RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 CPDO75976 1380 aa19.87■□□□□ 0.77
CAPN3-207ENST00000397200 FLT4P35916 1363 aa19.87■□□□□ 0.77
CAPN3-207ENST00000397200 KIAA0232Q92628 1395 aa19.86■□□□□ 0.77
CAPN3-207ENST00000397200 BLMP54132 1417 aaPredicted RBP19.85■□□□□ 0.77
CAPN3-207ENST00000397200 NUTM2BA6NNL0 878 aaPredicted RBP19.84■□□□□ 0.77
CAPN3-207ENST00000397200 NUTM2EB1AL46 878 aaPredicted RBP19.84■□□□□ 0.77
CAPN3-207ENST00000397200 NUTM2AQ8IVF1 878 aaPredicted RBP19.84■□□□□ 0.77
CAPN3-207ENST00000397200 PRDM11Q9NQV5 511 aa19.84■□□□□ 0.77
CAPN3-207ENST00000397200 SPATA31A6Q5VVP1 1343 aa19.84■□□□□ 0.77
CAPN3-207ENST00000397200 NEFLP07196 543 aa19.84■□□□□ 0.77
CAPN3-207ENST00000397200 HOXC9P31274 260 aa19.84■□□□□ 0.77
CAPN3-207ENST00000397200 ABCC6O95255 1503 aa19.83■□□□□ 0.77
CAPN3-207ENST00000397200 FKBP8Q14318 412 aa19.83■□□□□ 0.76
CAPN3-207ENST00000397200 IP6K1Q92551 441 aa19.83■□□□□ 0.76
CAPN3-207ENST00000397200 COL3A1P02461 1466 aaPredicted RBP19.82■□□□□ 0.76
CAPN3-207ENST00000397200 COL18A1P39060 1754 aa19.82■□□□□ 0.76
CAPN3-207ENST00000397200 HSP90AB2PQ58FF8 381 aa19.82■□□□□ 0.76
CAPN3-207ENST00000397200 RGPD5Q99666 1765 aa19.82■□□□□ 0.76
CAPN3-207ENST00000397200 CHRNA2Q15822 529 aa19.81■□□□□ 0.76
CAPN3-207ENST00000397200 COL14A1Q05707 1796 aaKnown RBP19.8■□□□□ 0.76
CAPN3-207ENST00000397200 DIAPH1O60610 1272 aaKnown RBP19.8■□□□□ 0.76
CAPN3-207ENST00000397200 ADAMTS2O95450 1211 aa19.8■□□□□ 0.76
CAPN3-207ENST00000397200 LMO7Q8WWI1 1683 aa19.79■□□□□ 0.76
CAPN3-207ENST00000397200 FAM83GA6ND36 823 aa19.78■□□□□ 0.76
CAPN3-207ENST00000397200 NUDCQ9Y266 331 aa19.77■□□□□ 0.76
CAPN3-207ENST00000397200 AXIN2Q9Y2T1 843 aa19.77■□□□□ 0.76
CAPN3-207ENST00000397200 LRP6O75581 1613 aa19.77■□□□□ 0.76
CAPN3-207ENST00000397200 EIF4A2Q14240 407 aaKnown RBP19.76■□□□□ 0.75
CAPN3-207ENST00000397200 PLCH1Q4KWH8 1693 aa19.76■□□□□ 0.75
CAPN3-207ENST00000397200 WDR43Q15061 677 aaKnown RBP eCLIP19.76■□□□□ 0.75
CAPN3-207ENST00000397200 LTV1Q96GA3 475 aaPredicted RBP19.76■□□□□ 0.75
CAPN3-207ENST00000397200 CAMTA1Q9Y6Y1 1673 aa19.75■□□□□ 0.75
CAPN3-207ENST00000397200 IL13P35225 146 aa19.75■□□□□ 0.75
CAPN3-207ENST00000397200 ANKRD24Q8TF21 1146 aa19.74■□□□□ 0.75
CAPN3-207ENST00000397200 U2SURPO15042 1029 aaKnown RBP19.73■□□□□ 0.75
CAPN3-207ENST00000397200 MEX3CQ5U5Q3 659 aaKnown RBP19.73■□□□□ 0.75
CAPN3-207ENST00000397200 ERICH6BQ5W0A0 696 aa19.73■□□□□ 0.75
CAPN3-207ENST00000397200 ERBB3P21860 1342 aa19.73■□□□□ 0.75
CAPN3-207ENST00000397200 FAM208AQ9UK61 1670 aaKnown RBP19.73■□□□□ 0.75
CAPN3-207ENST00000397200 BTG4Q9NY30 223 aa19.73■□□□□ 0.75
CAPN3-207ENST00000397200 NWD2Q9ULI1 1742 aa19.72■□□□□ 0.75
CAPN3-207ENST00000397200 COL5A2P05997 1499 aaPredicted RBP19.72■□□□□ 0.75
CAPN3-207ENST00000397200 RGPD1P0DJD0 1748 aa19.71■□□□□ 0.75
CAPN3-207ENST00000397200 U2AF1L5P0DN76 240 aaPredicted RBP19.71■□□□□ 0.75
CAPN3-207ENST00000397200 CSB-PGBD3P0DP91 1061 aa19.71■□□□□ 0.75
CAPN3-207ENST00000397200 U2AF1Q01081 240 aaKnown RBP eCLIP19.71■□□□□ 0.75
CAPN3-207ENST00000397200 C8orf37Q96NL8 207 aa19.71■□□□□ 0.75
CAPN3-207ENST00000397200 RGPD2P0DJD1 1756 aa19.71■□□□□ 0.75
CAPN3-207ENST00000397200 EVA1CP58658 441 aa19.69■□□□□ 0.74
CAPN3-207ENST00000397200 NGLY1Q96IV0 654 aa19.69■□□□□ 0.74
CAPN3-207ENST00000397200 RNF123Q5XPI4 1314 aa19.69■□□□□ 0.74
CAPN3-207ENST00000397200 NRAPQ86VF7 1730 aa19.69■□□□□ 0.74
CAPN3-207ENST00000397200 SLIT2O94813 1529 aa19.69■□□□□ 0.74
CAPN3-207ENST00000397200 STRN4Q9NRL3 753 aa19.69■□□□□ 0.74
CAPN3-207ENST00000397200 ADAMTS8Q9UP79 889 aa19.69■□□□□ 0.74
CAPN3-207ENST00000397200 EYA1Q99502 592 aa19.68■□□□□ 0.74
CAPN3-207ENST00000397200 WDR17Q8IZU2 1322 aa19.68■□□□□ 0.74
CAPN3-207ENST00000397200 IGSF1Q8N6C5 1336 aa19.68■□□□□ 0.74
CAPN3-207ENST00000397200 PELP1Q8IZL8 1130 aaKnown RBP19.67■□□□□ 0.74
CAPN3-207ENST00000397200 NLRP2Q9NX02 1062 aa19.67■□□□□ 0.74
CAPN3-207ENST00000397200 NBPF6Q5VWK0 638 aa19.66■□□□□ 0.74
CAPN3-207ENST00000397200 NBPF4Q96M43 638 aa19.66■□□□□ 0.74
CAPN3-207ENST00000397200 HMOX1P09601 288 aa19.65■□□□□ 0.74
CAPN3-207ENST00000397200 TOM1L2Q6ZVM7 507 aa19.65■□□□□ 0.74
CAPN3-207ENST00000397200 PDE3BQ13370 1112 aa19.65■□□□□ 0.74
CAPN3-207ENST00000397200 SULT6B1Q6IMI4 303 aa19.65■□□□□ 0.74
CAPN3-207ENST00000397200 LARP1Q6PKG0 1096 aaKnown RBP19.64■□□□□ 0.73
CAPN3-207ENST00000397200 FNBP4Q8N3X1 1017 aaPredicted RBP19.64■□□□□ 0.73
CAPN3-207ENST00000397200 USHBP1Q8N6Y0 703 aa19.64■□□□□ 0.73
CAPN3-207ENST00000397200 CRB1P82279 1406 aa19.64■□□□□ 0.73
CAPN3-207ENST00000397200 FCHSD2O94868 740 aa19.63■□□□□ 0.73
CAPN3-207ENST00000397200 UNC5CLQ8IV45 518 aa19.63■□□□□ 0.73
CAPN3-207ENST00000397200 PNNQ9H307 717 aaKnown RBP19.63■□□□□ 0.73
CAPN3-207ENST00000397200 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.63■□□□□ 0.73
CAPN3-207ENST00000397200 AEBP1Q8IUX7 1158 aa19.62■□□□□ 0.73
CAPN3-207ENST00000397200 KDRP35968 1356 aa19.62■□□□□ 0.73
CAPN3-207ENST00000397200 NCAPD2Q15021 1401 aa19.62■□□□□ 0.73
CAPN3-207ENST00000397200 RSPH6AQ9H0K4 717 aa19.62■□□□□ 0.73
CAPN3-207ENST00000397200 USP21Q9UK80 565 aa19.62■□□□□ 0.73
CAPN3-207ENST00000397200 BCL9LQ86UU0 1499 aa19.61■□□□□ 0.73
CAPN3-207ENST00000397200 AFF2P51816 1311 aa19.61■□□□□ 0.73
CAPN3-207ENST00000397200 CARD10Q9BWT7 1032 aa19.61■□□□□ 0.73
CAPN3-207ENST00000397200 PRKAR2BP31323 418 aa19.6■□□□□ 0.73
CAPN3-207ENST00000397200 CCDC146Q8IYE0 955 aa19.6■□□□□ 0.73
CAPN3-207ENST00000397200 NEFMP07197 916 aa19.59■□□□□ 0.73
CAPN3-207ENST00000397200 RUNDC1Q96C34 613 aa19.59■□□□□ 0.73
CAPN3-207ENST00000397200 ILDR1Q86SU0 546 aaPredicted RBP19.58■□□□□ 0.73
CAPN3-207ENST00000397200 MAPK8IP3Q9UPT6 1336 aa19.58■□□□□ 0.72
CAPN3-207ENST00000397200 USP35Q9P2H5 1018 aa19.58■□□□□ 0.72
CAPN3-207ENST00000397200 CCDC9Q9Y3X0 531 aaKnown RBP19.58■□□□□ 0.72
CAPN3-207ENST00000397200 PLEKHF1Q96S99 279 aa19.57■□□□□ 0.72
CAPN3-207ENST00000397200 VPS72Q15906 364 aa19.56■□□□□ 0.72
CAPN3-207ENST00000397200 RAPGEF4Q8WZA2 1011 aa19.56■□□□□ 0.72
CAPN3-207ENST00000397200 PARP4Q9UKK3 1724 aaKnown RBP19.56■□□□□ 0.72
CAPN3-207ENST00000397200 SPATA31A1Q5TZJ5 1347 aa19.55■□□□□ 0.72
CAPN3-207ENST00000397200 SPATA31A5Q5VU36 1347 aa19.55■□□□□ 0.72
CAPN3-207ENST00000397200 SPATA31A7Q8IWB4 1347 aa19.55■□□□□ 0.72
CAPN3-207ENST00000397200 WNK3Q9BYP7 1800 aa19.55■□□□□ 0.72
CAPN3-207ENST00000397200 TCP11L2Q8N4U5 519 aa19.54■□□□□ 0.72
CAPN3-207ENST00000397200 TATP17735 454 aaPredicted RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms