RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 RRS1Q15050 365 aaKnown RBP21.69■■□□□ 1.06
MBD1-207ENST00000398488 GJD4Q96KN9 370 aaPredicted RBP21.69■■□□□ 1.06
MBD1-207ENST00000398488 LTN1O94822 1766 aa21.69■■□□□ 1.06
MBD1-207ENST00000398488 RBM6P78332 1123 aaKnown RBP21.68■■□□□ 1.06
MBD1-207ENST00000398488 LARP1Q6PKG0 1096 aaKnown RBP21.68■■□□□ 1.06
MBD1-207ENST00000398488 COL5A2P05997 1499 aaPredicted RBP21.67■■□□□ 1.06
MBD1-207ENST00000398488 KNSTRNQ9Y448 316 aa21.67■■□□□ 1.06
MBD1-207ENST00000398488 ANKRD26Q9UPS8 1709 aa21.65■■□□□ 1.06
MBD1-207ENST00000398488 CCDC9Q9Y3X0 531 aaKnown RBP21.65■■□□□ 1.06
MBD1-207ENST00000398488 SPATA31A5Q5VU36 1347 aa21.64■■□□□ 1.05
MBD1-207ENST00000398488 SPATA31A7Q8IWB4 1347 aa21.64■■□□□ 1.05
MBD1-207ENST00000398488 TNNT2P45379 298 aaPredicted RBP21.64■■□□□ 1.05
MBD1-207ENST00000398488 EVA1CP58658 441 aa21.64■■□□□ 1.05
MBD1-207ENST00000398488 PEAK1Q9H792 1746 aa21.63■■□□□ 1.05
MBD1-207ENST00000398488 RGS12O14924 1447 aa21.63■■□□□ 1.05
MBD1-207ENST00000398488 EMILIN1Q9Y6C2 1016 aa21.63■■□□□ 1.05
MBD1-207ENST00000398488 CNGB1Q14028 1251 aaPredicted RBP21.62■■□□□ 1.05
MBD1-207ENST00000398488 IP6K1Q92551 441 aa21.62■■□□□ 1.05
MBD1-207ENST00000398488 SPATA31A1Q5TZJ5 1347 aa21.62■■□□□ 1.05
MBD1-207ENST00000398488 HOXC9P31274 260 aa21.61■■□□□ 1.05
MBD1-207ENST00000398488 CC2D1BQ5T0F9 858 aaKnown RBP21.61■■□□□ 1.05
MBD1-207ENST00000398488 NSD2O96028 1365 aa21.61■■□□□ 1.05
MBD1-207ENST00000398488 USP35Q9P2H5 1018 aa21.6■■□□□ 1.05
MBD1-207ENST00000398488 ABCC6O95255 1503 aa21.6■■□□□ 1.05
MBD1-207ENST00000398488 POLKQ9UBT6 870 aa21.6■■□□□ 1.05
MBD1-207ENST00000398488 AMPHP49418 695 aa21.59■■□□□ 1.05
MBD1-207ENST00000398488 FAM98CQ17RN3 349 aaKnown RBP21.59■■□□□ 1.05
MBD1-207ENST00000398488 MORC1Q86VD1 984 aa21.59■■□□□ 1.05
MBD1-207ENST00000398488 WDR17Q8IZU2 1322 aa21.59■■□□□ 1.05
MBD1-207ENST00000398488 CDK12Q9NYV4 1490 aaPredicted RBP21.58■■□□□ 1.05
MBD1-207ENST00000398488 DDX10Q13206 875 aaKnown RBP21.58■■□□□ 1.04
MBD1-207ENST00000398488 HSP90AB2PQ58FF8 381 aa21.58■■□□□ 1.04
MBD1-207ENST00000398488 ANKRD24Q8TF21 1146 aa21.58■■□□□ 1.04
MBD1-207ENST00000398488 LTV1Q96GA3 475 aaPredicted RBP21.58■■□□□ 1.04
MBD1-207ENST00000398488 MAP2P11137 1827 aaKnown RBP21.57■■□□□ 1.04
MBD1-207ENST00000398488 ONECUT3O60422 494 aaPredicted RBP21.57■■□□□ 1.04
MBD1-207ENST00000398488 ERBB3P21860 1342 aa21.57■■□□□ 1.04
MBD1-207ENST00000398488 CRB1P82279 1406 aa21.57■■□□□ 1.04
MBD1-207ENST00000398488 CSB-PGBD3P0DP91 1061 aa21.55■■□□□ 1.04
MBD1-207ENST00000398488 TOM1L2Q6ZVM7 507 aa21.55■■□□□ 1.04
MBD1-207ENST00000398488 BLMP54132 1417 aaPredicted RBP21.55■■□□□ 1.04
MBD1-207ENST00000398488 PPM1GO15355 546 aaPredicted RBP21.55■■□□□ 1.04
MBD1-207ENST00000398488 SEPT12Q8IYM1 358 aa21.55■■□□□ 1.04
MBD1-207ENST00000398488 NPC1L1Q9UHC9 1359 aa21.54■■□□□ 1.04
MBD1-207ENST00000398488 RTL1A6NKG5 1358 aa21.54■■□□□ 1.04
MBD1-207ENST00000398488 TCP11L2Q8N4U5 519 aa21.53■■□□□ 1.04
MBD1-207ENST00000398488 FLT4P35916 1363 aa21.52■■□□□ 1.04
MBD1-207ENST00000398488 CARD10Q9BWT7 1032 aa21.52■■□□□ 1.04
MBD1-207ENST00000398488 RGPD2P0DJD1 1756 aa21.52■■□□□ 1.04
MBD1-207ENST00000398488 INSRP06213 1382 aa21.51■■□□□ 1.03
MBD1-207ENST00000398488 BRWD3Q6RI45 1802 aa21.51■■□□□ 1.03
MBD1-207ENST00000398488 ZNF316A6NFI3 1004 aaPredicted RBP21.51■■□□□ 1.03
MBD1-207ENST00000398488 NLRP2Q9NX02 1062 aa21.51■■□□□ 1.03
MBD1-207ENST00000398488 THSD7AQ9UPZ6 1657 aa21.51■■□□□ 1.03
MBD1-207ENST00000398488 BARGINQ6ZT62 677 aa21.5■■□□□ 1.03
MBD1-207ENST00000398488 SMG6Q86US8 1419 aaKnown RBP21.49■■□□□ 1.03
MBD1-207ENST00000398488 KIF24Q5T7B8 1368 aa21.49■■□□□ 1.03
MBD1-207ENST00000398488 NBPF6Q5VWK0 638 aa21.49■■□□□ 1.03
MBD1-207ENST00000398488 NBPF4Q96M43 638 aa21.49■■□□□ 1.03
MBD1-207ENST00000398488 A0A0G2JS52 829 aa21.47■■□□□ 1.03
MBD1-207ENST00000398488 MYT1Q01538 1121 aa21.47■■□□□ 1.03
MBD1-207ENST00000398488 USHBP1Q8N6Y0 703 aa21.47■■□□□ 1.03
MBD1-207ENST00000398488 THRAP3Q9Y2W1 955 aaKnown RBP21.47■■□□□ 1.03
MBD1-207ENST00000398488 DISP2A7MBM2 1401 aa21.46■■□□□ 1.03
MBD1-207ENST00000398488 MTHFSP49914 203 aa21.45■■□□□ 1.02
MBD1-207ENST00000398488 FAM182BQ5T319 152 aa21.45■■□□□ 1.02
MBD1-207ENST00000398488 FAM208AQ9UK61 1670 aaKnown RBP21.45■■□□□ 1.02
MBD1-207ENST00000398488 EIF4A2Q14240 407 aaKnown RBP21.45■■□□□ 1.02
MBD1-207ENST00000398488 WNK3Q9BYP7 1800 aa21.44■■□□□ 1.02
MBD1-207ENST00000398488 KRT27Q7Z3Y8 459 aa21.42■■□□□ 1.02
MBD1-207ENST00000398488 EYA1Q99502 592 aa21.42■■□□□ 1.02
MBD1-207ENST00000398488 PARP4Q9UKK3 1724 aaKnown RBP21.41■■□□□ 1.02
MBD1-207ENST00000398488 SOCS7O14512 581 aa21.41■■□□□ 1.02
MBD1-207ENST00000398488 LRRC37A3O60309 1634 aa21.41■■□□□ 1.02
MBD1-207ENST00000398488 PPP2R1AP30153 589 aa21.4■■□□□ 1.02
MBD1-207ENST00000398488 PARD3Q8TEW0 1356 aa21.4■■□□□ 1.02
MBD1-207ENST00000398488 EP400Q96L91 3159 aa21.39■■□□□ 1.01
MBD1-207ENST00000398488 MEGF6O75095 1541 aa21.38■■□□□ 1.01
MBD1-207ENST00000398488 IL2RBP14784 551 aa21.38■■□□□ 1.01
MBD1-207ENST00000398488 IL13P35225 146 aa21.38■■□□□ 1.01
MBD1-207ENST00000398488 NCAPD2Q15021 1401 aa21.37■■□□□ 1.01
MBD1-207ENST00000398488 COL3A1P02461 1466 aaPredicted RBP21.36■■□□□ 1.01
MBD1-207ENST00000398488 DDB1Q16531 1140 aa21.36■■□□□ 1.01
MBD1-207ENST00000398488 MARCH10Q8NA82 808 aaPredicted RBP21.35■■□□□ 1.01
MBD1-207ENST00000398488 UPF1Q92900 1129 aaKnown RBP eCLIP21.35■■□□□ 1.01
MBD1-207ENST00000398488 PDE3BQ13370 1112 aa21.34■■□□□ 1.01
MBD1-207ENST00000398488 CDCA7Q9BWT1 371 aaPredicted RBP21.34■■□□□ 1.01
MBD1-207ENST00000398488 AEBP1Q8IUX7 1158 aa21.34■■□□□ 1.01
MBD1-207ENST00000398488 IGSF1Q8N6C5 1336 aa21.34■■□□□ 1.01
MBD1-207ENST00000398488 EXOC5O00471 708 aa21.33■■□□□ 1
MBD1-207ENST00000398488 RGPD1P0DJD0 1748 aa21.33■■□□□ 1
MBD1-207ENST00000398488 TNS2Q63HR2 1409 aa21.32■■□□□ 1
MBD1-207ENST00000398488 OVOS2A0A0G2JMS6 1433 aa21.31■■□□□ 1
MBD1-207ENST00000398488 SHANK3Q9BYB0 1731 aa21.3■■□□□ 1
MBD1-207ENST00000398488 DIAPH1O60610 1272 aaKnown RBP21.29■■□□□ 1
MBD1-207ENST00000398488 RAPGEF4Q8WZA2 1011 aa21.29■■□□□ 1
MBD1-207ENST00000398488 RALBP1Q15311 655 aa21.28■■□□□ 1
MBD1-207ENST00000398488 PTF1AQ7RTS3 328 aa21.28■■□□□ 1
MBD1-207ENST00000398488 PRKRIP1Q9H875 184 aaPredicted RBP21.28■■□□□ 1
MBD1-207ENST00000398488 TATP17735 454 aaPredicted RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms