RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 USP21Q9UK80 565 aa13.82□□□□□ -0.2
MSL3-207ENST00000398527 KIAA1210Q9ULL0 1709 aa13.82□□□□□ -0.2
MSL3-207ENST00000398527 MST1RQ04912 1400 aa13.82□□□□□ -0.2
MSL3-207ENST00000398527 ADAMTS2O95450 1211 aa13.81□□□□□ -0.2
MSL3-207ENST00000398527 PSEN1P49768 467 aa13.81□□□□□ -0.2
MSL3-207ENST00000398527 FOXD4L5Q5VV16 416 aaPredicted RBP13.81□□□□□ -0.2
MSL3-207ENST00000398527 FOXD4L4Q8WXT5 416 aaPredicted RBP13.81□□□□□ -0.2
MSL3-207ENST00000398527 VGLL3A8MV65 326 aa13.81□□□□□ -0.2
MSL3-207ENST00000398527 HDGFP51858 240 aaKnown RBP13.81□□□□□ -0.2
MSL3-207ENST00000398527 MYO5BQ9ULV0 1848 aa13.81□□□□□ -0.2
MSL3-207ENST00000398527 ADAMTS13Q76LX8 1427 aa13.81□□□□□ -0.2
MSL3-207ENST00000398527 KCTD17Q8N5Z5 321 aa13.8□□□□□ -0.2
MSL3-207ENST00000398527 BLMP54132 1417 aaPredicted RBP13.8□□□□□ -0.2
MSL3-207ENST00000398527 MAPK8IP2Q13387 824 aaPredicted RBP13.79□□□□□ -0.2
MSL3-207ENST00000398527 FNBP4Q8N3X1 1017 aaPredicted RBP13.79□□□□□ -0.2
MSL3-207ENST00000398527 PTCH1Q13635 1447 aa13.79□□□□□ -0.2
MSL3-207ENST00000398527 CDCA8Q53HL2 280 aa13.79□□□□□ -0.2
MSL3-207ENST00000398527 NLRP13Q86W25 1043 aa13.79□□□□□ -0.2
MSL3-207ENST00000398527 TMC1Q8TDI8 760 aa13.79□□□□□ -0.2
MSL3-207ENST00000398527 CLTCL1P53675 1640 aa13.78□□□□□ -0.2
MSL3-207ENST00000398527 RGL3Q3MIN7 710 aa13.78□□□□□ -0.2
MSL3-207ENST00000398527 TMTC2Q8N394 836 aa13.78□□□□□ -0.2
MSL3-207ENST00000398527 PDE3BQ13370 1112 aa13.78□□□□□ -0.2
MSL3-207ENST00000398527 TMEM131LA2VDJ0 1609 aa13.77□□□□□ -0.2
MSL3-207ENST00000398527 PER1O15534 1290 aaPredicted RBP13.77□□□□□ -0.21
MSL3-207ENST00000398527 TESK2Q96S53 571 aa13.77□□□□□ -0.21
MSL3-207ENST00000398527 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.76□□□□□ -0.21
MSL3-207ENST00000398527 DDX17Q92841 729 aaKnown RBP13.76□□□□□ -0.21
MSL3-207ENST00000398527 LAS1LQ9Y4W2 734 aaKnown RBP13.76□□□□□ -0.21
MSL3-207ENST00000398527 PTPRUQ92729 1446 aa13.76□□□□□ -0.21
MSL3-207ENST00000398527 AMOTL2Q9Y2J4 779 aa13.75□□□□□ -0.21
MSL3-207ENST00000398527 HSP90AB4PQ58FF6 505 aa13.74□□□□□ -0.21
MSL3-207ENST00000398527 DEFB132Q7Z7B7 95 aa13.74□□□□□ -0.21
MSL3-207ENST00000398527 XRN1Q8IZH2 1706 aaKnown RBP13.74□□□□□ -0.21
MSL3-207ENST00000398527 NBPF1Q3BBV0 1214 aa13.73□□□□□ -0.21
MSL3-207ENST00000398527 SH3BP1Q9Y3L3 701 aa13.73□□□□□ -0.21
MSL3-207ENST00000398527 TMF1P82094 1093 aa13.73□□□□□ -0.21
MSL3-207ENST00000398527 COL22A1Q8NFW1 1626 aaPredicted RBP13.72□□□□□ -0.21
MSL3-207ENST00000398527 BCL9LQ86UU0 1499 aa13.72□□□□□ -0.21
MSL3-207ENST00000398527 NPC1L1Q9UHC9 1359 aa13.71□□□□□ -0.21
MSL3-207ENST00000398527 MYOM2P54296 1465 aa13.71□□□□□ -0.21
MSL3-207ENST00000398527 KIF1BO60333 1816 aa13.71□□□□□ -0.21
MSL3-207ENST00000398527 ADGRL3Q9HAR2 1447 aa13.7□□□□□ -0.22
MSL3-207ENST00000398527 SF3B2Q13435 895 aaKnown RBP13.7□□□□□ -0.22
MSL3-207ENST00000398527 NBPF20Q3BBV1 942 aa13.7□□□□□ -0.22
MSL3-207ENST00000398527 EGFL6Q8IUX8 553 aa13.7□□□□□ -0.22
MSL3-207ENST00000398527 SGSM3Q96HU1 749 aa13.7□□□□□ -0.22
MSL3-207ENST00000398527 GJD4Q96KN9 370 aaPredicted RBP13.7□□□□□ -0.22
MSL3-207ENST00000398527 NOP58Q9Y2X3 529 aaKnown RBP13.7□□□□□ -0.22
MSL3-207ENST00000398527 SOS2Q07890 1332 aaPredicted RBP13.69□□□□□ -0.22
MSL3-207ENST00000398527 YY1P25490 414 aa13.69□□□□□ -0.22
MSL3-207ENST00000398527 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.68□□□□□ -0.22
MSL3-207ENST00000398527 IFT172Q9UG01 1749 aa13.68□□□□□ -0.22
MSL3-207ENST00000398527 PSDA5PKW4 1024 aaPredicted RBP13.68□□□□□ -0.22
MSL3-207ENST00000398527 CC2D1BQ5T0F9 858 aaKnown RBP13.68□□□□□ -0.22
MSL3-207ENST00000398527 CARD10Q9BWT7 1032 aa13.68□□□□□ -0.22
MSL3-207ENST00000398527 MARF1Q9Y4F3 1742 aaKnown RBP13.68□□□□□ -0.22
MSL3-207ENST00000398527 NBPF11Q86T75 865 aa13.68□□□□□ -0.22
MSL3-207ENST00000398527 PDCL3Q9H2J4 239 aa13.68□□□□□ -0.22
MSL3-207ENST00000398527 C1orf167Q5SNV9 1468 aa13.68□□□□□ -0.22
MSL3-207ENST00000398527 NALCNQ8IZF0 1738 aa13.67□□□□□ -0.22
MSL3-207ENST00000398527 BRWD3Q6RI45 1802 aa13.67□□□□□ -0.22
MSL3-207ENST00000398527 EXOC8Q8IYI6 725 aa13.67□□□□□ -0.22
MSL3-207ENST00000398527 CEP120Q8N960 986 aa13.67□□□□□ -0.22
MSL3-207ENST00000398527 GLI3P10071 1580 aa13.66□□□□□ -0.22
MSL3-207ENST00000398527 EIF3AQ14152 1382 aaKnown RBP13.66□□□□□ -0.22
MSL3-207ENST00000398527 TTC36A6NLP5 189 aa13.65□□□□□ -0.22
MSL3-207ENST00000398527 NRXN1Q9ULB1 1477 aa13.65□□□□□ -0.22
MSL3-207ENST00000398527 NRXN3Q9Y4C0 1643 aa13.65□□□□□ -0.22
MSL3-207ENST00000398527 LOC102724159A0A0B4J2E5 919 aa13.64□□□□□ -0.23
MSL3-207ENST00000398527 CHGAP10645 457 aaKnown RBP13.64□□□□□ -0.23
MSL3-207ENST00000398527 PWP2Q15269 919 aaKnown RBP13.64□□□□□ -0.23
MSL3-207ENST00000398527 FOXD4L6Q3SYB3 417 aaPredicted RBP13.64□□□□□ -0.23
MSL3-207ENST00000398527 FOXD4L3Q6VB84 417 aaPredicted RBP13.64□□□□□ -0.23
MSL3-207ENST00000398527 MYOM1P52179 1685 aa13.64□□□□□ -0.23
MSL3-207ENST00000398527 PIK3C2GO75747 1445 aa13.64□□□□□ -0.23
MSL3-207ENST00000398527 B4GALNT3Q6L9W6 998 aa13.64□□□□□ -0.23
MSL3-207ENST00000398527 SEMA3FQ13275 785 aa13.63□□□□□ -0.23
MSL3-207ENST00000398527 IFFO2Q5TF58 517 aa13.63□□□□□ -0.23
MSL3-207ENST00000398527 SBNO2Q9Y2G9 1366 aa13.63□□□□□ -0.23
MSL3-207ENST00000398527 TRIM44Q96DX7 344 aaPredicted RBP13.63□□□□□ -0.23
MSL3-207ENST00000398527 PANK3Q9H999 370 aa13.62□□□□□ -0.23
MSL3-207ENST00000398527 RRP1P56182 461 aaKnown RBP13.62□□□□□ -0.23
MSL3-207ENST00000398527 SMAP1Q8IYB5 467 aaPredicted RBP13.62□□□□□ -0.23
MSL3-207ENST00000398527 BAG6P46379 1132 aa13.61□□□□□ -0.23
MSL3-207ENST00000398527 MPNDQ8N594 471 aa13.61□□□□□ -0.23
MSL3-207ENST00000398527 IRF6O14896 467 aa13.6□□□□□ -0.23
MSL3-207ENST00000398527 UNC5CLQ8IV45 518 aa13.6□□□□□ -0.23
MSL3-207ENST00000398527 PIAS4Q8N2W9 510 aaPredicted RBP13.6□□□□□ -0.23
MSL3-207ENST00000398527 RCAN3Q9UKA8 241 aa13.6□□□□□ -0.23
MSL3-207ENST00000398527 ORAI2Q96SN7 254 aa13.59□□□□□ -0.23
MSL3-207ENST00000398527 SLIT2O94813 1529 aa13.59□□□□□ -0.23
MSL3-207ENST00000398527 PPLO60437 1756 aa13.59□□□□□ -0.23
MSL3-207ENST00000398527 METP08581 1390 aa13.59□□□□□ -0.23
MSL3-207ENST00000398527 SEPT12Q8IYM1 358 aa13.59□□□□□ -0.23
MSL3-207ENST00000398527 NGEFQ8N5V2 710 aa13.59□□□□□ -0.23
MSL3-207ENST00000398527 PPP4R3BQ5MIZ7 849 aa13.58□□□□□ -0.24
MSL3-207ENST00000398527 R3HDM1Q15032 1099 aaKnown RBP13.57□□□□□ -0.24
MSL3-207ENST00000398527 UTP14CQ5TAP6 766 aaKnown RBP13.57□□□□□ -0.24
MSL3-207ENST00000398527 PXDNQ92626 1479 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms