RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 COL5A2P05997 1499 aaPredicted RBP22.33■■□□□ 1.16
AP1S3-202ENST00000396653 FLT4P35916 1363 aa22.32■■□□□ 1.16
AP1S3-202ENST00000396653 CDK12Q9NYV4 1490 aaPredicted RBP22.31■■□□□ 1.16
AP1S3-202ENST00000396653 ZBTB7CA1YPR0 619 aa22.31■■□□□ 1.16
AP1S3-202ENST00000396653 RRS1Q15050 365 aaKnown RBP22.31■■□□□ 1.16
AP1S3-202ENST00000396653 ZNF772Q68DY9 489 aaPredicted RBP22.31■■□□□ 1.16
AP1S3-202ENST00000396653 PHF23Q9BUL5 403 aaPredicted RBP22.31■■□□□ 1.16
AP1S3-202ENST00000396653 BTG4Q9NY30 223 aa22.31■■□□□ 1.16
AP1S3-202ENST00000396653 FBLN1P23142 703 aa22.3■■□□□ 1.16
AP1S3-202ENST00000396653 UNC5CLQ8IV45 518 aa22.3■■□□□ 1.16
AP1S3-202ENST00000396653 IP6K1Q92551 441 aa22.3■■□□□ 1.16
AP1S3-202ENST00000396653 POLKQ9UBT6 870 aa22.3■■□□□ 1.16
AP1S3-202ENST00000396653 USP21Q9UK80 565 aa22.3■■□□□ 1.16
AP1S3-202ENST00000396653 AMPHP49418 695 aa22.29■■□□□ 1.16
AP1S3-202ENST00000396653 ATRNO75882 1429 aa22.29■■□□□ 1.16
AP1S3-202ENST00000396653 HOXC9P31274 260 aa22.28■■□□□ 1.16
AP1S3-202ENST00000396653 TNNT2P45379 298 aaPredicted RBP22.28■■□□□ 1.16
AP1S3-202ENST00000396653 EMILIN1Q9Y6C2 1016 aa22.28■■□□□ 1.16
AP1S3-202ENST00000396653 INSRP06213 1382 aa22.27■■□□□ 1.16
AP1S3-202ENST00000396653 RALBP1Q15311 655 aa22.27■■□□□ 1.16
AP1S3-202ENST00000396653 AXIN2Q9Y2T1 843 aa22.27■■□□□ 1.16
AP1S3-202ENST00000396653 ERBB3P21860 1342 aa22.26■■□□□ 1.15
AP1S3-202ENST00000396653 RGS17Q9UGC6 210 aaPredicted RBP22.25■■□□□ 1.15
AP1S3-202ENST00000396653 TRPC5Q9UL62 973 aaPredicted RBP22.25■■□□□ 1.15
AP1S3-202ENST00000396653 VPS72Q15906 364 aa22.24■■□□□ 1.15
AP1S3-202ENST00000396653 WDR17Q8IZU2 1322 aa22.24■■□□□ 1.15
AP1S3-202ENST00000396653 WNK3Q9BYP7 1800 aa22.24■■□□□ 1.15
AP1S3-202ENST00000396653 CRB1P82279 1406 aa22.23■■□□□ 1.15
AP1S3-202ENST00000396653 CNGB1Q14028 1251 aaPredicted RBP22.23■■□□□ 1.15
AP1S3-202ENST00000396653 GLI3P10071 1580 aa22.23■■□□□ 1.15
AP1S3-202ENST00000396653 RGPD2P0DJD1 1756 aa22.22■■□□□ 1.15
AP1S3-202ENST00000396653 EVA1CP58658 441 aa22.22■■□□□ 1.15
AP1S3-202ENST00000396653 PPP2R1AP30153 589 aa22.21■■□□□ 1.15
AP1S3-202ENST00000396653 ANKRD24Q8TF21 1146 aa22.21■■□□□ 1.15
AP1S3-202ENST00000396653 STRN4Q9NRL3 753 aa22.21■■□□□ 1.15
AP1S3-202ENST00000396653 PPM1GO15355 546 aaPredicted RBP22.2■■□□□ 1.14
AP1S3-202ENST00000396653 MTHFSP49914 203 aa22.2■■□□□ 1.14
AP1S3-202ENST00000396653 HSP90AB2PQ58FF8 381 aa22.2■■□□□ 1.14
AP1S3-202ENST00000396653 PRKRIP1Q9H875 184 aaPredicted RBP22.2■■□□□ 1.14
AP1S3-202ENST00000396653 QTRT2Q9H974 415 aaKnown RBP22.19■■□□□ 1.14
AP1S3-202ENST00000396653 SPATA31A5Q5VU36 1347 aa22.19■■□□□ 1.14
AP1S3-202ENST00000396653 SPATA31A7Q8IWB4 1347 aa22.19■■□□□ 1.14
AP1S3-202ENST00000396653 COL3A1P02461 1466 aaPredicted RBP22.19■■□□□ 1.14
AP1S3-202ENST00000396653 MYBBP1AQ9BQG0 1328 aaKnown RBP22.18■■□□□ 1.14
AP1S3-202ENST00000396653 LARP1Q6PKG0 1096 aaKnown RBP22.18■■□□□ 1.14
AP1S3-202ENST00000396653 RGPD1P0DJD0 1748 aa22.17■■□□□ 1.14
AP1S3-202ENST00000396653 SPATA31A1Q5TZJ5 1347 aa22.17■■□□□ 1.14
AP1S3-202ENST00000396653 CSB-PGBD3P0DP91 1061 aa22.17■■□□□ 1.14
AP1S3-202ENST00000396653 GJD4Q96KN9 370 aaPredicted RBP22.17■■□□□ 1.14
AP1S3-202ENST00000396653 RBM6P78332 1123 aaKnown RBP22.16■■□□□ 1.14
AP1S3-202ENST00000396653 POTEAQ6S8J7 498 aa22.16■■□□□ 1.14
AP1S3-202ENST00000396653 TOM1L2Q6ZVM7 507 aa22.16■■□□□ 1.14
AP1S3-202ENST00000396653 CARD10Q9BWT7 1032 aa22.16■■□□□ 1.14
AP1S3-202ENST00000396653 NCAPD2Q15021 1401 aa22.15■■□□□ 1.14
AP1S3-202ENST00000396653 THSD7AQ9UPZ6 1657 aa22.15■■□□□ 1.14
AP1S3-202ENST00000396653 THRAP3Q9Y2W1 955 aaKnown RBP22.15■■□□□ 1.14
AP1S3-202ENST00000396653 ANP32CO43423 234 aa22.14■■□□□ 1.13
AP1S3-202ENST00000396653 LTV1Q96GA3 475 aaPredicted RBP22.14■■□□□ 1.13
AP1S3-202ENST00000396653 CCDC9Q9Y3X0 531 aaKnown RBP22.14■■□□□ 1.13
AP1S3-202ENST00000396653 EIF4A2Q14240 407 aaKnown RBP22.13■■□□□ 1.13
AP1S3-202ENST00000396653 CFAP53Q96M91 514 aa22.13■■□□□ 1.13
AP1S3-202ENST00000396653 PARP4Q9UKK3 1724 aaKnown RBP22.13■■□□□ 1.13
AP1S3-202ENST00000396653 BARGINQ6ZT62 677 aa22.12■■□□□ 1.13
AP1S3-202ENST00000396653 TCP11L2Q8N4U5 519 aa22.12■■□□□ 1.13
AP1S3-202ENST00000396653 RXRBP28702 533 aa22.11■■□□□ 1.13
AP1S3-202ENST00000396653 NLRP2Q9NX02 1062 aa22.11■■□□□ 1.13
AP1S3-202ENST00000396653 DISP2A7MBM2 1401 aa22.1■■□□□ 1.13
AP1S3-202ENST00000396653 IGSF1Q8N6C5 1336 aa22.09■■□□□ 1.13
AP1S3-202ENST00000396653 DIAPH1O60610 1272 aaKnown RBP22.09■■□□□ 1.13
AP1S3-202ENST00000396653 IL13P35225 146 aa22.09■■□□□ 1.13
AP1S3-202ENST00000396653 ONECUT3O60422 494 aaPredicted RBP22.08■■□□□ 1.13
AP1S3-202ENST00000396653 NBPF6Q5VWK0 638 aa22.08■■□□□ 1.13
AP1S3-202ENST00000396653 NBPF4Q96M43 638 aa22.08■■□□□ 1.13
AP1S3-202ENST00000396653 LRRC37A3O60309 1634 aa22.08■■□□□ 1.13
AP1S3-202ENST00000396653 EYA1Q99502 592 aa22.07■■□□□ 1.12
AP1S3-202ENST00000396653 CDCA7Q9BWT1 371 aaPredicted RBP22.07■■□□□ 1.12
AP1S3-202ENST00000396653 USP35Q9P2H5 1018 aa22.07■■□□□ 1.12
AP1S3-202ENST00000396653 PLEKHG2Q9H7P9 1386 aa22.07■■□□□ 1.12
AP1S3-202ENST00000396653 RGS12O14924 1447 aa22.06■■□□□ 1.12
AP1S3-202ENST00000396653 BRWD3Q6RI45 1802 aa22.06■■□□□ 1.12
AP1S3-202ENST00000396653 KDRP35968 1356 aa22.04■■□□□ 1.12
AP1S3-202ENST00000396653 PKD1L3Q7Z443 1732 aa22.04■■□□□ 1.12
AP1S3-202ENST00000396653 FAM98CQ17RN3 349 aaKnown RBP22.04■■□□□ 1.12
AP1S3-202ENST00000396653 DIEXFQ68CQ4 756 aaKnown RBP22.03■■□□□ 1.12
AP1S3-202ENST00000396653 NUDCQ9Y266 331 aa22.03■■□□□ 1.12
AP1S3-202ENST00000396653 MEGF6O75095 1541 aa22.02■■□□□ 1.12
AP1S3-202ENST00000396653 IL2RBP14784 551 aa22.02■■□□□ 1.12
AP1S3-202ENST00000396653 SHANK3Q9BYB0 1731 aa22.02■■□□□ 1.12
AP1S3-202ENST00000396653 OVOS2A0A0G2JMS6 1433 aa22.01■■□□□ 1.11
AP1S3-202ENST00000396653 TNS2Q63HR2 1409 aa22.01■■□□□ 1.11
AP1S3-202ENST00000396653 USHBP1Q8N6Y0 703 aa22.01■■□□□ 1.11
AP1S3-202ENST00000396653 SEPT12Q8IYM1 358 aa22■■□□□ 1.11
AP1S3-202ENST00000396653 RAPGEF4Q8WZA2 1011 aa21.99■■□□□ 1.11
AP1S3-202ENST00000396653 U2SURPO15042 1029 aaKnown RBP21.97■■□□□ 1.11
AP1S3-202ENST00000396653 TATP17735 454 aaPredicted RBP21.97■■□□□ 1.11
AP1S3-202ENST00000396653 A0A0G2JS52 829 aa21.96■■□□□ 1.11
AP1S3-202ENST00000396653 MYT1Q01538 1121 aa21.96■■□□□ 1.11
AP1S3-202ENST00000396653 SULT6B1Q6IMI4 303 aa21.96■■□□□ 1.11
AP1S3-202ENST00000396653 DDB1Q16531 1140 aa21.95■■□□□ 1.1
AP1S3-202ENST00000396653 AEBP1Q8IUX7 1158 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms