68	■■■□□ 2.82
RUNX1-205	ENST00000399240	NUDC	Q9Y266	331 aa		32.67	■■■□□ 2.82
RUNX1-205	ENST00000399240	UNC5CL	Q8IV45	518 aa		32.66	■■■□□ 2.82
RUNX1-205	ENST00000399240	IGSF1	Q8N6C5	1336 aa		32.65	■■■□□ 2.82
RUNX1-205	ENST00000399240	USP21	Q9UK80	565 aa		32.65	■■■□□ 2.82
RUNX1-205	ENST00000399240	TOM1L2	Q6ZVM7	507 aa		32.64	■■■□□ 2.82
RUNX1-205	ENST00000399240	USHBP1	Q8N6Y0	703 aa		32.64	■■■□□ 2.82
RUNX1-205	ENST00000399240	NLRP2	Q9NX02	1062 aa		32.64	■■■□□ 2.82
RUNX1-205	ENST00000399240	CRB1	P82279	1406 aa		32.64	■■■□□ 2.82
RUNX1-205	ENST00000399240	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.62	■■■□□ 2.81
RUNX1-205	ENST00000399240	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.62	■■■□□ 2.81	3e-8	■■■■■ 28.3
RUNX1-205	ENST00000399240	WDR43	Q15061	677 aa	Known RBP eCLIP	32.62	■■■□□ 2.81
RUNX1-205	ENST00000399240	NCAPD2	Q15021	1401 aa		32.62	■■■□□ 2.81
RUNX1-205	ENST00000399240	AEBP1	Q8IUX7	1158 aa		32.62	■■■□□ 2.81
RUNX1-205	ENST00000399240	ADAMTS8	Q9UP79	889 aa		32.62	■■■□□ 2.81
RUNX1-205	ENST00000399240	HMOX1	P09601	288 aa		32.61	■■■□□ 2.81
RUNX1-205	ENST00000399240	FAM9B	Q8IZU0	186 aa		32.6	■■■□□ 2.81
RUNX1-205	ENST00000399240	SULT6B1	Q6IMI4	303 aa		32.59	■■■□□ 2.81
RUNX1-205	ENST00000399240	KDR	P35968	1356 aa		32.59	■■■□□ 2.81
RUNX1-205	ENST00000399240	CARD10	Q9BWT7	1032 aa		32.58	■■■□□ 2.81
RUNX1-205	ENST00000399240	USP35	Q9P2H5	1018 aa		32.57	■■■□□ 2.8
RUNX1-205	ENST00000399240	VPS72	Q15906	364 aa		32.56	■■■□□ 2.8
RUNX1-205	ENST00000399240	RSPH6A	Q9H0K4	717 aa		32.54	■■■□□ 2.8
RUNX1-205	ENST00000399240	WNK3	Q9BYP7	1800 aa		32.54	■■■□□ 2.8
RUNX1-205	ENST00000399240	SPATA31A1	Q5TZJ5	1347 aa		32.54	■■■□□ 2.8
RUNX1-205	ENST00000399240	SPATA31A5	Q5VU36	1347 aa		32.54	■■■□□ 2.8
RUNX1-205	ENST00000399240	SPATA31A7	Q8IWB4	1347 aa		32.54	■■■□□ 2.8
RUNX1-205	ENST00000399240	ATRN	O75882	1429 aa		32.53	■■■□□ 2.8
RUNX1-205	ENST00000399240	CCDC9	Q9Y3X0	531 aa	Known RBP	32.52	■■■□□ 2.8
RUNX1-205	ENST00000399240	FCHSD2	O94868	740 aa		32.51	■■■□□ 2.79
RUNX1-205	ENST00000399240	GLI3	P10071	1580 aa		32.5	■■■□□ 2.79
RUNX1-205	ENST00000399240	MEGF6	O75095	1541 aa		32.49	■■■□□ 2.79
RUNX1-205	ENST00000399240	PRKAR2B	P31323	418 aa		32.49	■■■□□ 2.79
RUNX1-205	ENST00000399240	TRPC5	Q9UL62	973 aa	Predicted RBP	32.49	■■■□□ 2.79
RUNX1-205	ENST00000399240	CCDC146	Q8IYE0	955 aa		32.48	■■■□□ 2.79
RUNX1-205	ENST00000399240	TCP11L2	Q8N4U5	519 aa		32.48	■■■□□ 2.79
RUNX1-205	ENST00000399240	PARP4	Q9UKK3	1724 aa	Known RBP	32.47	■■■□□ 2.79
RUNX1-205	ENST00000399240	PLEKHF1	Q96S99	279 aa		32.47	■■■□□ 2.79
RUNX1-205	ENST00000399240	QTRT2	Q9H974	415 aa	Known RBP	32.47	■■■□□ 2.79
RUNX1-205	ENST00000399240	RGS17	Q9UGC6	210 aa	Predicted RBP	32.47	■■■□□ 2.79
RUNX1-205	ENST00000399240	ZNF772	Q68DY9	489 aa	Predicted RBP	32.46	■■■□□ 2.79
RUNX1-205	ENST00000399240	GJD4	Q96KN9	370 aa	Predicted RBP	32.45	■■■□□ 2.78
RUNX1-205	ENST00000399240	DISP2	A7MBM2	1401 aa		32.44	■■■□□ 2.78
RUNX1-205	ENST00000399240	PHACTR3	Q96KR7	559 aa		32.44	■■■□□ 2.78
RUNX1-205	ENST00000399240	THRAP3	Q9Y2W1	955 aa	Known RBP	32.43	■■■□□ 2.78
RUNX1-205	ENST00000399240	IL2RB	P14784	551 aa		32.42	■■■□□ 2.78
RUNX1-205	ENST00000399240	RAPGEF4	Q8WZA2	1011 aa		32.42	■■■□□ 2.78
RUNX1-205	ENST00000399240	PKD1L3	Q7Z443	1732 aa		32.41	■■■□□ 2.78
RUNX1-205	ENST00000399240	RUNDC1	Q96C34	613 aa		32.41	■■■□□ 2.78
RUNX1-205	ENST00000399240	PHF23	Q9BUL5	403 aa	Predicted RBP	32.41	■■■□□ 2.78
RUNX1-205	ENST00000399240	OVOS2	A0A0G2JMS6	1433 aa		32.4	■■■□□ 2.78
RUNX1-205	ENST00000399240	TAT	P17735	454 aa	Predicted RBP	32.4	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms