RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 PLEKHG5O94827 1062 aa19.77■□□□□ 0.76
TM9SF1-202ENST00000396854 JCADQ9P266 1359 aa19.77■□□□□ 0.76
TM9SF1-202ENST00000396854 AMPHP49418 695 aa19.77■□□□□ 0.75
TM9SF1-202ENST00000396854 LMO7Q8WWI1 1683 aa19.77■□□□□ 0.75
TM9SF1-202ENST00000396854 RGPD1P0DJD0 1748 aa19.77■□□□□ 0.75
TM9SF1-202ENST00000396854 HOXC9P31274 260 aa19.76■□□□□ 0.75
TM9SF1-202ENST00000396854 HNRNPUQ00839 825 aaKnown RBP eCLIP19.75■□□□□ 0.75
TM9SF1-202ENST00000396854 IP6K1Q92551 441 aa19.75■□□□□ 0.75
TM9SF1-202ENST00000396854 BLMP54132 1417 aaPredicted RBP19.75■□□□□ 0.75
TM9SF1-202ENST00000396854 ZC3H6P61129 1189 aaKnown RBP19.75■□□□□ 0.75
TM9SF1-202ENST00000396854 KIAA0232Q92628 1395 aa19.75■□□□□ 0.75
TM9SF1-202ENST00000396854 DIAPH1O60610 1272 aaKnown RBP19.74■□□□□ 0.75
TM9SF1-202ENST00000396854 HSPA1LP34931 641 aa19.74■□□□□ 0.75
TM9SF1-202ENST00000396854 HSP90AB2PQ58FF8 381 aa19.74■□□□□ 0.75
TM9SF1-202ENST00000396854 COL14A1Q05707 1796 aaKnown RBP19.73■□□□□ 0.75
TM9SF1-202ENST00000396854 HAP1P54257 671 aaPredicted RBP19.73■□□□□ 0.75
TM9SF1-202ENST00000396854 FAM208AQ9UK61 1670 aaKnown RBP19.73■□□□□ 0.75
TM9SF1-202ENST00000396854 IL13P35225 146 aa19.72■□□□□ 0.75
TM9SF1-202ENST00000396854 WDR43Q15061 677 aaKnown RBP eCLIP19.71■□□□□ 0.75
TM9SF1-202ENST00000396854 FAM9BQ8IZU0 186 aa19.71■□□□□ 0.75
TM9SF1-202ENST00000396854 NUDCQ9Y266 331 aa19.71■□□□□ 0.75
TM9SF1-202ENST00000396854 EIF4A2Q14240 407 aaKnown RBP19.71■□□□□ 0.75
TM9SF1-202ENST00000396854 CAMTA1Q9Y6Y1 1673 aa19.71■□□□□ 0.75
TM9SF1-202ENST00000396854 RGPD2P0DJD1 1756 aa19.7■□□□□ 0.74
TM9SF1-202ENST00000396854 ZBTB7CA1YPR0 619 aa19.69■□□□□ 0.74
TM9SF1-202ENST00000396854 PRDM11Q9NQV5 511 aa19.69■□□□□ 0.74
TM9SF1-202ENST00000396854 PLCH1Q4KWH8 1693 aa19.69■□□□□ 0.74
TM9SF1-202ENST00000396854 SPATA31A6Q5VVP1 1343 aa19.69■□□□□ 0.74
TM9SF1-202ENST00000396854 ADAMTS8Q9UP79 889 aa19.68■□□□□ 0.74
TM9SF1-202ENST00000396854 AXIN2Q9Y2T1 843 aa19.68■□□□□ 0.74
TM9SF1-202ENST00000396854 CHRNA2Q15822 529 aa19.67■□□□□ 0.74
TM9SF1-202ENST00000396854 NWD2Q9ULI1 1742 aa19.66■□□□□ 0.74
TM9SF1-202ENST00000396854 U2SURPO15042 1029 aaKnown RBP19.66■□□□□ 0.74
TM9SF1-202ENST00000396854 ERBB3P21860 1342 aa19.65■□□□□ 0.74
TM9SF1-202ENST00000396854 COL5A2P05997 1499 aaPredicted RBP19.65■□□□□ 0.74
TM9SF1-202ENST00000396854 FBXO41Q8TF61 875 aa19.65■□□□□ 0.74
TM9SF1-202ENST00000396854 NRAPQ86VF7 1730 aa19.65■□□□□ 0.74
TM9SF1-202ENST00000396854 U2AF1L5P0DN76 240 aaPredicted RBP19.64■□□□□ 0.74
TM9SF1-202ENST00000396854 U2AF1Q01081 240 aaKnown RBP eCLIP19.64■□□□□ 0.74
TM9SF1-202ENST00000396854 IGSF1Q8N6C5 1336 aa19.64■□□□□ 0.73
TM9SF1-202ENST00000396854 LRP6O75581 1613 aa19.64■□□□□ 0.73
TM9SF1-202ENST00000396854 FAM83GA6ND36 823 aa19.64■□□□□ 0.73
TM9SF1-202ENST00000396854 NCAPD2Q15021 1401 aa19.64■□□□□ 0.73
TM9SF1-202ENST00000396854 ANKRD24Q8TF21 1146 aa19.64■□□□□ 0.73
TM9SF1-202ENST00000396854 KDRP35968 1356 aa19.62■□□□□ 0.73
TM9SF1-202ENST00000396854 LTV1Q96GA3 475 aaPredicted RBP19.62■□□□□ 0.73
TM9SF1-202ENST00000396854 EYA1Q99502 592 aa19.62■□□□□ 0.73
TM9SF1-202ENST00000396854 NUTM2BA6NNL0 878 aaPredicted RBP19.61■□□□□ 0.73
TM9SF1-202ENST00000396854 NUTM2EB1AL46 878 aaPredicted RBP19.61■□□□□ 0.73
TM9SF1-202ENST00000396854 NUTM2AQ8IVF1 878 aaPredicted RBP19.61■□□□□ 0.73
TM9SF1-202ENST00000396854 ZBED9Q6R2W3 1325 aa19.61■□□□□ 0.73
TM9SF1-202ENST00000396854 FCHSD2O94868 740 aa19.6■□□□□ 0.73
TM9SF1-202ENST00000396854 ADAMTS2O95450 1211 aa19.6■□□□□ 0.73
TM9SF1-202ENST00000396854 ERICH6BQ5W0A0 696 aa19.6■□□□□ 0.73
TM9SF1-202ENST00000396854 RSPH6AQ9H0K4 717 aa19.6■□□□□ 0.73
TM9SF1-202ENST00000396854 SLIT2O94813 1529 aa19.59■□□□□ 0.73
TM9SF1-202ENST00000396854 WDR17Q8IZU2 1322 aa19.58■□□□□ 0.73
TM9SF1-202ENST00000396854 NBPF6Q5VWK0 638 aa19.58■□□□□ 0.73
TM9SF1-202ENST00000396854 NBPF4Q96M43 638 aa19.58■□□□□ 0.73
TM9SF1-202ENST00000396854 PLEKHF1Q96S99 279 aa19.58■□□□□ 0.73
TM9SF1-202ENST00000396854 PNNQ9H307 717 aaKnown RBP19.58■□□□□ 0.73
TM9SF1-202ENST00000396854 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.58■□□□□ 0.72
TM9SF1-202ENST00000396854 HMOX1P09601 288 aa19.58■□□□□ 0.72
TM9SF1-202ENST00000396854 SULT6B1Q6IMI4 303 aa19.58■□□□□ 0.72
TM9SF1-202ENST00000396854 RUNDC1Q96C34 613 aa19.57■□□□□ 0.72
TM9SF1-202ENST00000396854 BTG4Q9NY30 223 aa19.57■□□□□ 0.72
TM9SF1-202ENST00000396854 AEBP1Q8IUX7 1158 aa19.56■□□□□ 0.72
TM9SF1-202ENST00000396854 CCDC146Q8IYE0 955 aa19.56■□□□□ 0.72
TM9SF1-202ENST00000396854 CSB-PGBD3P0DP91 1061 aa19.55■□□□□ 0.72
TM9SF1-202ENST00000396854 PRKAR2BP31323 418 aa19.55■□□□□ 0.72
TM9SF1-202ENST00000396854 WNK3Q9BYP7 1800 aa19.54■□□□□ 0.72
TM9SF1-202ENST00000396854 CRB1P82279 1406 aa19.54■□□□□ 0.72
TM9SF1-202ENST00000396854 DLG5Q8TDM6 1919 aa19.54■□□□□ 0.72
TM9SF1-202ENST00000396854 PARP4Q9UKK3 1724 aaKnown RBP19.53■□□□□ 0.72
TM9SF1-202ENST00000396854 EVA1CP58658 441 aa19.53■□□□□ 0.72
TM9SF1-202ENST00000396854 RBM19Q9Y4C8 960 aaKnown RBP19.53■□□□□ 0.72
TM9SF1-202ENST00000396854 USHBP1Q8N6Y0 703 aa19.52■□□□□ 0.72
TM9SF1-202ENST00000396854 NLRP2Q9NX02 1062 aa19.52■□□□□ 0.72
TM9SF1-202ENST00000396854 PLEKHG2Q9H7P9 1386 aa19.52■□□□□ 0.72
TM9SF1-202ENST00000396854 MAPK8IP3Q9UPT6 1336 aa19.52■□□□□ 0.72
TM9SF1-202ENST00000396854 STRN4Q9NRL3 753 aa19.52■□□□□ 0.71
TM9SF1-202ENST00000396854 LARP1Q6PKG0 1096 aaKnown RBP19.51■□□□□ 0.71
TM9SF1-202ENST00000396854 TOM1L2Q6ZVM7 507 aa19.51■□□□□ 0.71
TM9SF1-202ENST00000396854 FNBP4Q8N3X1 1017 aaPredicted RBP19.51■□□□□ 0.71
TM9SF1-202ENST00000396854 C8orf37Q96NL8 207 aa19.51■□□□□ 0.71
TM9SF1-202ENST00000396854 CARD10Q9BWT7 1032 aa19.51■□□□□ 0.71
TM9SF1-202ENST00000396854 BCL9LQ86UU0 1499 aa19.5■□□□□ 0.71
TM9SF1-202ENST00000396854 APAF1O14727 1248 aa19.5■□□□□ 0.71
TM9SF1-202ENST00000396854 NEFMP07197 916 aa19.5■□□□□ 0.71
TM9SF1-202ENST00000396854 PKD1L3Q7Z443 1732 aa19.5■□□□□ 0.71
TM9SF1-202ENST00000396854 TCP11L2Q8N4U5 519 aa19.5■□□□□ 0.71
TM9SF1-202ENST00000396854 NCBP3Q53F19 620 aaKnown RBP19.49■□□□□ 0.71
TM9SF1-202ENST00000396854 NGLY1Q96IV0 654 aa19.49■□□□□ 0.71
TM9SF1-202ENST00000396854 PHACTR3Q96KR7 559 aa19.49■□□□□ 0.71
TM9SF1-202ENST00000396854 MEX3CQ5U5Q3 659 aaKnown RBP19.48■□□□□ 0.71
TM9SF1-202ENST00000396854 NGEFQ8N5V2 710 aa19.48■□□□□ 0.71
TM9SF1-202ENST00000396854 MEGF6O75095 1541 aa19.48■□□□□ 0.71
TM9SF1-202ENST00000396854 UNC5CLQ8IV45 518 aa19.47■□□□□ 0.71
TM9SF1-202ENST00000396854 ANP32EQ9BTT0 268 aa19.47■□□□□ 0.71
TM9SF1-202ENST00000396854 IRX6P78412 446 aaPredicted RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms