RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 PEAK1Q9H792 1746 aa31.85■■■□□ 2.69
TSPAN4-203ENST00000397397 AFF2P51816 1311 aa31.85■■■□□ 2.69
TSPAN4-203ENST00000397397 FAM83GA6ND36 823 aa31.83■■■□□ 2.69
TSPAN4-203ENST00000397397 RTL1A6NKG5 1358 aa31.82■■■□□ 2.68
TSPAN4-203ENST00000397397 KIF24Q5T7B8 1368 aa31.82■■■□□ 2.68
TSPAN4-203ENST00000397397 ZNF772Q68DY9 489 aaPredicted RBP31.82■■■□□ 2.68
TSPAN4-203ENST00000397397 COL18A1P39060 1754 aa31.81■■■□□ 2.68
TSPAN4-203ENST00000397397 COL14A1Q05707 1796 aaKnown RBP31.81■■■□□ 2.68
TSPAN4-203ENST00000397397 FLT4P35916 1363 aa31.81■■■□□ 2.68
TSPAN4-203ENST00000397397 HOXC9P31274 260 aa31.81■■■□□ 2.68
TSPAN4-203ENST00000397397 IP6K1Q92551 441 aa31.81■■■□□ 2.68
TSPAN4-203ENST00000397397 CDK12Q9NYV4 1490 aaPredicted RBP31.8■■■□□ 2.68
TSPAN4-203ENST00000397397 MIER1Q8N108 512 aa31.79■■■□□ 2.68
TSPAN4-203ENST00000397397 ABCC6O95255 1503 aa31.79■■■□□ 2.68
TSPAN4-203ENST00000397397 RGPD5Q99666 1765 aa31.78■■■□□ 2.68
TSPAN4-203ENST00000397397 LMO7Q8WWI1 1683 aa31.77■■■□□ 2.68
TSPAN4-203ENST00000397397 HSP90AB2PQ58FF8 381 aa31.76■■■□□ 2.68
TSPAN4-203ENST00000397397 NGLY1Q96IV0 654 aa31.76■■■□□ 2.68
TSPAN4-203ENST00000397397 CFAP53Q96M91 514 aa31.76■■■□□ 2.68
TSPAN4-203ENST00000397397 AXIN2Q9Y2T1 843 aa31.76■■■□□ 2.68
TSPAN4-203ENST00000397397 PLCH1Q4KWH8 1693 aa31.74■■■□□ 2.67
TSPAN4-203ENST00000397397 BLMP54132 1417 aaPredicted RBP31.74■■■□□ 2.67
TSPAN4-203ENST00000397397 INSRP06213 1382 aa31.73■■■□□ 2.67
TSPAN4-203ENST00000397397 CAMTA1Q9Y6Y1 1673 aa31.73■■■□□ 2.67
TSPAN4-203ENST00000397397 BTG4Q9NY30 223 aa31.72■■■□□ 2.67
TSPAN4-203ENST00000397397 LTV1Q96GA3 475 aaPredicted RBP31.71■■■□□ 2.67
TSPAN4-203ENST00000397397 COL3A1P02461 1466 aaPredicted RBP31.69■■■□□ 2.66
TSPAN4-203ENST00000397397 NWD2Q9ULI1 1742 aa31.68■■■□□ 2.66
TSPAN4-203ENST00000397397 CCDC184Q52MB2 194 aa31.68■■■□□ 2.66
TSPAN4-203ENST00000397397 FNBP4Q8N3X1 1017 aaPredicted RBP31.68■■■□□ 2.66
TSPAN4-203ENST00000397397 ANKRD24Q8TF21 1146 aa31.68■■■□□ 2.66
TSPAN4-203ENST00000397397 USP21Q9UK80 565 aa31.67■■■□□ 2.66
TSPAN4-203ENST00000397397 SLIT2O94813 1529 aa31.67■■■□□ 2.66
TSPAN4-203ENST00000397397 DIAPH1O60610 1272 aaKnown RBP31.66■■■□□ 2.66
TSPAN4-203ENST00000397397 EVA1CP58658 441 aa31.66■■■□□ 2.66
TSPAN4-203ENST00000397397 EIF4A2Q14240 407 aaKnown RBP31.66■■■□□ 2.66
TSPAN4-203ENST00000397397 QTRT2Q9H974 415 aaKnown RBP31.66■■■□□ 2.66
TSPAN4-203ENST00000397397 MRS2Q9HD23 443 aa31.66■■■□□ 2.66
TSPAN4-203ENST00000397397 STRN4Q9NRL3 753 aa31.66■■■□□ 2.66
TSPAN4-203ENST00000397397 COL5A2P05997 1499 aaPredicted RBP31.66■■■□□ 2.66
TSPAN4-203ENST00000397397 CCER2I3L3R5 266 aa31.65■■■□□ 2.66
TSPAN4-203ENST00000397397 ERBB3P21860 1342 aa31.64■■■□□ 2.66
TSPAN4-203ENST00000397397 CSB-PGBD3P0DP91 1061 aa31.64■■■□□ 2.66
TSPAN4-203ENST00000397397 RXRBP28702 533 aa31.64■■■□□ 2.66
TSPAN4-203ENST00000397397 NRAPQ86VF7 1730 aa31.64■■■□□ 2.66
TSPAN4-203ENST00000397397 IL13P35225 146 aa31.63■■■□□ 2.65
TSPAN4-203ENST00000397397 BCL9LQ86UU0 1499 aa31.62■■■□□ 2.65
TSPAN4-203ENST00000397397 WDR17Q8IZU2 1322 aa31.6■■■□□ 2.65
TSPAN4-203ENST00000397397 RGPD2P0DJD1 1756 aa31.6■■■□□ 2.65
TSPAN4-203ENST00000397397 UNC5CLQ8IV45 518 aa31.59■■■□□ 2.65
TSPAN4-203ENST00000397397 NUDCQ9Y266 331 aa31.59■■■□□ 2.65
TSPAN4-203ENST00000397397 FAM208AQ9UK61 1670 aaKnown RBP31.59■■■□□ 2.65
TSPAN4-203ENST00000397397 U2SURPO15042 1029 aaKnown RBP31.58■■■□□ 2.65
TSPAN4-203ENST00000397397 LARP1Q6PKG0 1096 aaKnown RBP31.58■■■□□ 2.65
TSPAN4-203ENST00000397397 ATRNO75882 1429 aa31.57■■■□□ 2.65
TSPAN4-203ENST00000397397 TOM1L2Q6ZVM7 507 aa31.57■■■□□ 2.64
TSPAN4-203ENST00000397397 NLRP2Q9NX02 1062 aa31.57■■■□□ 2.64
TSPAN4-203ENST00000397397 TRPC5Q9UL62 973 aaPredicted RBP31.57■■■□□ 2.64
TSPAN4-203ENST00000397397 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.57■■■□□ 2.64
TSPAN4-203ENST00000397397 RBM6P78332 1123 aaKnown RBP31.56■■■□□ 2.64
TSPAN4-203ENST00000397397 EYA1Q99502 592 aa31.55■■■□□ 2.64
TSPAN4-203ENST00000397397 NBPF6Q5VWK0 638 aa31.54■■■□□ 2.64
TSPAN4-203ENST00000397397 NBPF4Q96M43 638 aa31.54■■■□□ 2.64
TSPAN4-203ENST00000397397 RGPD1P0DJD0 1748 aa31.54■■■□□ 2.64
TSPAN4-203ENST00000397397 WDR43Q15061 677 aaKnown RBP eCLIP31.53■■■□□ 2.64
TSPAN4-203ENST00000397397 CRB1P82279 1406 aa31.53■■■□□ 2.64
TSPAN4-203ENST00000397397 U2AF1L5P0DN76 240 aaPredicted RBP31.51■■■□□ 2.64
TSPAN4-203ENST00000397397 U2AF1Q01081 240 aaKnown RBP eCLIP31.51■■■□□ 2.64
TSPAN4-203ENST00000397397 USHBP1Q8N6Y0 703 aa31.51■■■□□ 2.64
TSPAN4-203ENST00000397397 IGSF1Q8N6C5 1336 aa31.51■■■□□ 2.64
TSPAN4-203ENST00000397397 RGS12O14924 1447 aa31.51■■■□□ 2.63
TSPAN4-203ENST00000397397 CARD10Q9BWT7 1032 aa31.5■■■□□ 2.63
TSPAN4-203ENST00000397397 CCDC9Q9Y3X0 531 aaKnown RBP31.5■■■□□ 2.63
TSPAN4-203ENST00000397397 VPS72Q15906 364 aa31.49■■■□□ 2.63
TSPAN4-203ENST00000397397 PNISRQ8TF01 805 aaKnown RBP31.49■■■□□ 2.63
TSPAN4-203ENST00000397397 USP35Q9P2H5 1018 aa31.48■■■□□ 2.63
TSPAN4-203ENST00000397397 HMOX1P09601 288 aa31.47■■■□□ 2.63
TSPAN4-203ENST00000397397 SULT6B1Q6IMI4 303 aa31.47■■■□□ 2.63
TSPAN4-203ENST00000397397 SPATA31A5Q5VU36 1347 aa31.46■■■□□ 2.63
TSPAN4-203ENST00000397397 SPATA31A7Q8IWB4 1347 aa31.46■■■□□ 2.63
TSPAN4-203ENST00000397397 AEBP1Q8IUX7 1158 aa31.45■■■□□ 2.63
TSPAN4-203ENST00000397397 NCAPD2Q15021 1401 aa31.45■■■□□ 2.62
TSPAN4-203ENST00000397397 SPATA31A1Q5TZJ5 1347 aa31.44■■■□□ 2.62
TSPAN4-203ENST00000397397 GJD4Q96KN9 370 aaPredicted RBP31.44■■■□□ 2.62
TSPAN4-203ENST00000397397 ADAMTS8Q9UP79 889 aa31.44■■■□□ 2.62
TSPAN4-203ENST00000397397 FAM9BQ8IZU0 186 aa31.43■■■□□ 2.62
TSPAN4-203ENST00000397397 GLI3P10071 1580 aa31.42■■■□□ 2.62
TSPAN4-203ENST00000397397 TCP11L2Q8N4U5 519 aa31.41■■■□□ 2.62
TSPAN4-203ENST00000397397 KDRP35968 1356 aa31.41■■■□□ 2.62
TSPAN4-203ENST00000397397 FCHSD2O94868 740 aa31.39■■■□□ 2.62
TSPAN4-203ENST00000397397 RSPH6AQ9H0K4 717 aa31.39■■■□□ 2.62
TSPAN4-203ENST00000397397 THRAP3Q9Y2W1 955 aaKnown RBP31.39■■■□□ 2.62
TSPAN4-203ENST00000397397 RAPGEF4Q8WZA2 1011 aa31.37■■■□□ 2.61
TSPAN4-203ENST00000397397 PRKAR2BP31323 418 aa31.36■■■□□ 2.61
TSPAN4-203ENST00000397397 WNK3Q9BYP7 1800 aa31.35■■■□□ 2.61
TSPAN4-203ENST00000397397 PNNQ9H307 717 aaKnown RBP31.35■■■□□ 2.61
TSPAN4-203ENST00000397397 IL2RBP14784 551 aa31.34■■■□□ 2.61
TSPAN4-203ENST00000397397 TATP17735 454 aaPredicted RBP31.34■■■□□ 2.61
TSPAN4-203ENST00000397397 MEGF6O75095 1541 aa31.34■■■□□ 2.61
TSPAN4-203ENST00000397397 BARGINQ6ZT62 677 aa31.33■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms